Basic Information

Gene Symbol
myb
Assembly
GCA_010014785.1
Location
JAAAKE010020712.1:202-3190[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 0.0056 18 7.4 0.1 1 18 158 175 158 176 0.87
2 7 1.5 4.9e+03 -0.4 0.1 8 21 185 198 183 223 0.80
3 7 0.044 1.4e+02 4.5 0.1 12 43 236 271 233 274 0.83
4 7 4.1e-10 1.3e-06 30.2 0.3 3 43 282 324 281 327 0.95
5 7 1.2e-10 4e-07 31.9 0.3 3 44 334 380 334 382 0.94
6 7 0.0014 4.4 9.3 0.0 1 43 389 431 389 434 0.92
7 7 6.1 2e+04 -2.3 0.0 22 34 461 475 444 485 0.72

Sequence Information

Coding Sequence
aataatgaaatcgaTGATCTTAATGAAGAAttagatttgtatttattggaaaatattctaTCAAAACATCAAAATCTTGTCAAGAAATATAATCTTGGTTCATATATTGATTTAGATGGAAATGAAATTGaacataatcaaaatgaaattgaaaatgatgaaaatttccCTGAAAATGAAGAAGAGTTATATACTGAGGACTCAAAatgtgattttgaaaaattggtgaaaataaataaccttatcaaagagaatgaaaatattcaatcacTTTGTGATTCCTTAAAAACAGAGTTAATTAAACAACTCGGTAAGATTCATGAACAGGACACTACTTATAACAAACTAATATCTGAAACGACTAATATCCAAAGTGCACAAACTgaagagaaattgaataaacatCATCAGAAATTATCAACATCAGAAAAAGACAATCCAAGAATTGATTTGGAAAAACGAAAAACTAATAAGGGTATTTGGACTCCTGAAGAACAATTACGATTACTTTATGCTATTAAAGAAGAagctattactaaaaaaatttctaaagaggataaaattctctataataaaatagagttgTATGAAacgaaattacaatatttattaggtaaatttaaattagatgagagcaaaaaattattgaaagaacgttatatacaattaataaagaatttaaaaaaaaaatatcagcattgtgatttgaaagaattaatttcggagaatgaaaatcaaatagattggatgaaaatttcactgaaagaatttaatgaatttcgtACATCAGAAGAATGTCAAAGTATTTGGGAAAGATGTCTACatcctaaatttaatatctcagaATGGAATCATACGgaggagagaaaattattattattaattgataaatataaagaacaaaattggGATAGCATCGCTAAAGAATTGAACACCGGGCGGTCTTCCTATGCGTGTTTTacacattataatattaatttaaagaagcGTATTTCTATTCCATGGaccaaagaagaagaggagaaattaaaaaaacttgtcgTTACCTATACTTTTGGTAATTCCTATACTCAATGGCCTGCTATATCTGCTTATTTTCCTAATCGgactaaacataaaatttacctACAATGGCAtcgtatacaaaaaaaattagtcaaattgAAGAAAAACTGGTCACTAGCAGAAGATATTACTCTCCTCTCTGCTATGAGATTTGTTGGCCCTTCAATTGGTGATCTTGCGCCTTATCTTAGTCATCGAGAATATAAAcagatcgcACGCCGTTGGAGAGTAGCATTAAGTAATATCCCTAAACGATCCTACTATACTATTGAGGATGATGAAGATATTTggataatatcaaaaaagtacaattttaaatttgaaaaaattttgttacattttcCCGAATTTTCCCggaaaaaacttcttttacGACTCaagttcctaaaaaaatttataaatccatcTAACGGAAATTTAAAG
Protein Sequence
NNEIDDLNEELDLYLLENILSKHQNLVKKYNLGSYIDLDGNEIEHNQNEIENDENFPENEEELYTEDSKCDFEKLVKINNLIKENENIQSLCDSLKTELIKQLGKIHEQDTTYNKLISETTNIQSAQTEEKLNKHHQKLSTSEKDNPRIDLEKRKTNKGIWTPEEQLRLLYAIKEEAITKKISKEDKILYNKIELYETKLQYLLGKFKLDESKKLLKERYIQLIKNLKKKYQHCDLKELISENENQIDWMKISLKEFNEFRTSEECQSIWERCLHPKFNISEWNHTEERKLLLLIDKYKEQNWDSIAKELNTGRSSYACFTHYNINLKKRISIPWTKEEEEKLKKLVVTYTFGNSYTQWPAISAYFPNRTKHKIYLQWHRIQKKLVKLKKNWSLAEDITLLSAMRFVGPSIGDLAPYLSHREYKQIARRWRVALSNIPKRSYYTIEDDEDIWIISKKYNFKFEKILLHFPEFSRKKLLLRLKFLKKFINPSNGNLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-