Amar038841.1
Basic Information
- Insect
- Anisolabis maritima
- Gene Symbol
- -
- Assembly
- GCA_010014785.1
- Location
- JAAAKE010007324.1:67288070-67296968[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.6e-12 1.1e-08 36.5 0.0 1 39 180 219 180 223 0.90 2 4 1.1e-13 7.2e-10 40.3 0.1 1 39 234 272 234 276 0.95 3 4 8.7e-19 5.9e-15 56.6 0.0 3 45 291 334 289 334 0.97 4 4 2.3e-19 1.6e-15 58.4 0.1 1 43 341 384 341 385 0.97
Sequence Information
- Coding Sequence
- ATGAGTTGGTGTCCATTTCGGCCCATGGACAAACGATATGGTttggcgcagcagcagcaacaacagcagcagACTTCTGGGCCTCAACATTCCCCGGGGATGCTGATGGGACCATCTATGAATGGCTTAGATGGGGGTGGTGGTGGAGGAAGTACTGGTCCCCCATCCAATGCGGGGACCACTGAACCCGGGCCTGATGTGGATATCCAACCAGAGACACAACCCCCAGGACCTCAGGCCACTCTTGTTGAAAATATGGACCTCCACGAATGCTCACCACATGAATCACAGCACGATATgcaggatacATCAGATTGTCATCAAGAAAACGTGAAAGTGAAATTTGAAACTCTTCGTGCAATGGAACAGGCGGAAACTATCGATATTGACAGCCATATGTCAGAAAGgactGTGGGAGATGAAGATCATTCTATGCACACGATGATGATCACTCCAGAGCTTCTTGGCCTGATACCCTCGAGTTCTGGACACACCGatgtTCCAAGTGAGCCGACTAAAGGAACGCCAAAAACTTGGACACAAGAGGACATGGAATTAGCATTGGATGCTCTAAGAAATCATCATATGAGCCTGACGAAAGCTTCGGCGACGTATGGCATCCCCTCAACAACACTCTGGCAACGAGCGCATCGTTTGGGAATTGACACACCAAAAAAAGAAGGTTCCACCAAAAATTGGACCGAAGATAATCTCAATAGTGCTTTAGAAGCTTTAAGAACAGGAACGATATCTGCAAATAAAGCCAGTAAAGCTTATGgtattcCTAGCAGCACTCTTTATAAAATAGCACGTCGAGAAGGAATTCGTTTATCTGCGCCTTTTAATGCTGCGCCAACTACTTGGAATTCGGATGATCTAGAACGAGCCCTTGAATCAATTCGAAGTGGTCAAACATCTGTACAAAGAGCTTCTACTGAATATGGAATTCCCACCGGAACTTTATATGGGCGATGTAAAAGAGAAGGCATTGAATTGAGTAGATCGAATCCAACTCCCTGGTCAGAGGATGCAATGACAGAAGCTCTTGAGGCGGTCCGAATTGGTCACATGTCCATCAATCAAGCGGCAATCCATTATAATCTTCCATATTCTTCTTTATACGGCCGTTTTAAACGAGGCAAATATGAAGCTGAAGGCCTTCACGCAGACGATATTCGACAACAGCAGCCACAACACCCAAATACGTCACCACCACCTCCTCCACCTCCACAAATAATGGTACTCCAATATCAACAACAACCAGCACATGCAATGTTCCAACAGCACGCGGCCAGCTGA
- Protein Sequence
- MSWCPFRPMDKRYGLAQQQQQQQQTSGPQHSPGMLMGPSMNGLDGGGGGGSTGPPSNAGTTEPGPDVDIQPETQPPGPQATLVENMDLHECSPHESQHDMQDTSDCHQENVKVKFETLRAMEQAETIDIDSHMSERTVGDEDHSMHTMMITPELLGLIPSSSGHTDVPSEPTKGTPKTWTQEDMELALDALRNHHMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGSTKNWTEDNLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLSAPFNAAPTTWNSDDLERALESIRSGQTSVQRASTEYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRIGHMSINQAAIHYNLPYSSLYGRFKRGKYEAEGLHADDIRQQQPQHPNTSPPPPPPPQIMVLQYQQQPAHAMFQQHAAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -