Aque022918.1
Basic Information
- Insect
- Andricus quercuspetiolicola
- Gene Symbol
- -
- Assembly
- GCA_035222095.1
- Location
- JAWWEA010000115.1:40431612-40432046[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.4e-09 1.4e-05 26.9 0.2 5 39 1 35 1 38 0.95 2 2 3 4.9e+03 -0.5 0.0 30 43 103 116 103 117 0.87
Sequence Information
- Coding Sequence
- ATGGCCGAAGCTGTCGCAAAAGTCAAGTCCAAAGTAATGAGCTTAAGAGAGGCTGAACTTATCTACAATGTCCCTCGTGCTACACTCACAAGAAGGATCAGATCAGCGAACAATGATCCACCTCCCATTTTTGGACTTCCTAGCTGCATGGGACAGGCGAATGAGCGAAAGTCTGCCACGTACCTGAAAATCATGGCTAAAATGGGATTCCCTCAGGATCGGTTCAGAATTCGTCAACTGGCATTTAAATTCGTAGAGAAGCTAAAAATTGATCATCGATTTAACGAGGAAACCAAGATGGCTGGATATCCTTCGCTTCGTTCTTTCCTTCGTCGAAACCCCGATCTCACTATCCGAAAATCTGAAGGACTATACATGTCAAGAGCTAAAGGATTATCCAGAAAAGCAGCCCAAAACTTCTACGagcttctttag
- Protein Sequence
- MAEAVAKVKSKVMSLREAELIYNVPRATLTRRIRSANNDPPPIFGLPSCMGQANERKSATYLKIMAKMGFPQDRFRIRQLAFKFVEKLKIDHRFNEETKMAGYPSLRSFLRRNPDLTIRKSEGLYMSRAKGLSRKAAQNFYELL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -