Amar042490.1
Basic Information
- Insect
- Anisolabis maritima
- Gene Symbol
- -
- Assembly
- GCA_010014785.1
- Location
- JAAAKE010007324.1:33419152-33429320[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 29 0.00034 0.11 14.8 1.3 1 21 180 200 180 201 0.93 2 29 0.00063 0.21 13.9 3.0 1 23 211 233 211 233 0.94 3 29 0.00019 0.063 15.6 4.0 1 23 254 277 254 277 0.95 4 29 0.0023 0.77 12.2 4.3 2 23 284 306 283 306 0.96 5 29 0.00013 0.042 16.1 0.7 1 23 343 365 343 365 0.98 6 29 1.2 3.9e+02 3.7 1.5 1 23 452 475 452 475 0.92 7 29 0.011 3.5 10.1 0.2 2 23 540 562 539 562 0.95 8 29 0.018 5.9 9.4 0.2 3 23 570 591 568 591 0.95 9 29 0.23 76 5.9 1.9 1 23 600 622 600 622 0.97 10 29 1.1e-05 0.0035 19.5 1.0 1 23 675 698 675 698 0.96 11 29 3.9 1.3e+03 2.0 0.4 1 23 720 743 720 743 0.90 12 29 0.93 3.1e+02 4.0 0.0 2 23 783 805 783 805 0.90 13 29 0.008 2.7 10.5 1.0 2 23 812 834 811 834 0.95 14 29 0.00018 0.06 15.6 0.3 1 23 842 864 842 864 0.97 15 29 0.00012 0.04 16.2 0.5 2 23 920 942 919 942 0.95 16 29 0.00026 0.088 15.1 2.2 2 23 949 971 948 971 0.96 17 29 2.4e-05 0.008 18.4 1.0 1 22 989 1010 989 1010 0.96 18 29 0.0019 0.62 12.4 1.2 1 23 1028 1050 1028 1050 0.99 19 29 0.22 71 6.0 0.1 1 23 1053 1077 1053 1077 0.91 20 29 0.13 43 6.7 0.4 1 23 1083 1107 1083 1107 0.97 21 29 0.00071 0.23 13.8 0.5 2 23 1115 1137 1115 1137 0.96 22 29 0.0029 0.97 11.8 0.3 1 23 1143 1166 1143 1166 0.97 23 29 5.6 1.8e+03 1.5 1.4 2 19 1175 1192 1175 1197 0.81 24 29 0.00077 0.26 13.7 0.3 1 23 1201 1224 1201 1224 0.96 25 29 0.00014 0.047 16.0 0.2 1 23 1282 1305 1282 1305 0.97 26 29 0.00012 0.039 16.2 2.3 1 23 1312 1336 1312 1336 0.91 27 29 0.15 49 6.5 2.3 3 23 1563 1584 1561 1584 0.94 28 29 9 3e+03 0.9 0.3 2 23 1591 1613 1590 1613 0.93 29 29 0.00026 0.087 15.1 0.6 1 23 1661 1683 1661 1683 0.97
Sequence Information
- Coding Sequence
- ATGACGACCAAAATGGCTTTAAAGgccaataataaaagttatatggaTCTATGTCGATTGTGTGCCAATCAGGAGTCCATCAAAATGGATATCTTTAGTATAGAAGGGAAAGAGAAACAACTAGTAGAGAAAATCGAGACATGTTTGCCCTTTCAGGTGGACGAGGCAGACAAGTTACCCCGTCATCTTTGTTATCGATGTATGCTCCAACTAGAGAATTTCTATGATTTTCACAAAGGCTGTATTACAGCCCTCGCCTGGTTCCAGAATTGCATTCGTCAGACCGAATTCGAACAAAATCAACATGCGataaatgtaAAATTCGATGATGAGTTAGAAAAAGAATCACCAACCAGTCCTAAAAGTAATTCTTCTTTATCAAGGCCACCTTCGTCACTCGAAGAGGATTGTGAAATTAAAGATCGACTGaaaccagaagaaaatgaatatacaaCGGTTGAGAGTGCACAAATTAGAGCCGTGACAGAAagattGAAATTGAAGCCAAAACGACGAATTTCTGATCCAACTACTCGACATGAATGTTCACATTGTAATCGAAGTTTTATATCAAAAGGAGCCCTTACATTACATTCaaggaattgtAATCAACAGGGAGAATACAATCTCTATCCTTGTACGATTTGCGAACGGATTTTCTCAAGTAAAGGTCATCTTACTCTTCATTGCAAAATTCATGATGGAAATAGTGACACAGCATCTGCAAAAAAGATAACATCTGTTGATGGTTATAGACAATTTAAATGTAACCTTTGTGATAAATCCTATTCAACATCAAAACATTTGTGGGGACATGTGAGTGTTTGCCATCGGGGAGATCCTATTGTCACTTGTTGTTTCTGTTCCCGTATATTTTCCACAAAAACAAACTTAGAAGAACACAAAAGATCCAAACATGCCcttgatttattaataggtcCACAAAATGATGAGCAAATTAATTCAAgttctctttcatttaaagaaGATAAGATTAAAGAAAGAGACAATGGAGAACAACCATCCTACACTTGTAATATCTGCTTTGGAGTATTCAAATCtaattctgatttaaatttacattccaTGACTCATGTTGATAACAATCAAAGTTTATTAAAGCAAACATTGTTACGATGTGAGGTCAAACGACATTTAAATGATACTGATCAAGATTATCCTCAAAAAAGGCCTTTATTTGAATCTAATTCAGCTTCTAATCgtagaaaaaattctcaaccACGAAAAATAGCTCGCACTGAAGGGGAAATGCCTGTAATGAGTTCAGATGAAAGTGATTTCTCTATATTTACTGCTATTGAAGATGTTGAGAATGTGGAAAAACGTCCGGGCTTTTCATGTTTACTTTGTGATCAAAGCTTTTTAAATCGACCGGCTTTAAGTCTTCATTTCGATACCTGTCATGGGATTGATTATTCTGAAATTATGGACGGTACAAACGGTAAAGGAATTTCTAGTTTAGAAGATAAAGAGGAAACAACAAAACCtcaaaatgatgataataatgttCCAAGTCCTGATCTTGCTGATGATTTAATGGAATTGGTTGAAGATGATATAGATCAGAAATCTTTCGGATTAAAAGATCACACCGTGAGTTGTCAAGTGTGTATTAGAGAATTCAATGATCGAGCAAGTCTCTGGCTTCATATGAGGTATACTCACAAAGAACAAGCGTCTTTAGCCTgtggaatttgtttaaaaatctgtGAGGATAATGAAGATCTCAAAGCTCATTGGCAAAGTAGACATGATAAACAGACTGAAATGCGCCGATATAGTTGCACAATGTGCGGAAGACAACATGATAGTCGTAAGAAACTTATTACCCACGTATCAATACACAATTTGGAAGATGGCACTGGTGGAAATTATGATCCTGAAACGCTTGTTATTCAAAATTCAGGCTATCACCTAGTAAGTCGTCCAGAAGATGAAAGCCCAATGctatttgaatcaaaaattaCTTCAACTCTAATTGATTTTGGATCCCCACAATTATACAGgtgtgaaatttgttttaaagctTTTACTTCAGAAAGtagtttattaaaacataaacgaGGTATGCATGGCCGTCCAAATCCAAATGACCCTAATTCATCATTAACGAGTAAAGCAAGTTATCAATTATTCTTCGTTTGCGAAATGTGTGGTTCTTCTCATGGAAGTAAAACAGATCGATGGCGTCATGTTGCAACTGAACATTCCAATGAAACTTCAATTCGTTGTGATTTACCTGGTTGTCAAAAAGTATTTCCCACTCGAGCTCTCTGCCATGAACATTGTCAAATGCATCATCAAGAACAAGGACCCACTCCAAATACATGTGAAATTTGTGGGAAATTATGGGGAACTCGTGTAGATTATTGGAAACATTTAATGGGTGTTCATCCTGATATCGTATCTTTAACATGTGGTGTTTGTTTGAAAATGTTTTGTAATGTCCAAGATTTACAAGAACATGTTAAAAGTCAACATATGCCTTTTACAACGGGTGATTATAATTGTGATGTTTGTGGACGACCATATTCAAATCGTGCGAAAATGTTACGTCATAGGTTAATACACGATGTACCCCAGCTAGAATATGATCTACCTTTACCACGAAATCGATCACGTTctacaaataataatcaagCAAAGGAAGCCTTATGGTGTGAAGCTTGTCcagaaatcaaatttgaaaatcttgCTGAATTGGCTGAACATCGTAAATCAATACATTCCCTTGTTCCATGTGATCTTTGTCCGAAATTTTATGGTCGTAACTCTCATTTATGGAAACATGTCAATCGTGTACATAAAAATCATCCAGCTCTTACATgtcaaatttgtaataaaatatctgCCACAAAAATTCACTTGAAAAATCATATGCAGAGTAAACATCCAACTCTTTCAGAAGATGGTACAAGAGTTGATCCACAGAATGTAAAGGAATATCCGTGTCCTTAttgtcaaaaacaattttatagaagaaTCTTGTTGAAAAAACATATCAAACGTTGCTCTTCAGCAAAacgatcaaaaattaaatccatcgaACAATTACAAGAATATAAATGCGAAGCTTGCAGCAAACTCTTCGTTTCTTTGTCGCGTTTAAGGGAACATCAACGTTATCATCCCACCTATTTATGTGATCTCTGTCctgatatgaaatttattactagtttaaatttaattgaacataTTCGTGAACAACATCCGAATCATCCAGATTTTTACTGTAGTGCAAAAGATTGTACAACAATTTTACGTTCCCGAGCAGATCTTGATACTCACACACAAATGCATTCTAAAACTAAATACCCTCCTACTTGTACTTTATGtggggaaatttttaataacaagccAAGATTATTAAGACATTTAAATTCTTATCATAAATTAGATATTCCCTTTTTCTGCGGCGTCTGCTTTCTTAGGTTTCCAAATGCAGAAGAATTAATGGAACATACCAAAACAAACCATcctttagaattaaaagaacCTAATACATGCCAAATTTGCGCTAAAGTGTATTCTAGCGTGTATAAAGTTTTAGAtcattgtaataaatatcatttaaattaccATGTGTGTAAAGAGTGTTTGTTAGTATTTAGAACTAAAGAAGATTTAGACCAACACTTATTAGTTCCAcatgacaataataaaaaacataaagaagaagtggatgaagaagaagaagatgatagTCCACCTAAATTACGAAATCAAGAAGCGGAAGCAACCATCAGAGATGACTCTGATGAAATGCCAATCTTACAAAAGATAACTGAAATTCAATACCCAGAATCTCGACCAAAACGAAATTATACATGTCCAATTTGTGAATTAACCTTCAAGTCTCCTTCTGAAGTTTTAGAACATAAAAATTCGAAACATAAACCGCCACCTGGACCATATCATTGTGAATTatgcgaaaaatatttttcaaataacagcAGCTATACTAAACATATTCAATCACCTCTACATTTGAATAgacttattaaacaaaaagaagaagaggataaacttgaaaaagaaaaagatgctcAAGATgcgttgaaaaatttcattgaagaagagaagattgaaaataataaagtgcCTTATTctccagaaaatataaaagaagtagAAGAATCGGTAGAAGAATCGGTAGAAATTGAACAAGAAGAAGTAGAAGAGGAAGATGAtgaagaggaggaagaagaagtggagggggaggaggaagaagatgaagatgaaggtGTAACTGTAAACGAAGAAGAAATAGAAgtggaagaggaagaagaggaagaagaagaagaagaggaagaaggggATGAACTTAGTGAAGCTGAAGCCGGAgatgacgaagaagaagaaaatgaagcaGAAGATGAAGAAGCTGAAGAGGACGATGTTGAaatagaggaagaagaagacgaagatgATGCtgaagaaaatgatgaaactcAAGAtgttcaagaagaagaagaattgggtgaagatgaagaagatgaagaggagGAAATTGATGAAGAGAATATTATCCGTGATATAGAGTTAGATGGCGAAATGCCAATTGCCCAAGAAGTAATGGTAGAGGAAATAGTAGAGCCATCATCTGTGATTGAATTCCCATACAAATCAAATACATTAACTCTCGCTGATAGTAGTGGGTTATTTTGTCGTTTATGTCATAAAATGTTTCCGGGTGGGAAACATTTATGGCAACATGTGATACGTAGCCATCCAAGGGCTGCTGCTGTGACTTGTGGTGTTTGTATGGAAATTTGCGACGACTATAATGATTTATCATTGCATTTGAAGAATATGCATCCAGCATTGGAACAAGAGACCAACAATTTCACTTGCAACATTTGCGGAAGATATCACCATGCTAAGTGCCAATTATTGGCCCATACTGCGATTCACACGATTCTTGGTCCAGAGGAAGCTCAACAACCTCAAGCCGCTACTCACTCTTGCACACTCTGCAATCGGATTTTTAATAGTGCTCGTGGCCTAGAAGATCATGTTCGCATAcacattgtttaa
- Protein Sequence
- MTTKMALKANNKSYMDLCRLCANQESIKMDIFSIEGKEKQLVEKIETCLPFQVDEADKLPRHLCYRCMLQLENFYDFHKGCITALAWFQNCIRQTEFEQNQHAINVKFDDELEKESPTSPKSNSSLSRPPSSLEEDCEIKDRLKPEENEYTTVESAQIRAVTERLKLKPKRRISDPTTRHECSHCNRSFISKGALTLHSRNCNQQGEYNLYPCTICERIFSSKGHLTLHCKIHDGNSDTASAKKITSVDGYRQFKCNLCDKSYSTSKHLWGHVSVCHRGDPIVTCCFCSRIFSTKTNLEEHKRSKHALDLLIGPQNDEQINSSSLSFKEDKIKERDNGEQPSYTCNICFGVFKSNSDLNLHSMTHVDNNQSLLKQTLLRCEVKRHLNDTDQDYPQKRPLFESNSASNRRKNSQPRKIARTEGEMPVMSSDESDFSIFTAIEDVENVEKRPGFSCLLCDQSFLNRPALSLHFDTCHGIDYSEIMDGTNGKGISSLEDKEETTKPQNDDNNVPSPDLADDLMELVEDDIDQKSFGLKDHTVSCQVCIREFNDRASLWLHMRYTHKEQASLACGICLKICEDNEDLKAHWQSRHDKQTEMRRYSCTMCGRQHDSRKKLITHVSIHNLEDGTGGNYDPETLVIQNSGYHLVSRPEDESPMLFESKITSTLIDFGSPQLYRCEICFKAFTSESSLLKHKRGMHGRPNPNDPNSSLTSKASYQLFFVCEMCGSSHGSKTDRWRHVATEHSNETSIRCDLPGCQKVFPTRALCHEHCQMHHQEQGPTPNTCEICGKLWGTRVDYWKHLMGVHPDIVSLTCGVCLKMFCNVQDLQEHVKSQHMPFTTGDYNCDVCGRPYSNRAKMLRHRLIHDVPQLEYDLPLPRNRSRSTNNNQAKEALWCEACPEIKFENLAELAEHRKSIHSLVPCDLCPKFYGRNSHLWKHVNRVHKNHPALTCQICNKISATKIHLKNHMQSKHPTLSEDGTRVDPQNVKEYPCPYCQKQFYRRILLKKHIKRCSSAKRSKIKSIEQLQEYKCEACSKLFVSLSRLREHQRYHPTYLCDLCPDMKFITSLNLIEHIREQHPNHPDFYCSAKDCTTILRSRADLDTHTQMHSKTKYPPTCTLCGEIFNNKPRLLRHLNSYHKLDIPFFCGVCFLRFPNAEELMEHTKTNHPLELKEPNTCQICAKVYSSVYKVLDHCNKYHLNYHVCKECLLVFRTKEDLDQHLLVPHDNNKKHKEEVDEEEEDDSPPKLRNQEAEATIRDDSDEMPILQKITEIQYPESRPKRNYTCPICELTFKSPSEVLEHKNSKHKPPPGPYHCELCEKYFSNNSSYTKHIQSPLHLNRLIKQKEEEDKLEKEKDAQDALKNFIEEEKIENNKVPYSPENIKEVEESVEESVEIEQEEVEEEDDEEEEEEVEGEEEEDEDEGVTVNEEEIEVEEEEEEEEEEEEEGDELSEAEAGDDEEEENEAEDEEAEEDDVEIEEEEDEDDAEENDETQDVQEEEELGEDEEDEEEEIDEENIIRDIELDGEMPIAQEVMVEEIVEPSSVIEFPYKSNTLTLADSSGLFCRLCHKMFPGGKHLWQHVIRSHPRAAAVTCGVCMEICDDYNDLSLHLKNMHPALEQETNNFTCNICGRYHHAKCQLLAHTAIHTILGPEEAQQPQAATHSCTLCNRIFNSARGLEDHVRIHIV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -