Amar038267.1
Basic Information
- Insect
- Anisolabis maritima
- Gene Symbol
- -
- Assembly
- GCA_010014785.1
- Location
- JAAAKE010007324.1:62241432-62251531[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.7e-05 0.25 12.9 0.0 5 40 117 152 114 156 0.86 2 4 2e-07 0.0014 20.2 0.0 15 39 176 200 166 205 0.84 3 4 0.038 2.6e+02 3.3 0.0 20 35 239 254 226 262 0.74 4 4 9.3e-12 6.3e-08 34.1 0.1 4 38 284 318 282 325 0.92
Sequence Information
- Coding Sequence
- ATGGGGGTCTCAAATCatttaccttttaatttaaattcctctcCCACATTACCTCTAATCACCGAAGTCCCTGCGCCTAGTGTTGTTACTGAAATCAGAACTGAAGAATctcaaattaatgatattaactCTAGTGATAGTATTCATGATGAAATTAATCCCAgtgataatttacaaaatagtgaacaaacaattattcatttagaagaaattccTTCCTTTCAAGAAACTGAAGTTGAAGAAACAGAATTAGAACTAGATCTCattcaaaatgaagaaaatcaaacagaagttaaaaaaagaaaactaaagaaAGAATCTACCAAGAAAGTTTATAGtGAACGAGTCATGTTGGATGCTTTAGACGAATTACGAAAAGGGAAATCTATCGTACAAACTTCAAGTGCTCACAAGATACCGAGAAGTACATTATATGTCCGTGCCAAAAGTATGGGAGTACCAACAAATTTATCTCGTCAAGAATATAGCACAGAAAGAGTAAGGCAAGCTTTCAAAGCTTTGGcagGAGGCGCAACTCTTCGTCAAGCaagtgaattatataaaattccaaaaaccgTATTATGGAGACGAGTTCAAAAGGAAGATTCAGTTAAGATGGAAGGAGGACTTATTCACAGAAGAAGTTCCAAACCATCATATGATGCTTCTTCCAAGGCTGAAGCTATCAAAGCACTTGAAAGAGGAGAGAAATTGACAAAAGTTGCTCAACAATATAAGATCCCAAAAGCCActctttttcgagaaaaaaccCGTCTAGTTGAAAGTGGCAAATTACCTTGGAATTCTTTACGCCGAAGAGTTAAAGATGAAGACAGCCGTCTTCAAAGTCGTTTGAATGAGGCTGTACAAGCTTGTAAAGAGGGGAGAATGAGTCATGCTTCTGCTGCTCGCACTTTCCAGattccCAAAACAACTATTTGGCGCCGGATGCAACAATTGGGAAATGCTAGAAAATCGGATTCAAAATGTTCTTTAGAAAATTCAGACTTATCAGATGTTTCCCAAAATATTGGAgatgtttcaaaagaaatgacaCATTTACAAGAGCAGGCCTCTTTTACTTTTGTAGAGgtaCCAGTTTCTTCACAAATTCCCGTCACATATATAGATGAATTTCCTGaagcttctttaataattttaacaaatgaagaAACTGAAAATATTCCTCTCGAAGAAACACATCCAATTATCGTTACGACAgaaaCTGAAATGGAACAAGAAACAAATGAGGATTTAATGGAGtaa
- Protein Sequence
- MGVSNHLPFNLNSSPTLPLITEVPAPSVVTEIRTEESQINDINSSDSIHDEINPSDNLQNSEQTIIHLEEIPSFQETEVEETELELDLIQNEENQTEVKKRKLKKESTKKVYSERVMLDALDELRKGKSIVQTSSAHKIPRSTLYVRAKSMGVPTNLSRQEYSTERVRQAFKALAGGATLRQASELYKIPKTVLWRRVQKEDSVKMEGGLIHRRSSKPSYDASSKAEAIKALERGEKLTKVAQQYKIPKATLFREKTRLVESGKLPWNSLRRRVKDEDSRLQSRLNEAVQACKEGRMSHASAARTFQIPKTTIWRRMQQLGNARKSDSKCSLENSDLSDVSQNIGDVSKEMTHLQEQASFTFVEVPVSSQIPVTYIDEFPEASLIILTNEETENIPLEETHPIIVTTETEMEQETNEDLME
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -