Basic Information

Insect: Andricus quercuspetiolicola
Gene Symbol: ZEB2_1
Assembly: GCA_035222095.1
Location: JAWWEA010000101.1:44140144-44153520[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.013 3.9 10.3 1.2 1 20 95 114 95 116 0.92

2 14 0.011 3.5 10.4 0.4 2 23 153 175 153 175 0.91

3 14 6e-05 0.018 17.6 0.1 1 23 181 203 181 203 0.98

4 14 4.1e-06 0.0013 21.3 2.6 1 23 209 231 209 231 0.96

5 14 0.0017 0.51 13.1 3.7 1 23 240 262 240 262 0.96

6 14 7.1e-05 0.022 17.4 1.0 1 23 268 290 268 290 0.97

7 14 2e-06 0.0006 22.3 0.4 1 23 295 317 295 317 0.98

8 14 0.0023 0.71 12.6 3.9 1 23 324 346 324 346 0.98

9 14 2.4e-05 0.0074 18.9 0.9 2 23 366 387 365 387 0.97

10 14 1.1e-05 0.0033 20.0 1.0 1 23 394 417 394 417 0.97

11 14 0.0017 0.51 13.1 0.4 1 23 423 445 423 445 0.97

12 14 0.0019 0.59 12.9 4.6 1 23 451 473 451 473 0.99

13 14 7.7e-05 0.024 17.3 1.5 1 23 479 501 479 501 0.96

14 14 2.7e-07 8.3e-05 25.0 1.3 1 23 507 529 507 529 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.013	3.9	10.3	1.2	1	20	95	114	95	116	0.92
2	14	0.011	3.5	10.4	0.4	2	23	153	175	153	175	0.91
3	14	6e-05	0.018	17.6	0.1	1	23	181	203	181	203	0.98
4	14	4.1e-06	0.0013	21.3	2.6	1	23	209	231	209	231	0.96
5	14	0.0017	0.51	13.1	3.7	1	23	240	262	240	262	0.96
6	14	7.1e-05	0.022	17.4	1.0	1	23	268	290	268	290	0.97
7	14	2e-06	0.0006	22.3	0.4	1	23	295	317	295	317	0.98
8	14	0.0023	0.71	12.6	3.9	1	23	324	346	324	346	0.98
9	14	2.4e-05	0.0074	18.9	0.9	2	23	366	387	365	387	0.97
10	14	1.1e-05	0.0033	20.0	1.0	1	23	394	417	394	417	0.97
11	14	0.0017	0.51	13.1	0.4	1	23	423	445	423	445	0.97
12	14	0.0019	0.59	12.9	4.6	1	23	451	473	451	473	0.99
13	14	7.7e-05	0.024	17.3	1.5	1	23	479	501	479	501	0.96
14	14	2.7e-07	8.3e-05	25.0	1.3	1	23	507	529	507	529	0.98

Sequence Information

Coding Sequence: ATGCATGATAGAAGATTTACTAAGTTGGGTTGCTCTGTTGGGAATAATATCGAAGAAGACACCGATAAAGACAAAGTTTATCTGGGGTACTTGATTGCTTTAGATCAAAATCAAGTAAATTTGGAAATGGATCAATCAGAAATTATGTCCCACCATTCGGAATTGAGCGACACAGCCTTGCATAATCTCAAGTTCCCAGACAGTTCTGACAATGAGGTTCACCCAGGCTTGACTACTTTTTTCCAAGTCCTACGTGAACCCGAAGCAAGCAACGACAATTGTTTTGAATGTCCTCAATGTGGTGATTGCTTCAAAACACAACAAACTTTTGACAGTCATAAAATAATTTGTGATAAAAGAGACGAACCCTACATTCTAAATGTTGAGGGTTCGGATTGTTTAGATTCATCATTCAATGACGTTGATGTCTTATTCGATCCGTCTGGAATGGAACGAACTTGCGGATACTGTCAGACCATTTTTGATACTCGAAAAGAGATGCAAACTCATGTAGCAGAAACTCATGTGGGtcagaatttgtttaaatgcaATATTTGCGAGAAAGCTTACGAGAAATGGTCGAGTTTGGATATTCATGCGGCTACGCACCGAACGGATAAACCCTACCTTTGTGATCTGTGTGGAAAGagctttaaacattcaaataatttaaggggTCACAAAAGGATTCATCTGGAGGAATCGAAGAAGAAGAGACACGTCTGTGATATTTGCGGAAGCGCCTTTAGATCTAGATTTCACTTGGGCGAACATATGCATCAGCATACTGGCAAAAAACCGTATGCTTGTGATCAATGTGGAAAAGCTTTCTTTAAGAGAATTCAATTAAGGCAACATAAACTTTCTCACGGAGTTAACAAACACGAATGTCCAGTTTGTGGAGTTGCATTTAATAGAAGGGGAAACATGAAAGCGCATCTCAAAAGACATGATAAAGGCGATGGACTCTATACTTGTAGTgTCTGCGAGCGCCAGTGTAAATCGATGAGTGAATTAAAATTACACCGAAAGCAGCATAGTGATTACGACATCATcgaaagtgtaaaaaaaaaatctgctgacAAAACTGTTTGGTCGTGCAAAGTATGTTCGAAGATATTCTCAAAACAAACTTTGCTTCGAAATCACGAGCGTGTTCACGtcggtgaaaaatgtaacttccagTGTGACGAATGTGGTAAGAAATTATCCAGCAAAAGCTCTCTAGCTTATCACAAGAAGTCGATACACTCGAACGAAAGACCTCATGTGTGTCAATTTTGTGGAGAAGCTTTCGTGTCCAAGGATTTGAGGCTTATACACGAAAGAATTCATACCGGAGAACGTCCATATACCTGCAAAATTTGCAACTTGCAGTACAGATGTTCGAGCAACTTAAGTCAACATTTGAAGACGCATTCAGAAACAAAACCCCACATTTGTCGCTTTTGTAGCAAAGGTTTCACCAGAAAAGGTGCATTAACAGTCCATGAAAGGATTCACACAAGTCTAAAGGCGTTCCGCTGCTCAGATTGTGATAGaactttttcacagaaaaaagacATGATAAAGCATATGGAAGTGCACCAAGATAACTCTATGCAGCATAAGAAATGCGATGAAATTTTCACCTGCGTAAAAGACAATCTTGAACTGCTTATCAAACCTTCACAAGTCGAGCCCGACTCGTCCATTATTCACAGCATCGTCATTGTTCCCCAACAGTTAAGTACTTATACCCTCAATATTAGCGAGAAAATCACAGAAATCGATATAGagccaaaaaatttgtaa
Protein Sequence: MHDRRFTKLGCSVGNNIEEDTDKDKVYLGYLIALDQNQVNLEMDQSEIMSHHSELSDTALHNLKFPDSSDNEVHPGLTTFFQVLREPEASNDNCFECPQCGDCFKTQQTFDSHKIICDKRDEPYILNVEGSDCLDSSFNDVDVLFDPSGMERTCGYCQTIFDTRKEMQTHVAETHVGQNLFKCNICEKAYEKWSSLDIHAATHRTDKPYLCDLCGKSFKHSNNLRGHKRIHLEESKKKRHVCDICGSAFRSRFHLGEHMHQHTGKKPYACDQCGKAFFKRIQLRQHKLSHGVNKHECPVCGVAFNRRGNMKAHLKRHDKGDGLYTCSVCERQCKSMSELKLHRKQHSDYDIIESVKKKSADKTVWSCKVCSKIFSKQTLLRNHERVHVGEKCNFQCDECGKKLSSKSSLAYHKKSIHSNERPHVCQFCGEAFVSKDLRLIHERIHTGERPYTCKICNLQYRCSSNLSQHLKTHSETKPHICRFCSKGFTRKGALTVHERIHTSLKAFRCSDCDRTFSQKKDMIKHMEVHQDNSMQHKKCDEIFTCVKDNLELLIKPSQVEPDSSIIHSIVIVPQQLSTYTLNISEKITEIDIEPKNL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00200981;
90% Identity: iTF_00200981;
80% Identity: -