Basic Information

Gene Symbol
CDC5L_1
Assembly
GCA_010014785.1
Location
JAAAKE010007324.1:60567868-60575994[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8e-17 2.6e-13 51.7 1.9 2 46 9 54 8 54 0.97
2 2 2.7e-12 8.8e-09 37.2 0.2 1 43 60 101 60 104 0.93

Sequence Information

Coding Sequence
aTGCCACGAATAATGATTAAAGGTGGTGTTTGGCGGAACACagaggatgaaaTTCTTAAAGCTGCTGTTATGAAATATGGCAAAAACCAATGGTCTCGTATCGCATCTCTTCTACATAGAAAGTCCTCTAAACAATGCAAAGCAAGATGGTATGAATGGTTGGATCCAAGCATCAAAAAGACCGAATGGAGTAAAGAAGAGGATGAGAAATTACTACACTTGGCAAAACTTATGCCAACACAATGGAGAACAATAGCACCTATCATCGGGAGAACTGCAGCTCAATGTTTGGAGCGTTATGAACATCttctcgaccaagctcaaaagaaagaagaaggagaTGATACCTCTGATGATCCGAGGAAACTTAAACCTGGAGAAATTGATCCGAATCCGGAAACGAAACCTGCTCGGCCCGATCCAAAAGATATGGATGAAGATGaattggaAATGTTGTCGGAGGCTCGAGCTCGATTGGCAAATACGCAAGGAAAAAAAGCCAAACGTAAGGCCagagaaaaacaattagaaGAGGCTCGTCGGCTTGCTGCTCTTCAAaaaaggcGCGAACTTCGAGCCGCTGGAATTGAATTAGcaccaagaaaaaagaaaaaacgtggCGTAGATTATAATAACGAAATACCTTTTGAAAAGAGGCCTGCTCCCGGATTTTATGATACAAGTCAAGAGGAGCTTGATCAAGAAGCTCCGGATTTTGCTAAATTGCGACAACAACATTTAGATGGCGAACTACGACAAGATAAAGAAGAGagagAACGACGTAAAGATAagcaaaaattgaaacaaagaaaagaaaatgatataccAACAGCCTTATTGCAAAATGAAGAGCCGgcaaagaaaagaacaaaattgaTTCTTCCAGAACCAAAAATTTCAGATGAggaaTTGTATCAAATTGTCAAGTTGGGTCGTGCGTCTGAAGCCGCTAGGGAAATTGCGACCGAAGGAGGTTCGCAACCCTTGGATGGCCTTTTGGCTGATTACTCATTAGCCTCTGATGGATTAGGAGCAGGCGGTAAAACCCCTCGCACCCCTGCACCTGCAGTTGACCGAGTCTTACAGGAGGCACAGAATATGATGGCTCTTACTCATGTTGACACTCCACTCAAGGGTGGTCTCAATACGCCTCTTATCGATTCCGATTTCTCTGGAGTCACTCCTCAACGAGAAATTGTGTCTACTAGGAATACTGTTTTGGCAACTCCATTCCGAACTCAACAACACAGTTCAGCTGAtggtgGAGGCTTCAATACTCCGGGATCAGAACGTCGAGATGGGAGTTCACGTCGGAATGGAACGGTTACACCAACTCCTGTCAGAGATAAACTCTCAATCAACCCCGAAGAAGGAATCTCTGCAGGAGATACTCCTCAAgCCAATTATCAACGTCAATTGAAAGCCCATTTAAGAGAGGGTTTGAGCCAATTACCAACCCCTCGCAATGATTTCGAGATCGTGGTGCCTCAAGATGAAGAAATAGCTGAAGAAGAAGTCCTAGCGCCCAGACAAGAAGACCAAGCTGATGTTGATGCACGAGAGGCGGCCGAATTGGAAGCAAAAcGTCTTGAAGAATTGCAAAGTCGTTCTCAGGCTGTTCAAAGAGATCTACCAAGACCTATGGATATTAATATGTCTGTGTTACGTGGACCACAAAATGATGCTCCTCTTACAGATCTTCAAaagGCTGAAGAATTGATCAAATCTGAAATGATAACGATGCTCCACTACGATGCCATGCACAATCCTACAGAAACGCAAGATCCTAAACGACGAGCATACCATGTAGCATATTTAGAAGGTCATCTTTACgaaagtttttcaaaagaagaaatcatccaagcGAAAGAACTTCTTGTTAAAGAGATGGAAGTAGTAAAACAAGGAATGGGTCATGGTGAACTCTCCTTGGAATCATACACCCAAGTTTGGGAGGAATGTCTTTCTCAGGTGCTCTTTTTGCCCGGACAAAATAGATACACTCGTGCCAGTCTTGCTAGTAAGAAAGACAGGTTGGAATCCTTAGAGAAACGTCTTGAACAAAATCGCGCGCATATGACTAGACAGGCAAAGAAGGCCACCAAAATGGAAAGGAAACTTAAGATTATCACTGGAGGTTATCAACAACGAGCTCAGGCGCTTATAAAACAACTACAAGGACTTTATGATCAAATAGAACAAGCTAAACTTGAATTAAGTACTTTCAAATTTCTACAAGAACAAGAAATGGCTGCTTTCCCAAGACGGCTTgagtctttaacGGAAGATGTAAATCGACAAAAAGAACGTGAGAAAActcttcaaaagaaatatgCCTCTCTCCAGAATACCTTAGAAAAACTTCAATTAAACCTTCCAATAGAAGAGGAGGAACCTCAAACATCCTTAATGAACTTCGAGCCTCAAAAACCAGAAGACACACCAGATGAAGAGTCAAGTACTAATAATACAGAACCAGACGACCCCGAACCATCAACTAGCAATCAAGTGCCATAG
Protein Sequence
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSSKQCKARWYEWLDPSIKKTEWSKEEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEHLLDQAQKKEEGDDTSDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIELAPRKKKKRGVDYNNEIPFEKRPAPGFYDTSQEELDQEAPDFAKLRQQHLDGELRQDKEERERRKDKQKLKQRKENDIPTALLQNEEPAKKRTKLILPEPKISDEELYQIVKLGRASEAAREIATEGGSQPLDGLLADYSLASDGLGAGGKTPRTPAPAVDRVLQEAQNMMALTHVDTPLKGGLNTPLIDSDFSGVTPQREIVSTRNTVLATPFRTQQHSSADGGGFNTPGSERRDGSSRRNGTVTPTPVRDKLSINPEEGISAGDTPQANYQRQLKAHLREGLSQLPTPRNDFEIVVPQDEEIAEEEVLAPRQEDQADVDAREAAELEAKRLEELQSRSQAVQRDLPRPMDINMSVLRGPQNDAPLTDLQKAEELIKSEMITMLHYDAMHNPTETQDPKRRAYHVAYLEGHLYESFSKEEIIQAKELLVKEMEVVKQGMGHGELSLESYTQVWEECLSQVLFLPGQNRYTRASLASKKDRLESLEKRLEQNRAHMTRQAKKATKMERKLKIITGGYQQRAQALIKQLQGLYDQIEQAKLELSTFKFLQEQEMAAFPRRLESLTEDVNRQKEREKTLQKKYASLQNTLEKLQLNLPIEEEEPQTSLMNFEPQKPEDTPDEESSTNNTEPDDPEPSTSNQVP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00849749;
90% Identity
-
80% Identity
-