Basic Information

Gene Symbol
-
Assembly
GCA_035222095.1
Location
JAWWEA010000003.1:12544842-12569553[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 31 4.5e-05 0.014 18.0 3.0 1 23 116 139 116 139 0.97
2 31 0.009 2.7 10.8 1.8 2 23 146 167 145 167 0.96
3 31 1.8e-06 0.00055 22.4 2.7 1 23 172 195 172 195 0.98
4 31 0.0016 0.47 13.2 2.8 1 23 198 221 198 221 0.97
5 31 0.0023 0.71 12.6 0.6 1 23 226 248 226 248 0.97
6 31 0.00012 0.037 16.7 0.6 1 23 254 276 254 276 0.97
7 31 0.0013 0.39 13.4 0.3 2 23 640 662 640 662 0.95
8 31 0.00015 0.046 16.4 0.1 3 23 698 719 697 719 0.95
9 31 9.3e-05 0.028 17.0 0.3 3 23 730 751 729 751 0.93
10 31 2.9e-05 0.0088 18.6 3.1 1 23 756 778 756 778 0.98
11 31 3.2e-06 0.00097 21.6 2.6 2 23 785 806 784 806 0.97
12 31 1.4e-05 0.0042 19.6 0.7 1 23 812 834 812 834 0.98
13 31 0.022 6.7 9.6 2.9 1 23 972 995 972 995 0.94
14 31 1.8e-05 0.0055 19.3 0.2 1 23 1001 1023 1001 1023 0.97
15 31 4.3e-05 0.013 18.1 4.3 1 23 1029 1051 1029 1051 0.99
16 31 0.00029 0.09 15.4 1.1 1 23 1057 1079 1057 1079 0.98
17 31 2.5e-05 0.0075 18.8 2.2 1 23 1085 1107 1085 1108 0.96
18 31 0.0083 2.5 10.9 7.9 1 23 1121 1143 1121 1143 0.98
19 31 0.003 0.93 12.3 1.3 3 23 1154 1174 1153 1174 0.98
20 31 1.2e-07 3.6e-05 26.1 0.2 2 23 1181 1202 1180 1202 0.97
21 31 1.6e-05 0.0048 19.4 0.2 1 21 1208 1228 1208 1229 0.96
22 31 0.66 2e+02 4.9 0.9 2 23 1236 1258 1235 1258 0.96
23 31 1.1e-05 0.0033 19.9 0.9 1 23 1264 1287 1264 1287 0.98
24 31 0.021 6.3 9.6 0.2 2 23 1293 1315 1292 1315 0.96
25 31 0.046 14 8.5 0.1 1 23 1320 1342 1320 1342 0.97
26 31 0.21 63 6.5 2.7 1 23 1348 1371 1348 1371 0.89
27 31 2.9e-05 0.009 18.6 3.0 1 23 1388 1411 1388 1411 0.95
28 31 0.0017 0.52 13.1 0.1 1 23 1422 1444 1422 1444 0.96
29 31 0.024 7.2 9.5 3.6 1 23 1450 1472 1450 1472 0.94
30 31 1.8e-06 0.00054 22.4 1.1 1 23 1478 1500 1478 1500 0.98
31 31 0.00038 0.12 15.1 0.2 1 21 1506 1526 1506 1527 0.93

Sequence Information

Coding Sequence
ATGTTAGCAGAACCAAATAAATTATTGCATTTtttcaagatCGCCTGCAAGCCTTGGACGATTGAAAAGGTTTCTGATAAAAACAACGAGATTAGTGTCGAATATAAGGAAGAATGTCTGGAAGAAAACCGACTCTACATCCACGACAGAAACCAGGCAGCCTTCTTCTATTCGAATGGGCCCTTCACTTCTCAACTCTTGGAAAAGAATCCACTGAGTCTTTCCGATTTTATAAACCATTCATCCATCCAGTACGAAAGGAGCATCTACAATCAGACCAATCCACTCGCTGATGGTCCACCTCTTCCTCTCGAATGTGTCTTGCTGGAAGAAAAGCAGACAACTTTTCCATGTGAACTCTGTGATAAggttttcaaatacaaaagagGTATGCGAGAACACATGAGACGCTGTCATACCGACACAGCACTCGTGGAATGTACCATTTGCGGATCCAAGTGCACAAAATTTTCTTTGGCTCGTCATATCAGAACCCAGCACATGAAGTCTGCCTTCGAGTGCAAAAAATGTGGTAAAAACTTCGACAAGAAGGAGAACCTCGAGACCCATACACGCACCAAACACAAAAAGTATCACTGCCTCTTCTGCAAGAAGGTGTTTCCGGACAACCAGAAGGTCACATCCCACATGAGGATCTACCACGATTTGAGACCTTATCCCTGTCCGGCTTGTAATAGACCTTTTACGACCAAACAGGGGATGCATCAACATCTTCTTCTGCATACTGGAAAACGACCGTATGCTTGTGATATTTGTGGAGAAACGTATATTCAGAAATCTAATCTCAACTTTCATAGGAAGAGCCATCCTGGACCACTTCCTCCCGTTCAGCCTACTTCTATAGCTcatattgtcaaaaaattcacCCAGTTGTTGGAGTACAAACGTCGAAGACAGGGGAAGGACAAGAAAAAAAAGAGCAGTGAGAGAAGGATTGATGAAGATCTTATTCTTAATATAGAGATAGATGCTGAAAAGGAGATGGATGCTGAAAAGGAGATGGCTGCTGAAAAAGAAATGGATGCTGAAAAGGAGATAAATGTTGTGAAGGAGATCATAGAAAAGGAAATGGCTGCTGAAAAGGAGATGGATGCTCTGAAGGAGATCATACAAAAGGAAATGTCTGCTGAAAAGGAGATGGATGCTGTGAAGGAGATCATAGAAAAGGAAATGGCTGCTGAAAAGGAGATGGATGCTATGAAAGAGATAATAGAAACAGAGTCTGGTAGGATCAGTgagattaatattaatttgaaggaAAGGGAGGAGAGCAAGGAAAAAAGAGAGAGTATTCAAAATGAGGAAAAATCTGAGGATAAGATGGATAATGAAGAGTTAgcAGAAGAAAATCAACCACAAACTAAAAACTCTCCCATTTTGCGTGTAAAGTCACTCGCAGAATTAGGAGATCCACAGAAGACGACTTTGGTACCAAATCCTCACATACAGAAACATTTGGTTCGTCTCGTAAAATCAAACTTACCCGATCATGTGGGTAAAAGGTTTATGTTGAACACAAGTTCGACAGGGGTCAAATATTTAACTCCCATAAGTCCTGATCTTCAAGGTCAAGCAGGAAAGAGATTTTTCGTGATGAAGAATTCACCTTCAACGAATCAACCAACTTTGGTAATGCAAGCAATACAGGAACCAGTTCCAGAAAAACATCTTctaaaaatgcaagaaatttcACAACCTGTTTACAAAGAGCCAACAATCTCGACAAAGCTGCACATTTTGAAGACGCAATCCACGGCGAAAGAACTTGCGTCAACGGAAGCTGCACCAATAAACTGGAGCGAATCATCATCTCCGTCTTCATTCACTTGTGCTCATTGCATGGTGGTATATCCGTCGGATTTAGCTCTTGCTAATCATTTGAAGGTGCTGAGACGTCAGTGCAATTCTTGTAAGAAAGTCTTCAAGTCAGTTCCAGCTTTGTGGAAGCATTTGAAGGGAGTCCACAGAATAAAAGGATACAGGTGCAAAAATTGTGACTACCTCGGAACCTGCATGTGGGATCTGAAACTTCATCAGGCCAGGGATCACTGCCAGGATTATACGAATCCTTGTAACGAGTGTGATAAAGTATTCAAGAATGCTGAAGTTTTGGAACAACATGTTAAGCTGGTGCATCAAAATCCTTCTTCTTCGTCGAATCTTCTTTGTGAGGTGTGTGGGAAACCGTTCAAGAATTACTACACGCTCCAGCGTCATAATGAAAGTGCCCACGAGAACAACCAATATCCTTGCAAGGAATGTGACAAGGTCCTCTGTTCTAAGTACTCATTTACTCGGCATTTGAGGTGGCATGCTAATAAGGAAAAAATAGTTTGTGAACATTGTGGAAAGTCATTCACTATTAAGCATGAACTTCTGGTTCACATGAGAAAACACACTGGTGAGAAGCCTTACCAGTGCAGCATTTGTAGTAAAGCTTTTGCTAAAAGAACTACTTTGAGACAACATCTACTCATTCATACTGGAGTCAGACCTTACcaCAGTAGAATAATAATTCCTCCTCCTCCACATCCTCCCCCTTTACATTCTCCTCTTCCACATCCGCCTCCTTCTCCACATCCTCCTCAAACTTCACATCCTCCTCCTTCACATCCTTCTCCACATCCTCCTCCTTCATGTCCTCTTCCTCCTTCACCTCCTTCTCCCCACCCTCTTCCTTCAcgCAGTAGAATAATAATTCCTCCTCCATGTCCTCCACATCCTCCTCCTTCACATCCTCCTCCTTCACATCCTCCTCTTCCACATCCGCCTCTTTCTCCACATCCTCCTCCTTGTCCATATCCTCCTCCTCCCCACCCTCCTCCACATCCACCTCCTATCATCCTCGTACTGTTTTGCAGCACCCAGAAGACAGGCAGTCGGCGAGCCTTACATGACTGTAGAAAATGTGGCATTACATTTCGTCACGTATGGAAATTAGTAGAACACCTGAAAAATTCTCACGGAATCAATCAAGGTTTTAAATGTGACGAGTGTGGGAAGGCTTTCCGAAGTCCAATGAATATTGCTCGACACAAATTACTCCACACCGGGGTAAAACGGTACACTTGCGATATATGCGATTACTCTTGTTACCAAAAAACAAATCTGGAATATCATCAACGAAGACACTCAAAAGACTACTTCTACATTTGTGAGATATGCACAAAGGGATTTCATCAGAGGAAAGAACTAATCGAACATGAAAATACTCATTCTGGTATCAAACCCTATCAGTGTCAATTGTGTGAAAAGTCTTATCCATACAAGAAAAATTTGGTCTCCCACATCAAGGTTCATCATCCTGAAATGACCAGGACAAGAACGAGGAGCTATAAACATAAATGTCAATTTTGCAAGGAAAGATTTTGCAATAAGAAGTTACTTCAGCAACATGCCAAAATGCATCAGAGTTTGCCGAAAAGTTCGAAAGTTTTGTGCGATTTGTGTGGTCAGCAGTTGTCCTCAAGAAGTGCACTTACTCATCATCTGAAACTTCATTCTGGAGAAAAATCTGTCAGCTGTAATATTTGTGGAAGAGCTTTTGCTAAGTGGGATAATTTGAAGGTTCATCAGAGAACACACACGGGAGAGAAGCCATTTATTTGCTCGCTGTGTGGGAAAGCTTTTTCACAAAAATCCACACTTGTTCTTCATCTTAGATTCGAAAACAGTGGTGGAAAGTCCTGCGAATTCTGCGAAGAAAGATTCCACTTCGTCACCAGATTAGTAGCCCATTTGCGAATAGCTCATGGAATCCTCAGACCCTTCAAGTGCGACAGCTGTGGGAAAACCTATCCTCAACAATTTATGTTGAACGCCCACATTAAAAAATCCCATACACCGAAAATTGTGCCTTGCAATCAATGCGACTTCATGGGAGTCTCAAAATCAGATGTAGAGCGACACCGAAAGAGGGCCCACAAGGAGGTGAAGTTCATCTGCGAAATTTGCAGTGAAGTCTTCCTCACCGAAGAATTATTGATGACACATACCACCATGCACGAATTTATGCAATTTCATCAATGCAACGCCTGCGGGAGTACCTTCGATGATCTCTACACTCTCCGAGAACACAATCATCTTTATCATTACAATGCGGATCTAGGAACAGCAAAACAAAACGAGGAACCACCGCAACACAGATGTGAAATTTGTggcaaaacttataaatatcgaTCTATGCTGAAGCAGCACAAAATAAAGGGTCACTCAGACCCTGTGGCTTGTGAGAGGCGGAGGTACCTCTGTGCTCTTTGTGGAAAGGAACTCAAAACTGCTAAAGGTCTCGAGATTCATACAAGATCACATACAGGGGAAAAGCCATACACCTGCGAAGTTTGTGGAAAATGTTTTGCTTGTGAGACTTTATTGAGAACCCATAGTGTTACCCATACGGGGGAAAGAAAATATTCCTGTGATCAGTGTGGCAAAGCTTTTACTCAGAGGTCGACACTTGTTGTTCATAAGAGGTACCATAGTGGAGAGAGACCTTATCTGTGTCCCAAATGTGGTAAAGGCTTTGTTACAAGAACTGTACTTAATACTCATTTAAAATCATGCCGCTTATGA
Protein Sequence
MLAEPNKLLHFFKIACKPWTIEKVSDKNNEISVEYKEECLEENRLYIHDRNQAAFFYSNGPFTSQLLEKNPLSLSDFINHSSIQYERSIYNQTNPLADGPPLPLECVLLEEKQTTFPCELCDKVFKYKRGMREHMRRCHTDTALVECTICGSKCTKFSLARHIRTQHMKSAFECKKCGKNFDKKENLETHTRTKHKKYHCLFCKKVFPDNQKVTSHMRIYHDLRPYPCPACNRPFTTKQGMHQHLLLHTGKRPYACDICGETYIQKSNLNFHRKSHPGPLPPVQPTSIAHIVKKFTQLLEYKRRRQGKDKKKKSSERRIDEDLILNIEIDAEKEMDAEKEMAAEKEMDAEKEINVVKEIIEKEMAAEKEMDALKEIIQKEMSAEKEMDAVKEIIEKEMAAEKEMDAMKEIIETESGRISEININLKEREESKEKRESIQNEEKSEDKMDNEELAEENQPQTKNSPILRVKSLAELGDPQKTTLVPNPHIQKHLVRLVKSNLPDHVGKRFMLNTSSTGVKYLTPISPDLQGQAGKRFFVMKNSPSTNQPTLVMQAIQEPVPEKHLLKMQEISQPVYKEPTISTKLHILKTQSTAKELASTEAAPINWSESSSPSSFTCAHCMVVYPSDLALANHLKVLRRQCNSCKKVFKSVPALWKHLKGVHRIKGYRCKNCDYLGTCMWDLKLHQARDHCQDYTNPCNECDKVFKNAEVLEQHVKLVHQNPSSSSNLLCEVCGKPFKNYYTLQRHNESAHENNQYPCKECDKVLCSKYSFTRHLRWHANKEKIVCEHCGKSFTIKHELLVHMRKHTGEKPYQCSICSKAFAKRTTLRQHLLIHTGVRPYHSRIIIPPPPHPPPLHSPLPHPPPSPHPPQTSHPPPSHPSPHPPPSCPLPPSPPSPHPLPSRSRIIIPPPCPPHPPPSHPPPSHPPLPHPPLSPHPPPCPYPPPPHPPPHPPPIILVLFCSTQKTGSRRALHDCRKCGITFRHVWKLVEHLKNSHGINQGFKCDECGKAFRSPMNIARHKLLHTGVKRYTCDICDYSCYQKTNLEYHQRRHSKDYFYICEICTKGFHQRKELIEHENTHSGIKPYQCQLCEKSYPYKKNLVSHIKVHHPEMTRTRTRSYKHKCQFCKERFCNKKLLQQHAKMHQSLPKSSKVLCDLCGQQLSSRSALTHHLKLHSGEKSVSCNICGRAFAKWDNLKVHQRTHTGEKPFICSLCGKAFSQKSTLVLHLRFENSGGKSCEFCEERFHFVTRLVAHLRIAHGILRPFKCDSCGKTYPQQFMLNAHIKKSHTPKIVPCNQCDFMGVSKSDVERHRKRAHKEVKFICEICSEVFLTEELLMTHTTMHEFMQFHQCNACGSTFDDLYTLREHNHLYHYNADLGTAKQNEEPPQHRCEICGKTYKYRSMLKQHKIKGHSDPVACERRRYLCALCGKELKTAKGLEIHTRSHTGEKPYTCEVCGKCFACETLLRTHSVTHTGERKYSCDQCGKAFTQRSTLVVHKRYHSGERPYLCPKCGKGFVTRTVLNTHLKSCRL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-