Aque007692.1
Basic Information
- Insect
- Andricus quercuspetiolicola
- Gene Symbol
- -
- Assembly
- GCA_035222095.1
- Location
- JAWWEA010000021.1:43029697-43039871[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.084 26 7.7 1.5 2 21 96 116 95 117 0.94 2 21 0.00013 0.041 16.5 1.2 1 23 125 148 125 148 0.96 3 21 0.053 16 8.4 2.7 1 20 220 240 220 245 0.93 4 21 0.00099 0.3 13.8 0.2 2 22 301 322 300 322 0.94 5 21 1.7 5.2e+02 3.6 3.2 2 23 331 352 330 353 0.94 6 21 0.0078 2.4 11.0 1.5 2 20 404 422 404 424 0.94 7 21 1.5 4.6e+02 3.8 0.9 1 15 432 446 432 455 0.82 8 21 0.017 5.2 9.9 0.3 2 21 518 538 517 539 0.93 9 21 0.013 4 10.3 5.6 1 23 556 578 556 579 0.96 10 21 0.13 39 7.2 1.2 3 21 653 672 651 673 0.94 11 21 0.027 8.3 9.3 0.1 1 21 773 794 773 795 0.90 12 21 0.0017 0.52 13.1 6.4 1 23 803 826 803 826 0.97 13 21 0.35 1.1e+02 5.8 0.1 3 21 926 945 924 946 0.90 14 21 0.4 1.2e+02 5.6 6.4 1 23 954 977 954 977 0.96 15 21 0.00078 0.24 14.1 3.1 1 21 1138 1158 1138 1159 0.96 16 21 0.0086 2.6 10.8 1.0 1 21 1199 1221 1199 1222 0.94 17 21 0.028 8.5 9.2 4.0 1 23 1230 1253 1230 1253 0.95 18 21 0.0023 0.69 12.7 0.3 1 21 1292 1314 1292 1315 0.96 19 21 0.18 56 6.6 4.8 1 23 1323 1346 1323 1346 0.95 20 21 5.8e-05 0.018 17.7 0.3 1 21 1389 1409 1389 1410 0.95 21 21 0.22 68 6.4 3.4 1 23 1418 1441 1418 1441 0.97
Sequence Information
- Coding Sequence
- ATGACCTCATTGGCCTGTTCGCGTATTACTTGCCCCGTGGACCAGTATGGCGAGTACATGTTTGTTGGCGAAGGGGACCAAGCCGAGGTTGTATGGGAATGCATAAATATATCTGATGAAAATGTAGAAAGCATCGCTAACCGGACAGATGAAATTTTGCGCGAAGGGAAACTAgcaaagagaaataaaaaaagaagccaTCCAGTCAGCGAACCCCAGGTCAAGTACCTAACAAGATCTCGCTTGCGGTTACCAGAAGagtcgacaaaaaataaaaaagttcttgaATGCCCCAACAAGTGTGGAAGTTCCTTTTTCTACCAGCACACTCTAGATAAACATGTTCGTCACATTTGTGATCAACCCATGAGATACAAGTGCCCGTATTGTTCTCTTGTCTCTAGAAACCGTAACAACCTTAACGTCCACATAAAATTCCGTCATCCCGGGTACAAGAATTACGTGATTGACACCTATATCGGAAAGAATGAACCACTTTTTGAAGATGAATATGATACGTCTTATGAGCAGCACATTGATCACTCTTGGAACGAAGAACACGAGATCAAGATTCTAAGCGTCTCCAGCCTTGCAAAGTCTGAAGATATCAAACacgaatttgaagatttcaaggacgAATCTATTATAAGCAAAAGATTCTCTTGCCCCAACAACTGTGGTAGTTCATACAAGCACGAATACACTCTAAAAGCTCATGTGGAGTTTGCCTGTCACCAAAATCAGGCACTGAACAACTTGCACCTGGAAGAGGAGGAATCAGAGCCTGGAATGAATGACACGACAATGATGGAAGTTACGAAGTTTGAGACTCCTGAGGAATTGCTGAACCCCATGGCACTTGCAGAATCTTCAGAGTTTAAAAATGAAGATGGTAAATGGGTTTGTCCCAAAAGTTGTGGAAGTACCTTCAGCACTCGAGGTAATTTGAATTACCATCTGCGTACATTGTGTGGAGTTGAACCAAGATTGGAGTGTCCATATTGCTCCCACCGCATGAAACAGCCTTCTAATGGCTTCACTCACGTCAAAACTCATCACCCTGATGCTCAGCTCTGTTTGGTAGATACCGTGACAGGTGAAATTGTTAGACGAAAGAAAGACTTGGCAAACGCTGATATGACAAACAGCGAGAACTCTACACCTAAAGTTTCCGAGTCTAGAAAAATCTCTCCAACAAAGCTGGCAAGAACTTGTCAGAGCTGTGGAAAGGTATTCAAATTACATCATACCTTGTCAAGACATCTTGCTGAAGGCTGTGGACAACCACCTCGTTTCAAATGTCCCTGGTGCGATTACCAAGTAAGGAGACTTTCATACGCTTTCTTCCACGTGACAAAGAATCATCCAGGCTTGAAGGTCTACATGGTGGATTTGCTCACTGGAGAAAGCATCACCGATTCCACTCAGATAAAAAAAGAAGCCGTCGAAGATGTTAAGGAAGAGAAGCCACTTACTCCTAATCCAGTACACTCTTTAAGACCCAAGAGAGCCCAGACTTCTGTACCTGCTGGTCTTCAGAAAAAGAAATTGATGTGTCCAAGAGGCTGCGGTCAGTACTTCTTCTTTAAACCAAGTCTTCAAAAGCATATTAAATACAAATGCAGAAAAACTACTAAACCTTTCCAAAGCACAGAATGTGCTCGATTCAAATGTTCCTACTGCGTCAATAGTTTTGTTCATCGTACGAGCGCCCTTAGACATCTAAGAACCCATCATCGCGGGAAGACAAAGATTGTGATTGATACCCATGCGGAGGAAATTGTGTCCGAAACTTCTGCAGCAAAAGTGCTTGAAAATAATCAGGAGAGAAAGACTCAAGCGCGGATTTTAAAGACTCCGAAGGAGAAAACCGATAAACTGCCAAAATCCACTGataatcaaaatgatattgaaaagACTGACTCGAATTCTCAGGACACTTCCGAGCTGATTCACTGCCCTAACAAATGCGGAAGTATGTTTGAGCATAGTTTCAATATTAGTCGTCATTTGCGTCAATCCTGTTCTAAAGTTCGTCGTTTCAAGTGTCCGCATTCAAAATGTTCTTACCGTTCACAGCAGTTCAATTTGGTTGGAAAGCACATAAAGAGGAGTCATCGACTGAGCAAGATTTACGCTTATGATGTTTTTACCAAGCAGTTTGTCTATTCAGAACCTAAACGTCGCCCACGGTCTTTGCCGGTACCCAAAAAAGCTATACAGGAACCTGCTGTCTCATCAGAGCCAGAAGTTGAACAGAAATTGGATTCAGTAGTTCCTAAAACATctactaaaaaaactaaaatgcaaAACCGCTATCCCTGTCCTAACAATTgcggaaaatctttcaaattagaaCGCGCCGTAGACACTCACTTGAGACTGATTTGTGGCCGTAGTCCTCGATACAAGTGTCCGTATTGCAGCCAAGTATGCAGACATCAAGGGAATATGACTATCCATATAAAACATCGACATCCTGGGCGAAGAAATTATTCGATCGACATATTGAAGAAGAAAACACCTAAGGAAGCAGGTAAGAAGGCAAGGAAAGAGAAAAAGACTGAAGAAATTCAGGAAGAAGCGGAAAAGGAACAACTTCAGATTGCAACTGGATCAGATGACATGGATGATCAAAACATCCTTAATACAGAAACCTCTGAGGCTGTCTTCCAGCCTCATTTTATGGATATACCTGCTAGACAAAAAGCCAAGAAGGTTAAGATGGCCAAGTTGGCCAAAAAGTCCTTGCCTATAATGAAACAAAGATTGGATTGTCCTAACAAATGCGGTCGCAGTTTTCTATCAGCTCAAAGATTAAAGGTACACGTAAAATCAAACTGTAAAAACGCTCCCACTTTTAAGTGTCCACACTGTGAGACTATTTGTGCACATTCGTGGAATATCTCTATGCACATTAAACACCGTCATCCTGAATTTTATAGTGCTAATAAGCAGCAAGATATCGGGACTGAAGAGAATCAGATAAATAATGAGGATTTGAGAAAACAAAACGGAACGGGCGAACAATTGATgaatgaaaatgaagaaattgcAGGTGGATCACAGGAAGTAGATCATTTAGAACAAAGCAGCATTATTGCCGTTGCTAACGATCTTGACGTTGCTAACGATATTGAAGAGGAGGATGTGGAGATGGAAGAAAATGTAACCGAAGATGTGGAGATGGAAGAAAATGTAACCGAGGATGTGCCATTTAATACAGCTTTATCGTGTTACTGGTTACTTGTTTTCGCGTGCTGTTTCAGCTCTAACTTCCTAACCTCGTTCTTAGCAACGTTCGAGGAGAATTCCTTAGATTCTTTGTTGATAAAACAGAAATATACTTTATCAACTTTGAATTaTATCACTGCACATGCGTCTGGGGTTCCTCGATCAGTGCCATTGATACACACGTGTTCTACTTGTAAGAGCACTTTCCAAAGGAAGAGTAGTCTCGTAAGGCATATGCGCTACACTTGTGGCAGCGAACAACGCTTTAAGTGTCCATATTGTTACAATTTCTTAGAAAACGACTCAACGTATTCACCAGTCGATTATGAGGCTTCGCGAAAACATTCTCAAGGGATTGTGTTTGCCTGTCCAACTCACAATTGTTCAAAAACGTTCACCTGGAAGGGAAATCTTAGCAGACATTTGCGATACGAGTGCAACGTGCAACCTCGATTTCAATGTCCGCATTGTCAATATAGATGTAAAGTAAAAAGCGATGTGGGGAAACACATAGTGAGACGACACAAGGGGATGATTCGACTATGGGGTCATCAAATTGCTTCAGAAGATTCTTTTGACCCACAaagaaaaacacaaaatttcaatacaacgcaaactaaagaaaaaagaaatagacGATTTGTTTGTCCAAATGTGGGGTGCAACAGCATGTATAACAGGAAGAATAATTTAACTTATCACATGAGAAATACGTGTGGATTGAGACGTCGATTCAAGTGCGGATTTTGCAATTATATGTGTAAAGTAAAATCTGACATTCGTAGACACTCTTTAAAAAAACATGTAGACTTGCACTCTCATCTCATCTTCACTGGAAGGGAAGActacattagaaaaaattttgaaaaaatgcaccAGAGTTCACAAGAAGACGTTTTAGCGGAATTTGATATATCTCCAAGGAGAATGTTTCCCTGTCCAAAATGTCCAAGCACTTTTCGCCAAAAACCGAGTCTTACAAGACACATCAAATACGAATGTTCTCAGCCACCGAGATTTTCCTGTCCCTATTGTCAGCACCGAAGCAAAAAAACTTCAGATATTTATGTCCATGTCCGTAGAAGACATATCGATTGCCAAGTTTTTGCGATCGACATTCACGGCAATCCCAGCGATGGTAGCTTACATAGAGTGCCATAA
- Protein Sequence
- MTSLACSRITCPVDQYGEYMFVGEGDQAEVVWECINISDENVESIANRTDEILREGKLAKRNKKRSHPVSEPQVKYLTRSRLRLPEESTKNKKVLECPNKCGSSFFYQHTLDKHVRHICDQPMRYKCPYCSLVSRNRNNLNVHIKFRHPGYKNYVIDTYIGKNEPLFEDEYDTSYEQHIDHSWNEEHEIKILSVSSLAKSEDIKHEFEDFKDESIISKRFSCPNNCGSSYKHEYTLKAHVEFACHQNQALNNLHLEEEESEPGMNDTTMMEVTKFETPEELLNPMALAESSEFKNEDGKWVCPKSCGSTFSTRGNLNYHLRTLCGVEPRLECPYCSHRMKQPSNGFTHVKTHHPDAQLCLVDTVTGEIVRRKKDLANADMTNSENSTPKVSESRKISPTKLARTCQSCGKVFKLHHTLSRHLAEGCGQPPRFKCPWCDYQVRRLSYAFFHVTKNHPGLKVYMVDLLTGESITDSTQIKKEAVEDVKEEKPLTPNPVHSLRPKRAQTSVPAGLQKKKLMCPRGCGQYFFFKPSLQKHIKYKCRKTTKPFQSTECARFKCSYCVNSFVHRTSALRHLRTHHRGKTKIVIDTHAEEIVSETSAAKVLENNQERKTQARILKTPKEKTDKLPKSTDNQNDIEKTDSNSQDTSELIHCPNKCGSMFEHSFNISRHLRQSCSKVRRFKCPHSKCSYRSQQFNLVGKHIKRSHRLSKIYAYDVFTKQFVYSEPKRRPRSLPVPKKAIQEPAVSSEPEVEQKLDSVVPKTSTKKTKMQNRYPCPNNCGKSFKLERAVDTHLRLICGRSPRYKCPYCSQVCRHQGNMTIHIKHRHPGRRNYSIDILKKKTPKEAGKKARKEKKTEEIQEEAEKEQLQIATGSDDMDDQNILNTETSEAVFQPHFMDIPARQKAKKVKMAKLAKKSLPIMKQRLDCPNKCGRSFLSAQRLKVHVKSNCKNAPTFKCPHCETICAHSWNISMHIKHRHPEFYSANKQQDIGTEENQINNEDLRKQNGTGEQLMNENEEIAGGSQEVDHLEQSSIIAVANDLDVANDIEEEDVEMEENVTEDVEMEENVTEDVPFNTALSCYWLLVFACCFSSNFLTSFLATFEENSLDSLLIKQKYTLSTLNYITAHASGVPRSVPLIHTCSTCKSTFQRKSSLVRHMRYTCGSEQRFKCPYCYNFLENDSTYSPVDYEASRKHSQGIVFACPTHNCSKTFTWKGNLSRHLRYECNVQPRFQCPHCQYRCKVKSDVGKHIVRRHKGMIRLWGHQIASEDSFDPQRKTQNFNTTQTKEKRNRRFVCPNVGCNSMYNRKNNLTYHMRNTCGLRRRFKCGFCNYMCKVKSDIRRHSLKKHVDLHSHLIFTGREDYIRKNFEKMHQSSQEDVLAEFDISPRRMFPCPKCPSTFRQKPSLTRHIKYECSQPPRFSCPYCQHRSKKTSDIYVHVRRRHIDCQVFAIDIHGNPSDGSLHRVP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -