Aque017215.1
Basic Information
- Insect
- Andricus quercuspetiolicola
- Gene Symbol
- -
- Assembly
- GCA_035222095.1
- Location
- JAWWEA010000101.1:29322781-29346136[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.00019 0.06 16.0 0.3 2 23 469 492 468 492 0.95 2 10 0.0042 1.3 11.8 0.8 1 23 498 522 498 522 0.98 3 10 0.00034 0.1 15.3 0.3 1 23 528 552 528 552 0.97 4 10 0.012 3.8 10.3 0.2 5 23 564 582 559 582 0.89 5 10 0.049 15 8.5 3.4 1 21 589 611 589 613 0.95 6 10 0.00052 0.16 14.7 0.4 3 23 622 644 620 644 0.92 7 10 6.4e-05 0.019 17.5 0.8 1 23 650 674 650 674 0.94 8 10 2e-05 0.006 19.1 0.7 1 23 680 704 680 704 0.97 9 10 0.00017 0.052 16.2 3.3 1 23 710 732 710 732 0.99 10 10 0.00021 0.063 15.9 1.1 1 23 802 827 802 827 0.95
Sequence Information
- Coding Sequence
- ATGTCTCGTAGAGGAATGGTGTCgatcaaaacaaaacaaattccCCGAATATTTCAACGTCAAAAAACAAGCAAGCCTCTCACGTTAACCTCGTTTAATAGTCCCGAGGATGGATTTTCTACCCGAGAACAGACAGAAAATTCCCCTAGCGATTTATTTCCTGATTCATTTCATGATTATCAACATGACGAAgaggaaaaagttaaaaaagggaaaaaatatgCACCTTCCAAATCAACAACAAAGGAATTTCCGGAGAAAACGTGGAATGCGAGCTGTCAGATGAACGACGACAGTACTGATACACAAAGTAcacattcaacccaaaaaaccGCAGATGCAGAAACAGTGGCCAGCATTGATAAATGGCTCAAAGTTCGCACAGATTCTGTCTCAAGCATGGACCTCGAGTCTATGAAACCCGAAGGCAGTGTTCCTAGTTATTTGGCCAACGAACTCCAGcatacttttttggtaaaagattctgATCTTGCCATGGATATCGATTTATCTGACAAGAAACTGAATCTCGCTTATGATCCGATCCTTCATGAactccaaaatgaaaaattgctcgaCACCTGCACCAGTGATGAATTCAGAATACCAGGATTGCACTATGATCCTCTAGATCCACTTGAACTCGCCCCAGACATGATGGTCGCAGGTGAAATTCTTCCTTCTACAAGCGCTCTCTCAGTTTCGTCACTAAATGTTGTTAATGATCCGAATGAATGCGTTCGATTGCAACAGGTATCTTCTCTCAACTTAGAAACTGATATCGATCTTTGCGATAAGTCTACTCAAGTCTACGTTCGcgattttgatagaaatttatcaataaattctCAAATGATAGGCGAAGTTCACGGTGAAGATTCAAGACAGAATGTTGAGAGTTACATCATAGATGAAAATTATCTCGGAGGACTAACAACCGTAGAATTCATTAACGATCTTTCAGAAGCAGGTATCAGAATTCTGGATGAtcgaaaacctttaaaaatgaaaaccaaagAGTCTGGCATAGCCAAAAAGCGAAAAAGACTCTCGGAAAGGAAACTTGTTAATGGAAGCTTTGAGAAGGAAGGTGATCCCATTGATGATGCTGATGGAATTATGGCTCTTGTTGCTATATCGACTGACAAGGTCTCGAATATGACTCAGATAGTGATTAACAATGGGAAAGAAGAGCAAATTTATCAGGGGAAAACGTCAGAGTTGATTCAAGCAACTGGTCATTTTCCGAGGATCGATGCAACCATGTGGAATGGAAGTGTTGATTCTGGTAAAGATAATTCAGCGAACAGTCATGATTTGATTATATCCAGTGCTCTCGAAGATTTGGGTATTACTGATGAGGTTTTGCAACCGGTGTCGAATGCTGATCAGGGAAAAACGTGGGTTTGTCCCAAGGATGGTTGCGGTCGACATTTCAATCGACTTTATGCTCTTAAAGGTCATCTGTTGACTCATTATGGAGTTAGACCCTTCAAGTGCGACTTTGAAGGATGTGCCTGGGCCTTCTATTCCGAATTCAAATTGAAACGCCATAGAGAAACACACTTGAAGAAAAAGAATTACGTCTGCGAAGTGGCGGGTTGTCAACGGAGGTTCACGACAATCTACAATCTCTGGAGTCACAAGAAGTTGCATCAGCGTCCGAATCGAATAGTCTGTCAAGTGCCAGCCTGCGAGCAAAAATTCCAAACTAAAAGAGCTCTCGAGATTCATATGAAGTCTCATGATCAGAGCCACGCACCTTATGTCTGCAAGCATGAAGGTTGTGAAAAACGTTACTACAGTAGTAATGCCCTAATATCACATCAACGTTGTCACAGCTACAAAGATACAGACATCATTTGCTCCTGGCCAGGATGTGGAAAAGTTTTTGATAAACCTTGTCGTCTCAAGGCTCACACTCGATCTCACACTGGATGCAAACCCTATCCGTGTATGTTCCAAGGCTGCCAGTGGGCTTTTGCTTCTTCCAGTAAGTTGAGGCGTCATCAGAAGAAACACACCAATGATCGCAAATTTGTTTGTGAAGTTGCCACTTGTGGTAAAGCATTCATGAGGTCTGAACATCTGAAGGAGCACAGACTGACTCATTCAGAAGGAAGATACTTCCAATGCCACATGTGTGATTCACGTTTTTCTGCGAAGAGTAGTCTTTACGTTCACATAAAGAAACACCAGTCAAAAACTGATTCTCCTAAAAAAGATGCagcagataaaaataaaaatccacccAAGGAGTGTCTTCCCTCCTCAAAAGAGAAGAAATTGGATTCTTGTGATGATCTCACCCGCGAAACCGAGcttcaaactaaaataataagtcGAGAGACTCTTTCCCGAACGGATCAAATCAAGGATCCAACAAAAGAACCAAAAACTCTCCATCAGTGTCCAGTTGAGATTTGCAAAAGATCTTACACCTCGAAAGCTACGCTTCGATCGCACTTGGTAAAAATGCATGGTACCGTGGAAAAAGAAACTGCACCGATTTCACCTGCAAAGACTCCTTCCACTGACTCAGTTCCAAACACTGATGATAATGCAGATTACATCGTCTACACGCCCTATCCCATTTCTCAGAACGATCAGATGATTATGGTTTCACCCTATGATTCTGTAATTTTCAGTTCCTCTCCTGAAGCTAACGTTCTTCTTGAACCGGAATCTCCTAGACTAACTTCCGTTTTAAAACGGAAGCAGCCCAACCAAGGGGAAAAACATCGTCGAAGAGACCAAGGATCAGCGAGGACTGGATTAACATACGCTGATTATTTTAAAGTAAAGGCTCATAATAGAAATTCCCAAACGGCTGTTGGTGCAACTGACGTCATTTTAGGCTCAGCTGATCTCGGAGAAGGTCTTCTCTTGACTGAAGATCTTCCTTCTTCGTTGTACTTTCAGGATGACCTTGAAGGGACTGAATGCCAGGTTCTTTTACTTGATTCAGGAGTTGTATGTGATTTCGTTTGA
- Protein Sequence
- MSRRGMVSIKTKQIPRIFQRQKTSKPLTLTSFNSPEDGFSTREQTENSPSDLFPDSFHDYQHDEEEKVKKGKKYAPSKSTTKEFPEKTWNASCQMNDDSTDTQSTHSTQKTADAETVASIDKWLKVRTDSVSSMDLESMKPEGSVPSYLANELQHTFLVKDSDLAMDIDLSDKKLNLAYDPILHELQNEKLLDTCTSDEFRIPGLHYDPLDPLELAPDMMVAGEILPSTSALSVSSLNVVNDPNECVRLQQVSSLNLETDIDLCDKSTQVYVRDFDRNLSINSQMIGEVHGEDSRQNVESYIIDENYLGGLTTVEFINDLSEAGIRILDDRKPLKMKTKESGIAKKRKRLSERKLVNGSFEKEGDPIDDADGIMALVAISTDKVSNMTQIVINNGKEEQIYQGKTSELIQATGHFPRIDATMWNGSVDSGKDNSANSHDLIISSALEDLGITDEVLQPVSNADQGKTWVCPKDGCGRHFNRLYALKGHLLTHYGVRPFKCDFEGCAWAFYSEFKLKRHRETHLKKKNYVCEVAGCQRRFTTIYNLWSHKKLHQRPNRIVCQVPACEQKFQTKRALEIHMKSHDQSHAPYVCKHEGCEKRYYSSNALISHQRCHSYKDTDIICSWPGCGKVFDKPCRLKAHTRSHTGCKPYPCMFQGCQWAFASSSKLRRHQKKHTNDRKFVCEVATCGKAFMRSEHLKEHRLTHSEGRYFQCHMCDSRFSAKSSLYVHIKKHQSKTDSPKKDAADKNKNPPKECLPSSKEKKLDSCDDLTRETELQTKIISRETLSRTDQIKDPTKEPKTLHQCPVEICKRSYTSKATLRSHLVKMHGTVEKETAPISPAKTPSTDSVPNTDDNADYIVYTPYPISQNDQMIMVSPYDSVIFSSSPEANVLLEPESPRLTSVLKRKQPNQGEKHRRRDQGSARTGLTYADYFKVKAHNRNSQTAVGATDVILGSADLGEGLLLTEDLPSSLYFQDDLEGTECQVLLLDSGVVCDFV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00201018;
- 90% Identity
- iTF_00064725;
- 80% Identity
- -