Aque007646.1
Basic Information
- Insect
- Andricus quercuspetiolicola
- Gene Symbol
- -
- Assembly
- GCA_035222095.1
- Location
- JAWWEA010000021.1:42044049-42188852[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.0012 0.37 13.5 0.5 1 21 3 23 3 24 0.96 2 23 0.032 9.7 9.1 1.5 1 23 32 55 32 56 0.95 3 23 0.001 0.32 13.7 4.3 1 23 67 90 67 90 0.96 4 23 0.048 15 8.5 2.2 1 23 183 206 183 206 0.95 5 23 0.036 11 8.9 0.3 1 20 213 232 213 236 0.95 6 23 0.00035 0.11 15.2 0.4 1 21 308 328 308 329 0.95 7 23 0.035 11 8.9 5.4 1 23 337 360 337 361 0.94 8 23 0.022 6.7 9.6 3.0 1 23 372 395 372 395 0.96 9 23 0.0059 1.8 11.3 3.6 1 23 402 425 402 425 0.96 10 23 3.2 9.8e+02 2.7 0.1 1 14 433 446 433 449 0.87 11 23 0.0007 0.21 14.3 4.5 1 21 621 641 621 642 0.96 12 23 0.047 14 8.5 7.6 1 21 744 764 744 765 0.95 13 23 0.025 7.6 9.4 3.2 1 23 773 796 773 796 0.96 14 23 0.16 49 6.8 1.8 1 23 809 832 809 832 0.93 15 23 0.00075 0.23 14.2 2.1 1 23 839 862 839 862 0.96 16 23 0.00021 0.063 15.9 1.6 1 21 1228 1248 1228 1249 0.95 17 23 3.3e-06 0.001 21.6 4.1 1 23 1257 1280 1257 1280 0.96 18 23 0.1 32 7.4 3.2 1 23 1292 1315 1292 1315 0.95 19 23 0.21 65 6.4 0.6 1 21 1628 1648 1628 1649 0.94 20 23 0.052 16 8.4 1.3 1 21 1744 1764 1744 1765 0.96 21 23 1.8e-08 5.6e-06 28.7 0.6 1 23 1773 1796 1773 1796 0.97 22 23 0.017 5.2 9.9 3.3 1 23 1808 1831 1808 1831 0.96 23 23 0.00075 0.23 14.2 3.3 1 23 1838 1860 1838 1861 0.95
Sequence Information
- Coding Sequence
- atgaaatacaCATGCAACAGGTGTGCGCGAAGCTATGCCCGGAAAGGAACTTTGACTGCTCATCAAAAATTCGAATGCGGCGTCAGTCCTCAGTTCAGATGTGAATTCTGCGGCAAACTATTTAAATGGAAAAGTGACATGAATGTACATGTAGATCGTGTGCATCACAAGAAAAGCGAAAAGTTTTCGGTATTAATGCATAAATGCGAAAAATGTTCTCAAAGTTACAGATTCTCAGATTCGTTAAATCGACATAAACGTTTAGAACACGCAGCAGTCAAACCACAATTTACCTGCGATATTTGCGATTACAAAAatccagAGACAATCACGGTCCAGAAACGGAATGAAACGTATAAGACAAAATTTTATACCGTAGATATAAAAGAAGCTGGGGTTTTCGATGTTAAGCACAAACTGCGAACCCTAAAGAAGCAGGAAGTTCGGGAATCAAAACAGGAAATAAAGCACACATGCGAAAAagaCGTGAATATCCATGCAGATCGTGTGCATCATAAGGAAAGCTCAAAGAAATCGGCATTGAGGCACAATTGCGACAAATGTTCACGAAGTTACAATTGGCCAAGAGATTTAACTCGACACAAACGCTTAGTACATACTACAGTCAAACCAGAATTTACGTGCGATTATTGCGGATTTCAAACTAATGTGAAAAGTACCTTGGCAGAACACATTCCTTTACGCCACTTGCAGGCATCGAAAGATAGGCGAAATTGCGATAAGTGTTCGCGAAGTTACACGTGGTTAAacccaGAGACAACCATAGTCCAGAAACGGAATAAAAGATATGAGTCAATATTTTATACCGTAAACATAAAAGAAGATGGCATTTTTGATTATAAGCCCAAACTGCAGACCCCAAAGAAACATGAAATTCAGAAATCAAAACGGGAAACTAAATATACATGCAACATATGTGCGCGAAGCTATACCCGCAATGCATCTTTAACTgctcataaaaaatttgaatgtggTGTCATGCCACAGTTCAGTTGTAAATTTTGCAGCCAACTATTTAAACGGAAAAGTCACATGAATGAACATATAGATCAGGTGCATCACAAGGCAAGCTCAACGAAGTCGGTATTAATGCATAAATGTGACAAATGTCCTCGAAGTTACATTTGGCCAACTCATTTATCTCGACACAAACGTTTAGTACATGCAGCAGTCAAACCACAATTTATTTGCGATTTTTGCGGATATAAAACGAATACGAAATGTAACTTGGTGACACACATGACCTCACGTCACTGTCAAACATCCGAATCCAGGCATATATGTGACATATGCTCTCGACATTATCGTTCGCCAAATAGTCAGATCCAAAGTGAGTCAAAGAAATCAACTAGAAGAGAGGATGGTGGGCCATATTCTTGTAAAATTACTCACATTTCTTTCGATAATAAATCTGGAGCCAAGACGCCGATTATATATGAAATTGATGATACTTTGGACATCAAGGACGAACCCACTCAAAatccagAGACACTTACAGTCCAGAAACGGAATAAAGCAAATGAGTCAACATTTTGTACCGTATATATAAAAGGAGATAATATTCTGGAGGTTCAGCCCAATTCACAGACCCTAAAGAAGCAGGAAATTTCGGAATCGAAACAGGAAATAAAGTACACTTGCAAAAAGTGTCAAGAGACAATTACAGTCCAGAGACGAAATAAAACAAatcaCGAAACAATTACTGTCCAGAAACTAAATAAAACAAATGATTCAAAACTGTGTACCGTAAATATAAGGGAAGATGATATTTTTGCTGCGAAGTGCAAACTGCTGTCCCTAGAAGAGCTGGAAATTCCGAAATCAAAACAGGAAGTAAAGTACACATGCAAAAAGTGTGGTAGAACCTATAAAAAGAAATCTCAAATTAATCATCATCAAAAATTTGATTGCGGTGTTATGCCACAGTTCAGTTattcatCAAATTTCTGTACCGTATATGTAAAAGAAAATGATACTTCGGAGTTTAAGCCCGAGCTGCAGACTATAAAGAAGCAGAAAATTCAGGAATCAGAACAGGAAAAGAAGCACACATGCGAAAAGTataaagagACAATTACAGTCCAGAAACGGAATAAAACAAGCGAGTCCAAATTTTGCACCGTATATATAAGAGAAGATGATATTTTGGATGTTAAGCCGAAACCGCAGACCCTAAAGAAGCAGAAAATCCAGGAGTCAGAACAGAAGCACACATGCGAAAAGTGTGGTCGAACCTATAAAAATAAATGTCAtatgaattatcatcaaaaatttgaatgcgGCGTTATGCCACAGTTCAGTTGTAAATTCTGCGACAAGCTATTTAAACGAAAATGTGTCATGAATGCCCATATAGATCGCGTGCATCGCGACACAACTAGCTCAAAGACGTTGGTTTTGAAGCACAAATGCGACAAATGTTTTCGAAGTTACAATTGGCTAGGAGATTTAGTTCGACACAAGCGCTTGGTACATGCAGTAGACAAACCACAATTTATTTGCGATTTTTGTGGTTATAAGTTCAATGCAAAATATCATTTGGTAGTACACATGACTTCACGCCACTCACAGACATCGAAATCCAGGCATGAATGTGACAAATGTGCGCGGAGAAAAGGAACACCACTTTGCAAAGATGTACCATTTTTAAAAGTTAGAGATATTGAAAGACTTCAGTCGAAAGAAAAAGAAGATTCAGGAACTAATGCAGAGCATTACATAATCTTGATGAATGGGGCAAAAATACCTTTAGTTACTGCTGATGATTCCACAGCATCTGATACTGCTTCACCATCAACACCATCAGTATCCACACAATTTTCTGCACAATTATCTGCCCATTTGCCATTATTTGTTGCTGCTGGTTCTTCATCTTTGAGCTCCATTCCTACACGTGCAGATGAACCATTATTCGACAGGgaaaaGGCTATTGAGGGCTTGTTTCCTCCTTCGTGGGTACATGACATACATGCTCTATTGAGTACAGTTGAAAAACCTGAAGACACTATAAGAAATGACATCATAAGAAAAATCGTAAGGCGAATGGAAGATGCAGCTTTATCACATGATGATCTTCCGGATATAGCAGATCAAACTCTCCGCAGATTACCTCTTCTTAAACTAAAAAGCGTTAATGGAACTGAGGCGTTAATCAGTCAGATGAAgaagtgtttaaaaaatcatgaacagTACGTTAATCGGCAGAGGAGGAAAACCAACAGAGCGAATATGAAAATATCTCACAAAGCGTTGATGGCAGCCATGAATcaagaaatggaaaaattgacACCGTCAGTCAACGTACTTAACACCCTTCTCGTCAATTGTCGAAGAAAAAGACAAGAAGATGCTAGAAGATACCTGAAGATCAAGAGTGAGTCGAAGAAATCAACAGGAAGACCAGATGGTGGTCCATGTTCTTCTACAACTCctgatattttttttgtcgatacCAATACTTTAATCAAATACGAAATCGacgaaactttggaaatcaaggaagaGATCATTCAAGATCCAGAGACTAGGGGACAGAAACGGGATGAAAGATACGATTCAAAGGTATGCACCGTAGATGTAAGAGAAGCTGCTGTTTTGGATGTGAACGAACTGCGGACCAACTTAAAGCAGAAAATTGTGGAATCAAAACATGAAAAGAAGTACAGATGCGAAAAGTGTGGTCGAACCTATAAGcagaacaaatatttgattgttcataaaaaattcgactgCGGAGTCACGCCACAATTCGCATGTAAATTATGCGGCAAACGGTTTACACGGAAATGTAATTTTATTCGGCATATGAATTCTGTACATATGCGTTTAGAACAAGCAGTAGTCAAACCAGAATTTATTTGTGATTTTTGTGGACATAAAGCGAATAGGAAATGTAACTTGGCAGACCACATTACTTCTCGTCACTTGCAGACGTCGACACAAAGGTATAATTATCAAAAGTTTCCGACGAGTGAGTCGAAGAAATCAGCAGGAAGACAGGATGGTGGGCCATATTCTTCTGCAACTACCTGCATTTCTTCTAGCAGTAATTCTAGTGCCAGGACTTTAATTAAATACGAGATTGACGAGACCTTGGTAATCAAGGATGAAATCATTCAAGGTCAACCCTATTCGAGGAGTGAGTTGAAGAAATCATCCTCTGCAACTAGTAGCATTTCTTCCATCAATAATTCCGGTGCCAGAACTTTAACTGGATACGAGATTGACAAAACCTTGGAAATTAAGGATGAAGTCATCCAAGATCAACAGAATTCCAAGATTGAGTCGAAGAAATCAACAGAAAGACAGTATGGTGAACCATATTCCTGTAAAACTACTCTAATTTCTTCTTGCAATAATTCTGGTGCCAAAACTCCACTTGCGTACGAAAGTGCATCCTTGAAAACCGAGGATGAAATTGACCAAGATCAGCATAGCGCTTCGCGTAACATCAAGAGTTGCAAGAGTTTTTCGAGGAAATCAACAGAAAGACCAGATGGTGGACAATATTCTGGTCTTCACAGTGgtgactttttgaaaattaaaactctttttgTGAAACACGAGAGGGAAGAGCACAATCTTTTCTCCGACGGAAATCGGTTAGACGCAAAATATATGACTACTTCTGATGCCAAGAATTCAACTTGCATGGCTGCATACGACATTCATGGAActttagaaataaagaaagaaataattcaaGaaaaagagacAGTTACCATGCGGAGATGTGATAAAAGGTATGAGTCAAAATTGTGTACCACAGAGAAAAGAGGAGATGACATTTCAATGGTTAAGGAACTGACAAATCGAAACAGGCGGAAAATTCAGGAAGCAAAACAGAATCCGGAAAAGAATTACATATGCGAAAAGTGTGCGAGAAGCTATAAATGGAAAGAAAGTTTGATTCGCcataaaaaattcgaatgcgATTTAGACGAAACATCTATCACTACTGCTTCTGCCAATAAAGCCGATGAAAAGTCTCTGACTTGCATAATTGAATATGACAATGACAAAACTTTGGAAATAAAGGAAGAAATCATCCATGatcaacaGTCAGTTATAGGCCAGCAACGTGATAAAAAAGATAAGTCAAAACTGTGTATCACAGATAAGATAAATGCTGAGATTTTGACGGTTGAAAAGCTGCGGAACCAAAAGAAGCACATAATTCAGGGATTAGCAAATGAACCGGAACAGGAATACAAATGCAAAAAGTGTGCCCGCAGCTACAAATGGAGAGAAAGTTATATTCGTCATATAAGATACAAATGCAACGTCATGCCACAGTTCAAATGTGAAATTTGCGGCAAACGATTTGAACAGAAATCAAACCTTTGGCGACATATGGAAAGCGTGCATCAGAAATTAGACTTGCAGATATCGCAAACGAGGCATAAATGCGACCAATGTTCTCGAAGTTACAGTTACATGCGTGGCTTAAATCAACATAAACGTTTAGAACACGCAGAAGTTAAACCACAATTTAATTGCAATATTTGCGATTACAAAACTAAACGCAAAGATTACTTGTCAAATCATATCTCTTTACACCATATCCATAAGTAA
- Protein Sequence
- MKYTCNRCARSYARKGTLTAHQKFECGVSPQFRCEFCGKLFKWKSDMNVHVDRVHHKKSEKFSVLMHKCEKCSQSYRFSDSLNRHKRLEHAAVKPQFTCDICDYKNPETITVQKRNETYKTKFYTVDIKEAGVFDVKHKLRTLKKQEVRESKQEIKHTCEKDVNIHADRVHHKESSKKSALRHNCDKCSRSYNWPRDLTRHKRLVHTTVKPEFTCDYCGFQTNVKSTLAEHIPLRHLQASKDRRNCDKCSRSYTWLNPETTIVQKRNKRYESIFYTVNIKEDGIFDYKPKLQTPKKHEIQKSKRETKYTCNICARSYTRNASLTAHKKFECGVMPQFSCKFCSQLFKRKSHMNEHIDQVHHKASSTKSVLMHKCDKCPRSYIWPTHLSRHKRLVHAAVKPQFICDFCGYKTNTKCNLVTHMTSRHCQTSESRHICDICSRHYRSPNSQIQSESKKSTRREDGGPYSCKITHISFDNKSGAKTPIIYEIDDTLDIKDEPTQNPETLTVQKRNKANESTFCTVYIKGDNILEVQPNSQTLKKQEISESKQEIKYTCKKCQETITVQRRNKTNHETITVQKLNKTNDSKLCTVNIREDDIFAAKCKLLSLEELEIPKSKQEVKYTCKKCGRTYKKKSQINHHQKFDCGVMPQFSYSSNFCTVYVKENDTSEFKPELQTIKKQKIQESEQEKKHTCEKYKETITVQKRNKTSESKFCTVYIREDDILDVKPKPQTLKKQKIQESEQKHTCEKCGRTYKNKCHMNYHQKFECGVMPQFSCKFCDKLFKRKCVMNAHIDRVHRDTTSSKTLVLKHKCDKCFRSYNWLGDLVRHKRLVHAVDKPQFICDFCGYKFNAKYHLVVHMTSRHSQTSKSRHECDKCARRKGTPLCKDVPFLKVRDIERLQSKEKEDSGTNAEHYIILMNGAKIPLVTADDSTASDTASPSTPSVSTQFSAQLSAHLPLFVAAGSSSLSSIPTRADEPLFDREKAIEGLFPPSWVHDIHALLSTVEKPEDTIRNDIIRKIVRRMEDAALSHDDLPDIADQTLRRLPLLKLKSVNGTEALISQMKKCLKNHEQYVNRQRRKTNRANMKISHKALMAAMNQEMEKLTPSVNVLNTLLVNCRRKRQEDARRYLKIKSESKKSTGRPDGGPCSSTTPDIFFVDTNTLIKYEIDETLEIKEEIIQDPETRGQKRDERYDSKVCTVDVREAAVLDVNELRTNLKQKIVESKHEKKYRCEKCGRTYKQNKYLIVHKKFDCGVTPQFACKLCGKRFTRKCNFIRHMNSVHMRLEQAVVKPEFICDFCGHKANRKCNLADHITSRHLQTSTQRYNYQKFPTSESKKSAGRQDGGPYSSATTCISSSSNSSARTLIKYEIDETLVIKDEIIQGQPYSRSELKKSSSATSSISSINNSGARTLTGYEIDKTLEIKDEVIQDQQNSKIESKKSTERQYGEPYSCKTTLISSCNNSGAKTPLAYESASLKTEDEIDQDQHSASRNIKSCKSFSRKSTERPDGGQYSGLHSGDFLKIKTLFVKHEREEHNLFSDGNRLDAKYMTTSDAKNSTCMAAYDIHGTLEIKKEIIQEKETVTMRRCDKRYESKLCTTEKRGDDISMVKELTNRNRRKIQEAKQNPEKNYICEKCARSYKWKESLIRHKKFECDLDETSITTASANKADEKSLTCIIEYDNDKTLEIKEEIIHDQQSVIGQQRDKKDKSKLCITDKINAEILTVEKLRNQKKHIIQGLANEPEQEYKCKKCARSYKWRESYIRHIRYKCNVMPQFKCEICGKRFEQKSNLWRHMESVHQKLDLQISQTRHKCDQCSRSYSYMRGLNQHKRLEHAEVKPQFNCNICDYKTKRKDYLSNHISLHHIHK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -