Amar044377.1
Basic Information
- Insect
- Anisolabis maritima
- Gene Symbol
- Zbtb41
- Assembly
- GCA_010014785.1
- Location
- JAAAKE010007324.1:99946246-99953702[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.00028 0.093 15.1 2.8 1 20 51 70 51 73 0.96 2 15 2.5e-05 0.0083 18.3 1.0 3 23 81 101 79 101 0.96 3 15 7e-05 0.023 16.9 0.2 1 23 209 231 209 231 0.98 4 15 0.06 20 7.7 0.6 1 23 237 260 237 260 0.89 5 15 0.0011 0.37 13.2 5.2 1 23 293 315 293 315 0.97 6 15 0.0001 0.034 16.4 0.2 1 23 325 347 325 347 0.97 7 15 0.0081 2.7 10.5 2.4 1 23 353 376 353 376 0.97 8 15 0.00022 0.074 15.4 4.2 1 20 383 402 383 405 0.94 9 15 2.2e-05 0.0074 18.5 4.4 1 23 411 433 411 433 0.99 10 15 0.00086 0.28 13.5 0.2 3 23 440 460 439 460 0.97 11 15 0.00032 0.11 14.9 2.0 1 23 469 491 469 491 0.97 12 15 0.0027 0.89 12.0 0.2 3 23 499 519 497 519 0.97 13 15 6.2e-06 0.0021 20.2 0.2 1 23 525 547 525 548 0.95 14 15 0.00019 0.062 15.6 0.7 1 23 562 584 562 584 0.96 15 15 0.00014 0.048 16.0 0.2 1 20 943 962 943 965 0.94
Sequence Information
- Coding Sequence
- ATGATCCCAAACAATCAGCCTAGAGCAGCCATCGCCAATAAGTGTCTGACTCTTCCTAATGACGTCAAATTGGTGTTGAATCAAATCTGGGAAGACGAGGTGGAAATCCCTTTGCCCCAAGACCAGGATTCGTATGCCGCGTCTCGTCCCTATCCCTGCGATTTCTGCTCTCGGCGATTTAGTAAAAAAGCAAATCTAATGAATCACATGGTGTGCCATCAAGTGGAGCGACCACATCTTTGCAATCTCTGCGGCGTGCGCTATCGCCGAAAAGCCGAACTTATTACTCATATGAAAATCCATGCCTTTGCACCAGGGAAGGGAACAGTGAGTGATGaggatgatgacgatgatgacgatAACGAGGATGGCGTATCAATTGCCATAGAACATAAGaaacgaacaaaaaataaatcatctaaaCGAGGTCGTAAAAGTCTAAATCACCAtgccaaatataataataatgaaaatttcatgaataataaatctccgaaatattcgaaaaaaaattcttatacaaCATCATATCGAGCAGAGAAATATGAAGTCGAAGATCCTCTGAAGGCGATTTCTGACTTGCCTCTGCAACCTCGCTGGCCGATTACCGATCCCACTCGGCCTTATGTCTGTCAGCATTGCGGCGTCGGCTTCGCCAGGGAAAAAGCTCTCATTTCACATTCTCGGATCCACGCCGGGGACAGTCCCTTCGAGTGCAACACGTGCGGCGAAATGTTCTGGGATATCACTATGCTACGTAATCATGCGCATCTCAAGCATGGCATCCGTTTGCCAAATAATATCCAAGAAATCGATGGAAACGAACAGCCAGAGTATTATCAAAACGATGATAACAATAGCGAGGAGCTGAACGATTTCCATTGTGACATGTGTGGAAATGTATTTCATCGTTACGATTTACTCAAAAGGcacaaaagattacattTGAAAGTAGAATCGGGCGATTCTGTTTTTAATTGTGACTTGTGTGAGGAGAATTTCTCCAACCAAGAGGATCTATTCGCCCATGTGGAATCGCACCCAGGCCACCATTCTCATCGATGTATGCTCTGCGGAGAATGTTTCTTAGATTCTGCTACACTTGCCCAGCATGTTCGTCGACGTCATGCCAAGGAATTGCCGGCCCATACATGCACGCTCTGTGGTAAAACATGCAAGGATAAGCGTTCTTTACAGAAACATTTATGGATCCATTCGGCGGATAAGAGTTACACATGTTCAACATGTGGCAAACGTTTTCATAGTCGTCCTCGTCTTAAAAGgcACATGATGTCCCATCGAGACAAGATGGTCGCATGTGACGAATGCGGCAAGGAATTCCCAGATGGGCGAGCGTTAATCAATCATCGACACAGTCATAATAAGGATCACACTTCGAGACAGTTTCATTGTTATGAGTGTGACAAGTCATTTGGAAGTCGCAGCAGTCAACAGATTCATGCACGAATTCACACAGGGGAACGTCCATATGGATGTCGTTTTTGTTGGAAGGCTTTCGCCGATGGAGGCACGCTACGAAAACATGAACGGATCCATACCGGAGAGAAGCCCTACGCCTGTCCTATTTGCCCAAGGGCCTTCAATCAACGGGTTGTACTCCGAGAGCACATTCGTTCTCATCATTCGGGTCCAGAGATGAGTTCGGGAACTCATTCACCGATCTATGTCTGCAAAGTGTGCTCAGGCACGTTCACACGATCCGACGAGCTCTGTTTGCATTTGATCGCGCACAGTGACGAGAATACAGCCAAGCATAGAATGACTCGTATTGGTCCAAGGAAATACAAACGTCGAAGACGCCTAAATGCCCATGAATTGAGACTTTTTTCAGAGAGTCTCGAGCAGGAGCAGGACGATGCTTATCCGAACGACTTCGCCGAAAGTTATGCTAATAATGACAGGGAGGAGGAACTGGACGATTCGGACGAGGATTATGGGAAACGAAAGATCACCaaacgaaaatataataaatcgagATCCTCTCGACATCATGTAAGTGATAATTTCGAATCGGttgtaaaatcatttgaatcggttatggaaaatttcaattcaattgttgATAGTTCAAAGTCGGATGCCAGGAAAGCGAAAATGAAACGAAAATATCACCGgatgaaaaagaatgaagaaccACCCCCACCACCTCcagcaccaccaccaccacgaTCCCCGTCGCCGCCGATGTCGCCTCTCCATCAACAGCACCAGCAGCAACCGCAGCAGGGCCTCGCAAGCGGCGGTTTCGTCAAAAGCAATCGACCGATGGGCGAAGGTCGAATTCGACCACGAACTAAAAACGTTACGTTAAGTACGCTAGCAGCTCTCAAAGCCGTTAACGTGATCTCGCCCGGTGATCCCGCCTCAGCTGATCTGATCATCCGTGGCGGGCCACGCACCAAAAACGTTAACTATCACAACGTAAAAATGGTAAAACTCGAGCCGGCCACTTTTGACGATTATAAACCAATACTATCAACTCTGTTAACTACTACATCTCCAGCGCCATCTCCGCCACTAGAAACAGAAACATCGGCGACGACATATGAACCCCCACATATTCAATTCGTCGGCAAAGTTGAAGTTGAAGATACTACCGAAGTGGAAGTCACAACAGAAGAACATCATCCTCTGGCAGAGGACAAAAGGCCGCTGACGCCGATAGAGGATAACCCAATCACCGACGAAATCGTTAATAGCTTTAAAAACGTACAtagtaaaaaacataaaaataaacaatcgaaaagcaaaaaattagaagcagcaacaacaacagaaATCGATTCATCAATTGTGAAATTAGAATACAAATGTGAAATGTGTAGTGAAACATTCACAAAAAGATCCGACTTGCTTATACATGTtccaattcatatttaa
- Protein Sequence
- MIPNNQPRAAIANKCLTLPNDVKLVLNQIWEDEVEIPLPQDQDSYAASRPYPCDFCSRRFSKKANLMNHMVCHQVERPHLCNLCGVRYRRKAELITHMKIHAFAPGKGTVSDEDDDDDDDNEDGVSIAIEHKKRTKNKSSKRGRKSLNHHAKYNNNENFMNNKSPKYSKKNSYTTSYRAEKYEVEDPLKAISDLPLQPRWPITDPTRPYVCQHCGVGFAREKALISHSRIHAGDSPFECNTCGEMFWDITMLRNHAHLKHGIRLPNNIQEIDGNEQPEYYQNDDNNSEELNDFHCDMCGNVFHRYDLLKRHKRLHLKVESGDSVFNCDLCEENFSNQEDLFAHVESHPGHHSHRCMLCGECFLDSATLAQHVRRRHAKELPAHTCTLCGKTCKDKRSLQKHLWIHSADKSYTCSTCGKRFHSRPRLKRHMMSHRDKMVACDECGKEFPDGRALINHRHSHNKDHTSRQFHCYECDKSFGSRSSQQIHARIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACPICPRAFNQRVVLREHIRSHHSGPEMSSGTHSPIYVCKVCSGTFTRSDELCLHLIAHSDENTAKHRMTRIGPRKYKRRRRLNAHELRLFSESLEQEQDDAYPNDFAESYANNDREEELDDSDEDYGKRKITKRKYNKSRSSRHHVSDNFESVVKSFESVMENFNSIVDSSKSDARKAKMKRKYHRMKKNEEPPPPPPAPPPPRSPSPPMSPLHQQHQQQPQQGLASGGFVKSNRPMGEGRIRPRTKNVTLSTLAALKAVNVISPGDPASADLIIRGGPRTKNVNYHNVKMVKLEPATFDDYKPILSTLLTTTSPAPSPPLETETSATTYEPPHIQFVGKVEVEDTTEVEVTTEEHHPLAEDKRPLTPIEDNPITDEIVNSFKNVHSKKHKNKQSKSKKLEAATTTEIDSSIVKLEYKCEMCSETFTKRSDLLIHVPIHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -