Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_010014785.1
Location
JAAAKE010034208.1:347-2096[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.00011 0.35 12.8 0.0 2 30 143 175 142 183 0.87
2 2 3e-10 9.5e-07 30.7 0.1 2 43 236 282 235 284 0.92

Sequence Information

Coding Sequence
atgaattttttttttttccaggaacAATTCTTAACAATGCAACTTAAAAAGCTTCAGAAGAAACAACGCAAAGGGAAATATGATGGGCCACCTTTGCCACAGAAATTCGAAGTGAATATCCCAACGCCAAGTGTTCTTAATACATTGCCTTTTCAATTGCCCCTTTGGTTGTGGcttgcattaaaattaataacgcGTAGATGTTTAGAACGAAAAGTGAAAGAGGAGCCGCCGGTCttggaagaggaagaggaggaggaaccGGAACCGCCGCCACCGCCACGACGACGGAAAGTCAAACCGTCATTTCCCGAAGCGACCGAGAGCGGGAACAATGGCTGGGAGCCcaaacaaaatcaatataaacCACCTGAGTTTTCAGCTGACTCATCTTCTACTTCCTCTCCCCTCCCACCTGTCACTGGAGGTCTCTGGACTGATGATGATCTTATTGAATTAGCACAAATGGTAAAGAAATATCCACCGGGAACGCCCGCCCGATGGGAGTTGATAGCTGAAACGATGCGACGTCAAGTAGGCGAAGTCGCTTATATggcgaaaaaaatcaaagatgatGGATATAAGATACCAAAAGTCGGTGGGGAGGACGGTGGAATTGACGGAGAGGAGGAGGAATTGATCGAGAAGCCacgtaaaacaaaaacaaggggCGGGAAAGTACAAGGCGAAGAAGGAGGAGGCGGAGGGGAATGGAGTCAAGCACAACAACGAGCGCTTGAGACGGCACTCCAGAAATTCCCTAAAGGATCATGTCACGATCGATGGGATAAAATCTCGCGGTTAGTTCCTGGCAAGACTAGAGATGAGTGTATGTTACGATTTAAACATTTAGCTGAACtcgtacgaaaaaaaaataatccgatTGAGTCTGAAATATTAGAATCTTCTAACGACACTAATAATGATTCCTCATcttctcaaaattaa
Protein Sequence
MNFFFFQEQFLTMQLKKLQKKQRKGKYDGPPLPQKFEVNIPTPSVLNTLPFQLPLWLWLALKLITRRCLERKVKEEPPVLEEEEEEEPEPPPPPRRRKVKPSFPEATESGNNGWEPKQNQYKPPEFSADSSSTSSPLPPVTGGLWTDDDLIELAQMVKKYPPGTPARWELIAETMRRQVGEVAYMAKKIKDDGYKIPKVGGEDGGIDGEEEELIEKPRKTKTRGGKVQGEEGGGGGEWSQAQQRALETALQKFPKGSCHDRWDKISRLVPGKTRDECMLRFKHLAELVRKKNNPIESEILESSNDTNNDSSSSQN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-