Aque017262.1
Basic Information
- Insect
- Andricus quercuspetiolicola
- Gene Symbol
- ECU06_1150
- Assembly
- GCA_035222095.1
- Location
- JAWWEA010000101.1:30844909-30859570[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 5.7e-05 0.017 17.7 1.3 1 23 317 339 317 339 0.98 2 27 2.6e-06 0.0008 21.9 1.0 1 23 345 368 345 368 0.96 3 27 0.0083 2.5 10.9 0.3 1 23 374 396 374 396 0.97 4 27 0.002 0.6 12.8 2.7 1 23 402 424 402 424 0.96 5 27 0.0029 0.88 12.3 1.4 1 23 430 452 430 452 0.97 6 27 5.2e-05 0.016 17.8 5.7 1 21 458 478 458 479 0.95 7 27 0.019 5.8 9.8 1.2 1 21 519 539 519 540 0.94 8 27 0.71 2.2e+02 4.8 0.6 1 23 571 594 571 594 0.88 9 27 0.0018 0.56 13.0 2.4 1 23 623 645 623 645 0.98 10 27 0.00012 0.038 16.6 1.7 1 23 651 674 651 674 0.97 11 27 2.1e-06 0.00063 22.2 0.4 1 23 680 702 680 702 0.98 12 27 2.4e-07 7.4e-05 25.1 0.6 1 23 708 730 708 730 0.99 13 27 8.2e-05 0.025 17.2 1.5 1 23 736 758 736 758 0.98 14 27 0.00022 0.068 15.8 2.4 1 23 764 786 764 786 0.97 15 27 0.00019 0.059 16.0 3.3 2 23 793 815 792 815 0.94 16 27 0.00015 0.045 16.4 1.2 1 23 884 906 884 906 0.98 17 27 3.5e-07 0.00011 24.6 0.7 1 23 912 935 912 935 0.96 18 27 0.0021 0.65 12.7 0.5 1 23 941 963 941 963 0.96 19 27 5e-06 0.0015 21.0 1.2 1 23 969 991 969 991 0.96 20 27 2.4e-05 0.0073 18.9 2.0 3 23 999 1019 999 1019 0.99 21 27 0.34 1e+02 5.8 0.0 1 13 1054 1066 1054 1070 0.88 22 27 6.4e-05 0.02 17.5 0.8 2 23 1173 1194 1172 1194 0.97 23 27 0.0076 2.3 11.0 4.5 1 23 1200 1223 1200 1223 0.96 24 27 7e-05 0.021 17.4 0.3 1 23 1229 1251 1229 1251 0.97 25 27 0.00022 0.066 15.9 3.3 1 23 1257 1279 1257 1279 0.96 26 27 0.92 2.8e+02 4.4 3.1 1 23 1285 1307 1285 1307 0.93 27 27 3.8 1.1e+03 2.5 1.7 1 10 1313 1322 1313 1326 0.89
Sequence Information
- Coding Sequence
- ATGGAATCTCAAAATTCAGAGATGATAACTCCCTACGATGAAGATGAAATAGCCGAGAAGCCTCATACTGAAAGCGAGGGAGAATATTTTCTAGTACCCGATATTCCTGATcCTAGTGGCACTAGTTCAGGAAGGCGTAAAAGTAAAATGGAATCCCAAAAGTCAGAGATGTTAACTTCCTGCGCTGAAGATGAAGTATCCGAGAAGGCTCATACTGAAATCGAGGGAGAATATTTTCTAGTACCCGATATTCCTGAAAATGTTGAAGAAGACATCCAGGTCGTCGTCGCGGAAGAAAATCCATCGATATCTCAAATGTGCAGACTATGCGCTTCCGTAAACGATCATTTGGTTCCAATTTTTAAAAGCGATGGACTCGAACatgatttatgtaaaaaaatagataaacatcTACCTATAAAAgtGACTGAAGACGATACTTTACCTCTTCAAGTATGTTATCACTGTGCCGCTACTTTGCTAGCCTGGGATGAACTTTCCGATGGTTGTTTAAAAGCTCAAAATCAACTTTTACTACTTCAGGAACAACAAAGGCGTTCACAGGTTGAAGAAGAAAAAACTCAGGTGCTAGAAGAAACTGTGAAAGTTGCCGAAAAATCTGTTATCCGAATGTCCGGAGTCAAGTTTCGACTATTTTGCAGGTCCAGTAGAGCCCAGACATCATTTAAAGTATTCATTGATGCGCAAAATATACTTCGGAGGAAAAGGAAAATCATGGAGAAATCGATTCTAAACAACCCAATTTGTGAAGAGTCAGGAGACGGGAAAGATGAATTGAAGCACGAAGATCAAGGCGAAGAATCGGAATTTCAAATCGGTTGGGAACTGACCAACAGCGATGGTGAGNNNNNNNNNNNNNNTGAGCAGAAATTCGAGTCTGAGATTGAATTAAATGATCACGCAAAACTTCACAACTCCCAGAAATGTTATAGATGTCGAGAATGCGGAAAGGGCTTCAAACTCAAGGATTCCTACGTCCGACACAGTCGAATTCACAAAGATGAGCGGCCTTATACTTGTCACGTTTGTGGAAAACAATTCCGAGATTCTGGAGGACTTTCTCGTCACTTGAAGGATGTTCACGCTAAAGTCAAAAATTTCGCCTGCGATCTTTGTGGAAGCAGTTTCGCTTCAAAGGCTACTAGAGATGATCATCGAAGAACTCACACTGGCGAAAGACCCTACGTTTGTGATTGTTGtggaaaaactttcaaatctaaGGCTTCCCTTTATATTCACAGCAAACTTCACACCGATGAGTTTCCTCATCCGTGTGCCTATTGCGCGAAGAAATTTCGAAGAAGGCAGGAGATGTTGGCTCATGTGACAACGCATACTGGTGAGAAAAACTATGTTTGTGATGTTTGTCACAAATGTTTCCGGGTCAAGTCAGAACTCCGAAGACATCAGTGCAGCGCGCCGAGGACATCTTTCGCGACCTACTGTTCCATTAAGCCTAGAAGACCTGAATCCCAAGAGTCACTGAAAACCGAACTTCAGGATTCAACTCCGATCTCAACAGTTTCCCAAGAATATTCCTGTGAAAACTGTCGTTCGACTTTCAAACGAAAATCCCTTGTGAAGTATCATCTCCTCAACTGTTCTTCAAATACCCAAATGAAAATAGAAGAAAGCCAAGGAAAGGAAAATGAGTCTTCCAATCGGCGCAGAAGAAAGCGTCAGAAATCATATCCTTGCATGCACTGCGATTACGAAACCAAGAGGAAAAAGATCCTAGATGCTCACACATTAGAGGCTCATCCAGAGTTGATACCGAATAACAAAAGAAGCATCGATAAAGAAGCAGTTGACCGAGCAAAAATGGAAGTTGACGGTAAAATCTACTACCACTGCACCGAGTGCGGTAAAAATCTCTACTCTCCGTACACTTTTTCCTGGCACAAGCGAATCCACACTGGTGAAAGACCCTTTACCTGCCACCTCTGTGGGAAACAATTCCGAGTTAATCAGGGCTTGGGTCGTCACCTACGAGAAACTCACGCCAGGATCAAAAAATTCCCCTGCGATATTTGCGGGCGAATGTTTACTACGAAACGGAATGTTGAAGATCATCGAAGAATCCACACAGGAGAGAGACCTTATGTCTGCAATATTTGCGGAAAAGCCTTCAAACAAAAGGCCTCACTATTTGTCCACAATCGCACTCACTCGGATTTGTTTCCTTTTAAGTGTTCGTACTGCAACCAAGGATTTAGAACGAAAACCCCGCTGATGGTTCACATAACAAAGCACACTGGCGAAAAACCGTACGCTTGTGACATCTGCAATCGACATTTTAGAATCAAATTTGAGTTGAAGAGACATCGACTTGTTCACTCGGATGAAAAACCCTGGCGATGCAGTGACTGTGACCAGTGTTTCAGACAAAAGAGGTATCTTGTTAATCACAGGAAAGCTAATCACGTCGCAATTGCGAAAGAGTCGGAACTGAATCAAAAAGAGAATGGATTTATCTTCGTCGAATTGATAGAAGACCATGAAGGAGTGAATAAAAAGCCAGGATCTAAATCCAAACGTAAACGGATGCATTTACTACACGAGGATTTCAGCCTGAATCGACGACTTGAACTTAATAAAGTCAAGACTGTCGTTGAGGGGATAACATACTACAAGTGTCCTGATTGTTCCAAGAGTCTCAGAAGTATCTACAATTATTTCGTGCATCGAAGAGGTCATCTCGGCGAGCGACCCTTTACTTGTCACGAGTGTGGAAAAAGTTTCCCCTCTCTTTCCGGCCTCAATCGACACGTCCGTGATGTTCACGTAGGTTTGAAGAAACACAAGTGTGATATTTGCGGTAGACCTTTTGCCTCCAAAGTTGCCAAAGACGAGCACAGACTTACACACACTGGGGAGAGACCTTATGTCTGTGAAATCTGCGGAAAGGCCTTCACCCAAAAAGCCTCTCTGCATGTGCACAAGCAATTCCACTCGGAGGATTTGTCCCATTGGTGCACGATGTGTAATCGAGGATTTAAGAGAAAGCAGGAACTCAACAAGCACATTTTGACGCACACCGGGCAAAAACCGTTCGCTTGTGGAAAATCATCGCTGAAGAAGAGAGATTTACTGGCGAGGATCAGACACATTAGAAGTGTTCATGAGGGTTTGAAATCTTATGCTTGTGATCTGTGTGGCAGAGCTTTTGCAAGCAATATTCCCTTGATGATCATCGACGTATTCATGCTGGCGAAAGACAAGCACTTGTCAGCGTTGTCGAAAAGTATTCCTTTTGTGGGAGAGGCTTCCAGAACCGGCAGCTTTCTACAACGTTTAGAAACATTAAACAACGCAAAGAAGAGTTCTTCTACGCCAAAAACGTCTTCCGAATctagagaagaatttttgactgaaaaattgatTAGAACAAGAGTGAATCCAGTTATCTCGAAGACTGGAAATAAACCAGCAGAAAAGTCGAAACTTCCAAAGAATCCGCAAAAAGAAGCTAAAAATTGCATCGTGGATCCGTTGGAGTGTGATCAATGTGGGAAAAAATTTCGATTACAGGAGAGTTTCCGTACACACGCGCGAATCCACACTGGTGAAAAAGCCTACACTTGTCACGTTTGCGGAAAGCAATTCGGACAAACTGGAAGTTTTTATTATCATCTGAAGCACGTGCATGGAGGTGTGAAAAATCACTCGTGTGATATCTGTGGTCGAAGTTTTGCCATGAAGGCCGCTATGGAAGATCATCGAAGAATTCACACCGGAGAACGTCCCTACGTTTGTGATTCTTGCGGAAAAACCTTCAAAACCAAGGCTTCCCTTTATATTCACTGCAAAACACACACGGACAATTATCCTCATCAGTGCAGTTTCTGCAAAAAAGGATTCCGATGGAGACAACAAATGCTGGGTCATCTGACAACCCACACTGGTGTCAAAAATCACATCTGCGAGACTTGCGGAAAGGCTTTTGGGTTTTGCGCAAAAGAGGTATCTGAAAAGCCACGAACGAACTAA
- Protein Sequence
- MESQNSEMITPYDEDEIAEKPHTESEGEYFLVPDIPDPSGTSSGRRKSKMESQKSEMLTSCAEDEVSEKAHTEIEGEYFLVPDIPENVEEDIQVVVAEENPSISQMCRLCASVNDHLVPIFKSDGLEHDLCKKIDKHLPIKVTEDDTLPLQVCYHCAATLLAWDELSDGCLKAQNQLLLLQEQQRRSQVEEEKTQVLEETVKVAEKSVIRMSGVKFRLFCRSSRAQTSFKVFIDAQNILRRKRKIMEKSILNNPICEESGDGKDELKHEDQGEESEFQIGWELTNSDGEXXXXXEQKFESEIELNDHAKLHNSQKCYRCRECGKGFKLKDSYVRHSRIHKDERPYTCHVCGKQFRDSGGLSRHLKDVHAKVKNFACDLCGSSFASKATRDDHRRTHTGERPYVCDCCGKTFKSKASLYIHSKLHTDEFPHPCAYCAKKFRRRQEMLAHVTTHTGEKNYVCDVCHKCFRVKSELRRHQCSAPRTSFATYCSIKPRRPESQESLKTELQDSTPISTVSQEYSCENCRSTFKRKSLVKYHLLNCSSNTQMKIEESQGKENESSNRRRRKRQKSYPCMHCDYETKRKKILDAHTLEAHPELIPNNKRSIDKEAVDRAKMEVDGKIYYHCTECGKNLYSPYTFSWHKRIHTGERPFTCHLCGKQFRVNQGLGRHLRETHARIKKFPCDICGRMFTTKRNVEDHRRIHTGERPYVCNICGKAFKQKASLFVHNRTHSDLFPFKCSYCNQGFRTKTPLMVHITKHTGEKPYACDICNRHFRIKFELKRHRLVHSDEKPWRCSDCDQCFRQKRYLVNHRKANHVAIAKESELNQKENGFIFVELIEDHEGVNKKPGSKSKRKRMHLLHEDFSLNRRLELNKVKTVVEGITYYKCPDCSKSLRSIYNYFVHRRGHLGERPFTCHECGKSFPSLSGLNRHVRDVHVGLKKHKCDICGRPFASKVAKDEHRLTHTGERPYVCEICGKAFTQKASLHVHKQFHSEDLSHWCTMCNRGFKRKQELNKHILTHTGQKPFACGKSSLKKRDLLARIRHIRSVHEGLKSYACDLCGRAFASNIPLMIIDVFMLAKDKHLSALSKSIPFVGEASRTGSFLQRLETLNNAKKSSSTPKTSSESREEFLTEKLIRTRVNPVISKTGNKPAEKSKLPKNPQKEAKNCIVDPLECDQCGKKFRLQESFRTHARIHTGEKAYTCHVCGKQFGQTGSFYYHLKHVHGGVKNHSCDICGRSFAMKAAMEDHRRIHTGERPYVCDSCGKTFKTKASLYIHCKTHTDNYPHQCSFCKKGFRWRQQMLGHLTTHTGVKNHICETCGKAFGFCAKEVSEKPRTN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -