Aque019830.1
Basic Information
- Insect
- Andricus quercuspetiolicola
- Gene Symbol
- ZNF236
- Assembly
- GCA_035222095.1
- Location
- JAWWEA010000113.1:40855922-40888986[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.18 54 6.7 4.8 1 23 51 74 51 74 0.97 2 20 1.1e-06 0.00032 23.1 1.5 1 23 184 206 184 206 0.98 3 20 0.001 0.32 13.7 1.4 1 23 212 234 212 234 0.98 4 20 0.00027 0.082 15.6 0.2 1 23 240 262 240 262 0.97 5 20 0.00068 0.21 14.3 6.0 1 21 266 286 266 288 0.95 6 20 0.0067 2 11.2 9.1 1 23 343 365 343 365 0.98 7 20 6.4e-06 0.002 20.7 3.8 1 23 371 393 371 393 0.99 8 20 0.00063 0.19 14.4 5.0 1 23 399 421 399 421 0.97 9 20 0.0001 0.032 16.9 7.4 1 23 427 449 427 449 0.98 10 20 0.16 47 6.9 0.1 2 23 722 743 721 743 0.93 11 20 0.0011 0.35 13.6 2.2 2 23 788 809 787 809 0.97 12 20 0.00046 0.14 14.8 2.2 1 23 815 837 815 837 0.98 13 20 0.006 1.8 11.3 0.0 1 23 843 865 843 865 0.97 14 20 1.4e-07 4.4e-05 25.9 2.3 2 23 937 958 936 958 0.98 15 20 0.26 78 6.2 5.6 1 23 964 986 964 986 0.97 16 20 3.5e-05 0.011 18.4 2.3 1 23 992 1014 992 1014 0.98 17 20 9.2e-05 0.028 17.0 1.9 1 23 1020 1042 1020 1042 0.98 18 20 3.8e-05 0.012 18.2 1.0 2 23 1252 1273 1252 1273 0.97 19 20 0.00012 0.037 16.7 3.3 1 23 1279 1301 1279 1301 0.98 20 20 0.00017 0.051 16.2 5.0 1 23 1307 1330 1307 1330 0.96
Sequence Information
- Coding Sequence
- ATGGACGACCGAAGATGCCAGGAAGTGCAAGCTTTGCCACAAACAGTTTACTCAGCCGGCTTTGTACAGACAACATATTCGAGAACACTACAGgGAAACTTAAACGCCCACATCCACAGGGTGCACAATCTACCGGATGAGGGTCAGATATATGCATGCACTTATTGCTGTTGTGCATTCAGAAAACTAGGCAGTTTGAATGCACATTTGAAGAGAAGACACGCACTTCCCATTGAGGAAGAAAATCCGAAATGTGACAGTTCGACGTCAGACGCAGATATGCAGGCAACTGTGGAAAATGTCATGTCACAGCTTGCTTCTCTTGAATCTGAGGTTAAAAATCATGCGgattcaactgaaaaggataataATGATATTTTGCAACAGGCTTTGCAAAATAGCGGATTGCGAAGTAAAGAAAAACAAGctgaagagGCTAAAAAATCTAAGGGACGAACAATGATGGTCACATTATTAGACAGAAATTCAGATGGCGATGCAAGaaaatatgtgACAATCAAACAACGACATGTTGGCGACATGTTATGGTTCACTTGCACCTTTTGCCAGAAAGAGTTTAAAAAGCCATCGGATCTCATAAGACATTTACGAATTCACACGCAAGAAAAACCGTTTAGGtGTTCTTACTGCAGTCGCACTTTTGCCTTAAAATCAACAATGGTGGGCCATGAACGCACGCATTCTGCCTCCAAGAAATTTCCATGCGGATCGTgcgaaaatgtattttcaactcgGAGTAGTCTTACAGCTCACGCCagGTTGCATACGAGGGCCTTTATGTGTAGCATTTGTAAGAAGTGTTTCAGTGGAAGttccttgttaaaaaatcacatcaAGTGTCACTCAAAGCCTAAAACGAAAATATCTCCAGAGGTGGAAAGTCTTGTTCCCCAGATAGTTTTAAAGGAACCGTTGCTTATCAGCGATGCTGGGAATAAAATTAGCGTAGCTCAAGTAAAATCGAAAAAGCAGCAAGTCTACGAAGGTGGAGATTCAGCGAGGCCCCACAAATGTACGATGTGCAGTGCTGCCTTCAGGAAAACGAGTCACTTGAAACAACACCATCGAAGACACACTGGAGAAAAGCCTTACAAGTGTCCAAAATGTGAcagGAGATTCACTTCGAACAGCGTTTTAAAGTCGCATTTGCACACTCACGAGGATGCGAGACCGCACAGTTGTTCCGTCTGCAATGCAAAATTTACAACGCATAGTAGCATGAAGAGACACCTAATTACACACAGCAATAAAAGGCCTTTCATGTGTCCCTACTGTCATAAAACCTTCAAAACTTCTGTAAACTGTAAAAAACACATGAAAATCCATAAGGCAGAATTGGCTCTACAGCAAGTGGAAAAGCAAAAAATGCAGTCGAAAGTTATCATGATTGTGGACAATCCGAAAGAGAGTCCAGAGAATAAAAAGGAAGACTCGGTACCTGAAACTCTCACTTTAGGGGATGAAATTACGGTGCCATTTCAGACTCAACCTGTTGAATTTACAGATAACTTTTCTGGTCAGTATCAACCCATTGCGGTGCAGGATAAAGACAAAATCCACATTCCAATCTCCGTCGCGGAAAATATCgagaGTATTCGGGAAATAGAAGAAACCTTAAACCAGCAGCTCTTCAATATTGGAATGAACCTCGAATTAGGAAACCCAGTATCAAAACAAACTGAAACAAATTCTTCTCTCGATTCGAGAAGTGAGACCGTCCTCAATATTATTTATGATAGTGATAAAGCCTTAGAATCTGTTAGGAATAGCGAAAATACTCATATATTCACACCACAGTTTGACACTTTCGACATGGGTCAGATCTCCTTACagACAAACGGAGACATGGATGTTGGAATCGAATCGGGAACGACGACTAGCATGGCGAATATTTTGCCCAGATCTGTGCAAGAAAAGCAACATTTGCCTATTCCAGTGACAACTGGATCTGTAGAAATGACTCAGAAACCACTCAAGCATTTAATGGTTGTTAGTCCAATGCAAACTCGGCCCGAACTTTTGAGGCCGGTTCAAGCTTGCAGAAAGTATTCGAAAATTATTGCCAAGGCTGATACAACTAATACGACTGAAGTTCAGACTCTTGAAAATGATTCCAAAGTGGAGGAGGCGAATGCCAGCATATCatgcaCAATATGCAACAAACTATTCGAAAAAGAATTGGATTTAATATATCATGTCGAGGAACACATTACTTCAGCAACGAAAGTAACGCAATCTGCTAAAATTAATTCAATCGGATCTACTGTTCTGCTACACATTGATTCACCAGCGAAAGTTTCTGAACCCGACCAGAATTTAACCGAATCGAATCCTTTGCTCCAGTGTCACATGTGCAGGAAAAACGGTTTCACAGCTTCTGAATTGAAggAACATTTGAGGACTCATCAGGGCGAGAAGGAGTTTGAGTGCATGGAATGTTCACTGAAATTCTGCACTAATGGTGGATTGAGTAGACACTTGAAAATGCACGCCGCTAGGCAACAATATAGATGTATCATATGCGACAAAGTATTACCGAATAAAGTACAAATGGAAGCTCACCTTCGAGGACACAATGAATTATTCGCTGGTGTCGTGGAAGCCGATAGTTCAGAAAAAGAATCGCTCCCTGTAGAAATCAAATTTCAGGAGGTTTCTGATGATAAAAGTTCTTCGAATACAGATGCGAAGATATCGGAACAAATTTTGTTGGACTCTGCAGAGATTATGGAAAGGCTTAAGcTTCAGAGTATGGAAGGTAAAGAAGAAAAGAAACCAGAGAAGAATAAATGCAAATTTTGCCCGAAGACCTTCCGGAAACCTAGTGATCTCACAAGACACATTCGAACTCACACTGGGGAAAGGCCTTACCAGTGTCAATTTTGCAGCAAGAGTTTCGCAGTTAAATGCACACTCGATTGTCACATGCAAGTTCACAGTGGGAAGAAAACTTTCAGTTGTCACGTTTGCAATAGTTTCTTCGCAACAAAGGGAAGTTTGAAGGTCCACATGAGGTTGCACACAGGTTCGAAACCCTTCAGATGTCCAGTTTGTGACATGCGATTCCGGACCTCAGGTCATCGAAAAGTGCACCTCTTGTCTCACGTCAGAGAACAGAAAGAGAACAAGCCCCGGAAGCCGAAGCAGAGAAAAATCGCAGCAATTGCAAGTGTCGTCGCGGATGTGGAAAATGCGATTGAGTCAATCGCCTCCGAAAACATAGTTCAAGATCCTCCACAGGAGGAAACAGAATTTTCGAATGTGGACACGGTTACCATTGACGCTTCCGCTCTTACCGATCAAATCACCTTCAATCCAGATGGAACAGTTTTAAATAACAATTCTGTCCTCTCTGTTAGCGAAAGCAATCAGCTCGTAGCCAATTTGCATTTTCTACTTGCCAACGGTCTCATGACAATCCAACCTGACGGGTTCGTGACATTCCCGGACTCAGTTCTGCCTGGATTAGCTAATTTACAATTGGAGACTTCCCAGGGTGATTTTCTTGAGTCCACAGACTCTGAGAATGTTATAATCACTCAGGAGCCGCATTCCGTTGATTTGGAACAATCAGGGTTCTTGAACTGCACCGCAGTTTTACAAGTCGAGGACAATGGAATGGTTTTGAATTCTAGTATTTCTAATTCTAATATTGCAAATCCCAACATCTCGAATTCCAGTATTCCTAATTCGACTGGGTTTAGAAATTCGAAGGGTGGACCACCAAGGCGAGAATGTGACATCTGCGGAAAGGTCTTTACAAAACCTTGTCAGGTCGCAAGGCACAAAAGGATCCACACTGGCGAGAGGCCTTTTAAATGCGAACGTTGCGACAAAGCCTTCGCCCAGAAAAATACTCTCCTAATGCACCAAAAGCACCACACGGGAGATCGGCCTCATAATTGTCCCTTCTGTACTTATTCTTTTTCGCAGAAGGGAAATTTACATACGCATCTCAAGCGAGTTCATCAACAGGAGTCTCTGGAGGCGAAGAAATTTTGGAAAGGACAGCCACCGAAATTTGTGCAGGAGGCCACAGCCGATAACAGAATTCCGGTTCTTGATGATATCGCGCTTGTCGAGCTTTTGAAGTAA
- Protein Sequence
- MDDRRCQEVQALPQTVYSAGFVQTTYSRTLQGNLNAHIHRVHNLPDEGQIYACTYCCCAFRKLGSLNAHLKRRHALPIEEENPKCDSSTSDADMQATVENVMSQLASLESEVKNHADSTEKDNNDILQQALQNSGLRSKEKQAEEAKKSKGRTMMVTLLDRNSDGDARKYVTIKQRHVGDMLWFTCTFCQKEFKKPSDLIRHLRIHTQEKPFRCSYCSRTFALKSTMVGHERTHSASKKFPCGSCENVFSTRSSLTAHARLHTRAFMCSICKKCFSGSSLLKNHIKCHSKPKTKISPEVESLVPQIVLKEPLLISDAGNKISVAQVKSKKQQVYEGGDSARPHKCTMCSAAFRKTSHLKQHHRRHTGEKPYKCPKCDRRFTSNSVLKSHLHTHEDARPHSCSVCNAKFTTHSSMKRHLITHSNKRPFMCPYCHKTFKTSVNCKKHMKIHKAELALQQVEKQKMQSKVIMIVDNPKESPENKKEDSVPETLTLGDEITVPFQTQPVEFTDNFSGQYQPIAVQDKDKIHIPISVAENIESIREIEETLNQQLFNIGMNLELGNPVSKQTETNSSLDSRSETVLNIIYDSDKALESVRNSENTHIFTPQFDTFDMGQISLQTNGDMDVGIESGTTTSMANILPRSVQEKQHLPIPVTTGSVEMTQKPLKHLMVVSPMQTRPELLRPVQACRKYSKIIAKADTTNTTEVQTLENDSKVEEANASISCTICNKLFEKELDLIYHVEEHITSATKVTQSAKINSIGSTVLLHIDSPAKVSEPDQNLTESNPLLQCHMCRKNGFTASELKEHLRTHQGEKEFECMECSLKFCTNGGLSRHLKMHAARQQYRCIICDKVLPNKVQMEAHLRGHNELFAGVVEADSSEKESLPVEIKFQEVSDDKSSSNTDAKISEQILLDSAEIMERLKLQSMEGKEEKKPEKNKCKFCPKTFRKPSDLTRHIRTHTGERPYQCQFCSKSFAVKCTLDCHMQVHSGKKTFSCHVCNSFFATKGSLKVHMRLHTGSKPFRCPVCDMRFRTSGHRKVHLLSHVREQKENKPRKPKQRKIAAIASVVADVENAIESIASENIVQDPPQEETEFSNVDTVTIDASALTDQITFNPDGTVLNNNSVLSVSESNQLVANLHFLLANGLMTIQPDGFVTFPDSVLPGLANLQLETSQGDFLESTDSENVIITQEPHSVDLEQSGFLNCTAVLQVEDNGMVLNSSISNSNIANPNISNSSIPNSTGFRNSKGGPPRRECDICGKVFTKPCQVARHKRIHTGERPFKCERCDKAFAQKNTLLMHQKHHTGDRPHNCPFCTYSFSQKGNLHTHLKRVHQQESLEAKKFWKGQPPKFVQEATADNRIPVLDDIALVELLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01391385;
- 90% Identity
- iTF_00011366;
- 80% Identity
- -