Amar047559.1
Basic Information
- Insect
- Anisolabis maritima
- Gene Symbol
- -
- Assembly
- GCA_010014785.1
- Location
- JAAAKE010000309.1:10993-11424[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.2e-10 3.5e-06 28.5 0.1 1 38 12 48 12 55 0.89 2 2 2.8 1.9e+04 -2.7 0.0 17 22 126 131 120 131 0.65
Sequence Information
- Coding Sequence
- ATGGACATGCAAAAGAAAAGGAGGGGACTTTGGACTGAAGACCAGTTGCAGGGAGCAATGGCAGCCATAGCTGGAGGTATGTCTGTAAGAATGGCATCAATGCGTTTCAAAATTCCGCGAAGGACTTTGCGAAACCATCAAACAACCGGAAAAACGACAAAATCTCTAGGAAGGTCATCCTATTTAACCTCTGTTCAGGAAAAGGAACTCTGCAATAAGATATTAAAGCTAGCACCACAAAGCATGCCCCTAACTGGAAAAGTGATAAGGAATTTAGTGTACACTTTctgtgaagaaaataaaattgataatcctTTTAACAAAGGAGTAGCTGGACGAAAATGGttagatctatttataaaaCGGCATCCTGAAGTTTCTCAAAGAAGGGCTCCAGCCATGAATCCAAGTAAGTCCGCAAAGCTTAATTAA
- Protein Sequence
- MDMQKKRRGLWTEDQLQGAMAAIAGGMSVRMASMRFKIPRRTLRNHQTTGKTTKSLGRSSYLTSVQEKELCNKILKLAPQSMPLTGKVIRNLVYTFCEENKIDNPFNKGVAGRKWLDLFIKRHPEVSQRRAPAMNPSKSAKLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -