Aque004203.1
Basic Information
- Insect
- Andricus quercuspetiolicola
- Gene Symbol
- -
- Assembly
- GCA_035222095.1
- Location
- JAWWEA010000003.1:33806263-33816569[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 30 0.0072 2.2 11.1 0.7 3 20 92 109 90 114 0.91 2 30 0.15 45 6.9 0.6 1 23 181 203 181 203 0.90 3 30 0.0017 0.53 13.0 1.9 1 23 221 244 221 244 0.95 4 30 0.0001 0.032 16.9 0.3 2 23 251 272 250 272 0.96 5 30 1.6e-07 4.8e-05 25.8 0.7 1 23 278 300 278 300 0.98 6 30 9.1e-05 0.028 17.1 4.9 1 23 306 328 306 328 0.98 7 30 0.0006 0.18 14.5 0.6 1 20 336 355 336 358 0.93 8 30 1.3e-05 0.0041 19.7 2.5 1 23 366 388 366 388 0.98 9 30 3.4e-05 0.01 18.4 0.5 1 23 394 416 394 416 0.99 10 30 7.1e-05 0.022 17.4 0.3 1 21 422 442 422 443 0.95 11 30 2.6 8e+02 3.0 0.1 1 20 451 470 451 470 0.95 12 30 9.6 2.9e+03 1.2 1.5 1 10 492 501 492 514 0.82 13 30 0.0065 2 11.2 0.1 3 21 522 540 521 541 0.94 14 30 0.022 6.8 9.5 0.8 1 19 549 567 549 570 0.92 15 30 3.8e-06 0.0012 21.4 1.2 1 23 646 668 646 668 0.99 16 30 4.6e-06 0.0014 21.1 3.6 2 23 674 695 673 695 0.97 17 30 7.2e-07 0.00022 23.7 1.6 1 23 701 723 701 723 0.99 18 30 2.5e-05 0.0077 18.8 0.8 1 23 729 751 729 751 0.97 19 30 8.5e-05 0.026 17.1 0.5 1 21 757 777 757 778 0.95 20 30 0.17 52 6.8 1.3 1 23 796 818 796 818 0.97 21 30 0.00013 0.041 16.5 2.2 1 21 824 844 824 845 0.95 22 30 0.067 20 8.0 5.4 1 23 853 875 853 875 0.96 23 30 0.0032 0.99 12.2 3.3 2 23 953 974 952 974 0.97 24 30 0.0057 1.7 11.4 0.4 1 23 978 1001 978 1001 0.95 25 30 0.0023 0.69 12.7 0.2 1 23 1010 1032 1010 1032 0.98 26 30 0.00048 0.15 14.8 0.5 1 23 1038 1060 1038 1060 0.98 27 30 0.00012 0.038 16.6 0.9 1 23 1066 1089 1066 1089 0.96 28 30 0.0059 1.8 11.3 2.0 1 20 1095 1114 1095 1117 0.92 29 30 0.00012 0.038 16.6 2.6 2 21 1124 1143 1124 1144 0.94 30 30 0.0034 1 12.1 4.6 1 23 1151 1173 1151 1173 0.96
Sequence Information
- Coding Sequence
- ATGAATGATGAGCCTTCTGAAATTGATATCGTCGATGAAGTGAATTTCTTGAGAGAAGAACAGAGCCATTTAACCAATTCCTCTAGACAATGCAACAGTACTGTTTCAACAAATGATGAGCGTTCTGAAATTGATATCATCCATGAAATGCATTTCTTGAAAGAAGAACAGAACCATTTAACCAATTGCTTTATAAATAACAGCAGTGATCTTCCATCAAAGGTAGCAGGCACTCTAAAAACACCTATAATAAAACTTCTAAGACTTTATTGGTGCAATAAATGTCAAAAAAGATTCCAATCCGCCGAAACTTTAAAGATCCACACAGAAGAACAGAACCATTTAACCAATTCCTCTACAAAAGGCAATAGTGTTCTTCCGATGAATAATGAACCATCTCAAATTGATACCGCCGATGAAGTGCAGTTCTTGAGAGAGGAACAGAGCTATTTAACCAATTCTTCTATGAAAGACAACGGTGATCTTCCATCAAAGGAAGCAGAAACTCTAAAAACACCTAtaataaaacttccaaaattttatttctgcaaTAAATGCCAAAAAGGATTCGAAACCGACGAAATTTTAAAGATCCACACAGAAGAACATGATCTAATGGAAAAGTCTCTAACTGTCTCAACTGACTCCACTACTATCTCTTACACTTGTCCGACATGCAAAAAAGTTTATAtgaaattcttctatttacaGAAACATATTGAGCTACAGCACAAACCATTTGTTCCACTTGAATGTAAATATTGCCCGAAAACTTTTTCATCAACGCGCGGTTTTATAGGACATATGCTGGTTCATGAAACGGGAGGATCTTACATCTGTGATATTTGCTCCAaaggtttttcgagaaaatctaaTTTGACAGACCATATAAATAGGCACATGAATGTAAGACCCCACAAAtgtaaaatttgtggaaaaggCTTTATTCGTCCATGTTTTCGTAAGGCTCATATGCGCACTCACACTCACCATGGAGCAAAGCCTTTTGAGTGCGATGtatgcaaaaaaagattttcaataaagcgCACTTTAACATTACACATGCCAGTTCATCAACAGGGAGGACTTCGTACGTATGTCTGTGATATTTGCGGTAAATGTTGTATGCGCAGAGGTAATCTCATCGACCATTTAAACAGACACATGGATATCAGACCTTACAAATGTGAAGTCTGTGAAAAAAGGTTTATTGCTGCATATGATCGCAAGGCTCATATGCGTACTCACACTGAAGAAAAGCCTTTCGAGTGCGACATGTGTAAAAGAAAATTCGCCAACCGTGCTAACATGAGACGTCACATAATTCGtacttttgaatgtttcaatcGTTATAAGTGCCCCTCCTGCATAAAGGGTTTTTTGACTATCGAGGCTTTAAAAAGACACATTCCCGGCTGTTTCGATAAATCAAACGAATATAATATTGCAACCACGAAGCGAAGCGGCGATCCTTATTTTTGTGACATTTGCTCGAAATTTTTCCTGTGGAAAGTCTATTTTGACGATCATAAAAATCGACATTCGATTAATAAGACCGTCGCATGTGAAATTTGCGGAAAAGTCTTTTGGAAAAAGTGGGATCTCAAGATCCATCAGAGCAGTCTAACTGAACAAAATCCTTATTTCGAATGcgaaatttgtaaacaaaaattctgtTCTAAAATGGCTTTATTAGGGCACAGTAAGGCAGTGACTTTATTAGGACACTGTGAGACAggtTCACCAAATGTGAAAGAAGAACCATGCAATGATGTAATGATCAAATCTGAGCCTCCTGAATATGATTCCGTTGATGAAAAGCACTTGAAAGAAGAACAGAACATCTTAAACAATTTCTCTATAAAAGGAAAcagtgAAGAACATAATCTCATGGAAAAATCTGCAATTGATCCAACTAGCTCTACTACTAGACCTTTCACTTGCCCTACATGCAAAAAAGTTTTTACGAAACTTGCTACAGTAAAGGCTCATATGCGAAAGCACAAACcacttaatttaaaatgtaaattttgccaGAAAGTCTTTTCAACACAGCGTCATCTTAGAGAACACATGCTCGTTCatggaaagaaaaaatattatgtcTGTGATATTTGCAGCAAAGATTTCACTTTCAAATCTAATCTAAAGGATCATTTGAGAAGACACATGGACGAAAAGAAATTTACTTGCAATATCTGTAACAGGGGATTTATTAGGAAGTACGAGCTTGAACTTCACAAGGTTACTCACACAGGAAAAAAGCCTTTCCAATGTGATGATTGCAAAAAAGGATTCAGCTTCCGGTCTAGTATGAAAGTGCACATAATTCGTAATATGAAAAATGGTGGACACAAAGGACGAGTCAGAAAAAATCCTGTAAATCATGTTTGTGACATTTGCTGTGAGAGTTTTCCGCTAATGTCTGCTCTCGAGACTCATAAATTGACTCACTCGGACAAAAAGCCCTATGAGTGTGAAATTTGCAAAAGATGTTTTGCCGACAAATATAAATTACGGTATCATCAGATACGTCGCCCCAAAGAAAGTCCTTATTTCGAATGTGACATTTGTAAGCTCAAATTCTGCCATAAACGTACTTTTTTTATGCATGAGGCGATTCATTACAAATTTGATTCTCAACCAACTCCTTTGATCAAGGAAGAAATAGACTTGCCGGCAACTGAATGTGAAACCCCTATTTTATCGTCTATGATAGAGGAACAACCTGGTCCATTAAATCCAACTTTTTCATTAAACGCCACAGAAGACTCTCGGAACAACGACAAGATAGAAAATCTCTCTAAGGAAGATAATAATAAGATGCTAAAGAAACGTCGAGAGAGGCAACGATCTGTTTGCGACATTTGCTCTAAAACATTTTCATGTATGAGTAATTTAAGAAACcataaaaagattcacaaaaaacCGTTCCAGTGCAAAATTTGCGCTGAGGAATTTACTAAAGGACAAGAATTGCTGTCGCATATGAATTTTTTGCATGGAGGAACCACTCGTATGAAAACTTTTCCCTGCGACGTTTGCTCAAAAAGGATTTCAACTTTGGGTGCTcttaaagaacataaaaaaatacacttgGATAAAAAGCCGTTTGAGTGTGAAATTTGCGCTAAAGGATTCATCACACGACATAAAATGATATCCCATATGGAAATCCATTCTGGGATTAGACGCTATGCAtgtgaaatttgcaacaaagctttttttcaaaagatcACTTTAAAGTCCCACACCTTGAAAATGCACAACACTAAAAAGCGTTATACTTGTGATTTTTGCCCAAAATTTTATATGACAAAAAGTGAGTTGTATAGTCACAGATGGACACATACAGATAAGAACCGGAACGAGTGTAAAATTTGTGGTAAAAACTTTATTAGGCCTTGTTATTTAAAGAGGCATTTGTGTATTCTCAACGGAGACCAGCCATTTGAGtgtgacttttgtttaaaaacattcaagACCCATCATAATATGAAATTGCACATAATCGGTCATATGAAACTATCAGGAGCGATAGAGGATGAACCGCGCAGACCGAAATTTgtaactgttcattttttgagcCATGCAAAAAGGAAAGTTAGAAGTCGTTCTGATCATACTTATTCGAAATTGAGTCTATATGAACTTGATTGTTCGCCTAGATTGATGCTAGATGAGAAGGACCCGTTAAAGTTAGATGAAGACGTTCAGATAAAGCATGAAAAAGcagtaaatgaaattaattaa
- Protein Sequence
- MNDEPSEIDIVDEVNFLREEQSHLTNSSRQCNSTVSTNDERSEIDIIHEMHFLKEEQNHLTNCFINNSSDLPSKVAGTLKTPIIKLLRLYWCNKCQKRFQSAETLKIHTEEQNHLTNSSTKGNSVLPMNNEPSQIDTADEVQFLREEQSYLTNSSMKDNGDLPSKEAETLKTPIIKLPKFYFCNKCQKGFETDEILKIHTEEHDLMEKSLTVSTDSTTISYTCPTCKKVYMKFFYLQKHIELQHKPFVPLECKYCPKTFSSTRGFIGHMLVHETGGSYICDICSKGFSRKSNLTDHINRHMNVRPHKCKICGKGFIRPCFRKAHMRTHTHHGAKPFECDVCKKRFSIKRTLTLHMPVHQQGGLRTYVCDICGKCCMRRGNLIDHLNRHMDIRPYKCEVCEKRFIAAYDRKAHMRTHTEEKPFECDMCKRKFANRANMRRHIIRTFECFNRYKCPSCIKGFLTIEALKRHIPGCFDKSNEYNIATTKRSGDPYFCDICSKFFLWKVYFDDHKNRHSINKTVACEICGKVFWKKWDLKIHQSSLTEQNPYFECEICKQKFCSKMALLGHSKAVTLLGHCETGSPNVKEEPCNDVMIKSEPPEYDSVDEKHLKEEQNILNNFSIKGNSEEHNLMEKSAIDPTSSTTRPFTCPTCKKVFTKLATVKAHMRKHKPLNLKCKFCQKVFSTQRHLREHMLVHGKKKYYVCDICSKDFTFKSNLKDHLRRHMDEKKFTCNICNRGFIRKYELELHKVTHTGKKPFQCDDCKKGFSFRSSMKVHIIRNMKNGGHKGRVRKNPVNHVCDICCESFPLMSALETHKLTHSDKKPYECEICKRCFADKYKLRYHQIRRPKESPYFECDICKLKFCHKRTFFMHEAIHYKFDSQPTPLIKEEIDLPATECETPILSSMIEEQPGPLNPTFSLNATEDSRNNDKIENLSKEDNNKMLKKRRERQRSVCDICSKTFSCMSNLRNHKKIHKKPFQCKICAEEFTKGQELLSHMNFLHGGTTRMKTFPCDVCSKRISTLGALKEHKKIHLDKKPFECEICAKGFITRHKMISHMEIHSGIRRYACEICNKAFFQKITLKSHTLKMHNTKKRYTCDFCPKFYMTKSELYSHRWTHTDKNRNECKICGKNFIRPCYLKRHLCILNGDQPFECDFCLKTFKTHHNMKLHIIGHMKLSGAIEDEPRRPKFVTVHFLSHAKRKVRSRSDHTYSKLSLYELDCSPRLMLDEKDPLKLDEDVQIKHEKAVNEIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -