Aque004204.1
Basic Information
- Insect
- Andricus quercuspetiolicola
- Gene Symbol
- -
- Assembly
- GCA_035222095.1
- Location
- JAWWEA010000003.1:33817902-33826876[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 1e-07 3.1e-05 26.3 0.5 1 23 127 149 127 149 0.98 2 21 0.0015 0.47 13.2 5.2 1 23 155 177 155 177 0.98 3 21 0.0042 1.3 11.8 0.6 1 23 183 206 183 206 0.96 4 21 9.5e-05 0.029 17.0 1.2 1 23 213 235 213 235 0.98 5 21 8.7e-06 0.0027 20.3 3.3 1 23 241 263 241 263 0.98 6 21 0.0016 0.49 13.1 2.2 1 21 269 289 269 290 0.95 7 21 0.002 0.6 12.8 0.7 1 21 298 318 298 319 0.95 8 21 0.00022 0.068 15.8 0.2 2 23 328 349 328 349 0.98 9 21 0.025 7.7 9.4 0.1 1 22 378 399 378 399 0.95 10 21 0.0033 1 12.1 4.6 2 23 411 433 410 433 0.95 11 21 0.63 1.9e+02 5.0 0.0 5 23 696 714 695 714 0.93 12 21 1.2e-05 0.0036 19.9 2.8 1 23 730 752 730 752 0.98 13 21 0.00097 0.3 13.8 4.3 1 23 758 780 758 780 0.98 14 21 0.23 71 6.3 1.2 2 23 787 809 787 809 0.96 15 21 0.00018 0.056 16.1 0.5 1 20 815 834 815 836 0.95 16 21 0.0012 0.38 13.5 0.1 1 21 844 864 844 865 0.96 17 21 1.2 3.7e+02 4.1 1.8 1 23 910 932 910 932 0.94 18 21 0.0013 0.41 13.4 0.7 3 21 940 958 939 959 0.93 19 21 0.00016 0.05 16.3 6.4 1 23 967 989 967 989 0.98 20 21 0.0003 0.093 15.4 0.8 1 21 1086 1106 1086 1107 0.95 21 21 0.019 5.9 9.7 5.2 2 22 1116 1136 1115 1136 0.94
Sequence Information
- Coding Sequence
- ATGGCCGTACGAATAGAGGCTGAGCTCTTTGGGATTCAGAAAACGCGTTGGTTCGTTAGCCAACGGGTTGATATATCCAAGAGAAACGGACAGACGTACGGACGTGTTTGTCCCGGGCCATCCACCTCACACCCTCTACTTAACCCCTACCTCTTGTTCATCCTCGAATTCCTGCCCCTTCACCTACCCCTAGGGTCCACGGAACCGAGAGTAAGAGAAAGAGTGAAGCAGATCGAGGAAGAGGATTATGTAGTCGAAATCCAAAAGCGGTTGGTTGATATGAAGTATCCTATAGAAAAAAAAGACGTGATCGCGTCACGTGGAGTGGAAGAGGGTGATATGAGGAAACACGTAATGGTTCATGAAAAGAGAGAATTGTATATCTGTGATATTTGCTCCAAAGGTTTTTCGCGCAAATCTAATCTCATCGTCCATTTAAGAAGACACTATGATATAAGACCTCACAAATGTGACGTCTGTGGCAAAGGCTTTGTTCATGCATCTGTTTGTAAGACGCATATGCGTACTCACACTGGAGAAAGGCCTTTCGAGTGcgatatttgtaaaaaaaaatttggcctTCGTAATACTATGAAATTGCACATTATTATGAGTCATGTAGAATCTAACAGACGTTACAACTGCTTAATTTGCACAAAACGGTTTAAAACTGCGTCTCGTTTAGAAGTTCATAAGCTGACCCACTCCGGAGTTAAACCTTTTAGTTGTAATGTTTGTTCGAAAAGATTCACGCGGAAGAATACTCTGAGAAGACACGAAAATATGCACTTGGATAAAAAGTCGTATAAGTGTAAAACTTGCGGAAAAGGTTTTAATAAATCAGTGCAACTGACTTGCCATATGCAGTTGTGCCTCACTGGAGAAAACCCCTATCAGtgtgatatttgtaaaataagaTTCTCTTACCATTCTAGTATGAAAGGTCACATTTTGAATAATATGAAAGATGGTGGACATCGTAAGTGTCCAGTCTGTCTACAACGATTTTCGACCACTGAAGATTTAATATCCCACATAAAAATCCACTATGCAGATGAAAGATCCGAAAATGAAGTTCCAAGACCGAATCATATAAAATCTTCAGTGTTATCCCAGAAATACAGAAATCGTTTCATTTGTGACATTTGCGCCAAAGTCTTTTTGAGAAGGTCATCGTTTGATGCTCATATAAACACAAGAAGTAATCTCCCAAACGGAAAGCCTTATCTCGAATGCAACATGTGTAAGAAAAAATTCTGCCATAGTCGTACTTTGGCAGTACACGAAAAGATTCAGCATTATGCTCCTCCTATTTCTGTGACACGATCAGATGAAGGCGAAATAAACTTTcggcaaaataattttcaaactggtAATTTAAAGACATATGAGAGGAATAGGAATCTGAGAGTGAAGGTGCAGAGCAGTGTAATAGTTGTGAAAACTGAACCTGAGAGTGAAATTCAAGATGAAGATAGCCATTTAAATCGGGAGCAGAAGATGTTTGGAAAAGTGAGTGAAAGGGAAAATTCTGTTTTGTCCCCGAttgagatgaaaagaaaggtaagAAGAAAGTCAGAAAGTGGTTCTAGTGCAAGTAATTCTGACTGTACTTCGATGAAAGGTGAAATAGATGttcagcaaattaattttcaaggggTTCATTTGAAGACATATCAAAGGAAAAGGAAGGTAATACGCGGACACATTTTAGATAATTGTTCAAGTCATGCATCAGTAATTGTAAAAACTGAATCTGAGAGTGATATGCAAGATGAAGAaggtatcaatttttttcaagagcaGCAAGGACTTGAAAGAATTACTGAAAGTGAAAACTCTATTTTATTTCCTGTGAAAGAGGAACCTCGTGATCCATTAGATTTAACCGGAAGTGAAAGCGTTTTACTATTTccttcaataaaaaaggaaaccTTCGATCCCTTAGATTTAAGTTACGAAATAGAAGTTTCTGATGTAAAGtccTCACCAAATGGGAAGGAAGATTCTTGGAACGACGTCGTGATTAAATCTGAGCCTCCTGAAATAGATATCGTTGATGAAAAGCACTTGCCAGAAGGCAAAGAATGCCAAAAACAATTAGAAACCGCTGAAAGCTTGAGGATCCACATAGAAGATCATGATCTATTCAAGACTCATATGCTAAGGCACAATCCAGCAGATccctttgaatgtaaattttgcaAGAAAACCTTTGCAGTAAagcgatatttaaaaaaacacatgcTCATTCATGAAAAGAGAGGAGCTCATGTTTGCGATATTTGCTTCAGAGGTTTTACGTACTTATGTAATCTAAACGAgcatttaagaaaacatttggaAGTAAAACCCCGTAAGTGTGAAATTTGTGGATTGGGATTTACTTGTAATGCTTCCCGTGATACTCACATGCGCATTACTCACACTGGAGAAAAGCCTTTCGAGTGCGACATGTGTAAGAAAAAATTCGCCAGCCATTCAAGTGTAAGACGTCATATAATTGGTAATATGAAAGGTGACAGACATTATAAGTGCCCCTCCTGTGTAAAGGGGTTTTCGACCACCGAGGGTTTAGAAAATCACATTCAAGATACCTGTCTCGATAAAACGTGCGAATATGATGTTCTAAGGACGAAGCTTATAATACCCACTGCGCTATTCCACCAACAGAGAAAGGAATGTCGAACTGTGATAACAAGGCTTGAAGACCAAGGCGGGTATCCTTATTTTTGTGACCTTTGCTCGAAATTCTTCCTGAAAAGAGGTTATTTTGATGCTCATCAAAGTCTACACTCAATGAAACAAAGAAACATGTGTAAAATCTGTCGGAAAGTGTTTTCGAAAAGATATAAACTTATGTTGCATCTGAGCAGTGTCAGTAGAGAAAATCCTTACTTTGAATGCGATGTTTGCAAGCTAAAATTCTGCCATAAAAGTACTTTGATAACACACCAAAAGACTCATTTCTACAATGGTTCTCAAGAGATAAATGAAGTTCATAAAATGGGGTATCAGCAGATTACTTTTAAAAGTGCTCCATTGAGGACATATGAGAGGAAATGCACAAGAGAGAAGATGCAGAGGAAAGAAGTAGTTGGTATTGTGAAAATTGAACCTGAGAGTGAAATTCAAGATAAAGAAGATACCAATTTGGTTCAAGAGCAGAGGAAACTTGGAAGATTGGAAAGTGGGTCTGATGCAAATAATTCTAATTCTGATGCTTATCAAAATCTACACCCGATTCAAAGCTTCtacatttgtaaaatttgtagGAAAATGTTTTTCAGCAAAGCGAGCCTTTACGCTCATCAGAAAAGTCTCACTGGAGGGAATCCTTATCTCGAATGCTGCGATTGCAAGCTAAAATTCTGTCATAAAAGTGCTTTAGAAGCACACAAAAAAACTTGTTATCCGAATCTTAAAGTGCCTTCTCagcaaattacttttaaaaatgctcCATTGAAGACTTATTATGTGAGCAAAAAGATGCCTGGTTCGATTAAAGATGGAATGGAGTTTCAGCCAACTAATTTTCAAAGGGGTGTTTTGAAGACGTATGCGAGGAAGAAGAATCCGGGAGAAAAGTTGCAGAGCAAGGAAACAGTTGTAAAAACTGAACCTGATGGTGAAAATCAAGATAAAGAAGATAGCAGTTTGCTTCAAGAGCAGAGGCTGTTTGGAAAATTGAATGAAAGGGAAAACTCTATTTTGTCTACTGTGAAACAAGAACTTCGCGATCCATTAGAGTTGACTGAAGGTGAAAACGCTTTTTTCTTTCCTTCAATAAAAGATGAAACTTTCGATCCTTTAGATTTAAATCACGAAGCAGAATCTTGCGATATAAAGGTCGACTTAGAAGAGTGA
- Protein Sequence
- MAVRIEAELFGIQKTRWFVSQRVDISKRNGQTYGRVCPGPSTSHPLLNPYLLFILEFLPLHLPLGSTEPRVRERVKQIEEEDYVVEIQKRLVDMKYPIEKKDVIASRGVEEGDMRKHVMVHEKRELYICDICSKGFSRKSNLIVHLRRHYDIRPHKCDVCGKGFVHASVCKTHMRTHTGERPFECDICKKKFGLRNTMKLHIIMSHVESNRRYNCLICTKRFKTASRLEVHKLTHSGVKPFSCNVCSKRFTRKNTLRRHENMHLDKKSYKCKTCGKGFNKSVQLTCHMQLCLTGENPYQCDICKIRFSYHSSMKGHILNNMKDGGHRKCPVCLQRFSTTEDLISHIKIHYADERSENEVPRPNHIKSSVLSQKYRNRFICDICAKVFLRRSSFDAHINTRSNLPNGKPYLECNMCKKKFCHSRTLAVHEKIQHYAPPISVTRSDEGEINFRQNNFQTGNLKTYERNRNLRVKVQSSVIVVKTEPESEIQDEDSHLNREQKMFGKVSERENSVLSPIEMKRKVRRKSESGSSASNSDCTSMKGEIDVQQINFQGVHLKTYQRKRKVIRGHILDNCSSHASVIVKTESESDMQDEEGINFFQEQQGLERITESENSILFPVKEEPRDPLDLTGSESVLLFPSIKKETFDPLDLSYEIEVSDVKSSPNGKEDSWNDVVIKSEPPEIDIVDEKHLPEGKECQKQLETAESLRIHIEDHDLFKTHMLRHNPADPFECKFCKKTFAVKRYLKKHMLIHEKRGAHVCDICFRGFTYLCNLNEHLRKHLEVKPRKCEICGLGFTCNASRDTHMRITHTGEKPFECDMCKKKFASHSSVRRHIIGNMKGDRHYKCPSCVKGFSTTEGLENHIQDTCLDKTCEYDVLRTKLIIPTALFHQQRKECRTVITRLEDQGGYPYFCDLCSKFFLKRGYFDAHQSLHSMKQRNMCKICRKVFSKRYKLMLHLSSVSRENPYFECDVCKLKFCHKSTLITHQKTHFYNGSQEINEVHKMGYQQITFKSAPLRTYERKCTREKMQRKEVVGIVKIEPESEIQDKEDTNLVQEQRKLGRLESGSDANNSNSDAYQNLHPIQSFYICKICRKMFFSKASLYAHQKSLTGGNPYLECCDCKLKFCHKSALEAHKKTCYPNLKVPSQQITFKNAPLKTYYVSKKMPGSIKDGMEFQPTNFQRGVLKTYARKKNPGEKLQSKETVVKTEPDGENQDKEDSSLLQEQRLFGKLNERENSILSTVKQELRDPLELTEGENAFFFPSIKDETFDPLDLNHEAESCDIKVDLEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -