Basic Information

Gene Symbol
ct_1
Assembly
GCA_035222095.1
Location
JAWWEA010000123.1:47304878-47307524[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2e-32 1.8e-28 100.6 0.0 2 77 115 191 114 193 0.96
2 2 6.9e-31 1e-26 95.0 0.0 3 75 339 412 337 416 0.95

Sequence Information

Coding Sequence
atgatgaacggAATCTCTGAAGAGGAGAAGGAAAAAATGGAAGAGGCAATGAGGCACGCTGGAAGCGCCTTCTCCTTAGTGAGACCTAAACAGGAACCCACGGGACCCCAGTCAACTCCTGGTGGTTCCAGTGCGAGTTCACCATTAGGCAATTCCATTCTTCCACCTGCGATGACACCTAGCGACGAATTCGCTGGTGCTGCAGCAGCCAGCCCTCTTCAGAGGATGGCTTCAATCACCAATAGTTTGATAAGTCAACCGTCCACTCCAACTCACCACTCAGCTAATCAAAGACCACTGAAAGCTGTTCTTCCACCTATCACTCAACAGCAATTTGATATGTACAACAACCTGAATACCGAAGACATTGTCAAGAGGGTAAAAGAACAACTATCCCAGTATTCAATTTCCCAACGGCTCTTTGGAGAATCCGTATTAGGCTTGTCTCAAGGTTCAGTCTCCGACCTCCTTGCAAGGCCGAAACCTTGGCATATGCTCACCCAAAAGGGACGGGAGCCCTTCATTAGGATGAAGATGTTCTTGGAAGATGACAACGCGGTACACAAGTTGGTCGCCAGTCAGTACAAAATCGCCCCCGAGAAGCTGATGAGGACCGGCGGCTACGGCGGCCTGCCTCCTTGCGGAACACCCATGAAGCCAATGCCACCGACTAAACTAGTTCAGGAGCAGCTCCAGAATGCAGCGAAGGCTCAAGCAGCAGCGCAGGCTGCAGCTCAAGCCGCTGCTCATCATCAGCAGGAGATTCAGATGCAGCTCGGACCACCTGCTCAGAATCCTCATCCTCAAATTCCTCAGCCACCACCACCTATGATGATGACACCAACTGGTCCTCTTCATCCGCACGCTCAGCTCAACATGGAGCTTCAAAAGAAACAACATCAGCAACAGCAGCAAATAAATCTGCACTCTCCCCACCATCAGATGGCTCCCTCACCCTTGAGATCTCTCCATCCGCACATTTCCCCAAGTGTCTACGAAATGGCTGCTCTTACTCAAGACCTCGATACCCAAACGATTACAACGAAAATCAAGGAGGCTCTCCTAGCAAACAATATAGGTCAGAAGATCTTCGGAGAAGCTGTCCTAGGTCTCTCGCAAGGATCAGTCAGTGAACTCCTCAGTAAACCAAAGCCTTGGCACATGCTGAGTATCAAAGGAAGGGAACCTTTTATCAGAATGCAGTTGTGGCTTTCTGATGCACATAATGTAGACAGACTCCAAGCTCTCAAGAACGAACGACGAGAAGCGAACAAGAGAAGGCGCAGTAGTGGACCTGGACATGACAACAGCTCAGATACATCAAGTAACGACACTGCGGAATTCTACCACTCCGCATCTCCTGGACCTGGTCCAGCTTCGGCGAAGAAACAACGAGTTCTCTTTAGTGAAGAGCAAAAGGAGGCTTTAAGGCTCGCTTTTGCGTTAGACCCTTACCCCAATGTCTCGACCATCGAGTTCCTCGCTGGTGAGTTGAGTCTCTCTTCCCGGACGATAACGAACTGGTTCCACAATCATCGGATGAGGTTAAAACAACAGGCTCCACATGGTCAGCCGGAACCCCAGTCGCCGAGAGAACCTGGACAACCCTTCGACGCTGTGCACTTCAGGGTGCTGTTGAATCAAAAGCTCTTGGAGATCCAGAAGGAACGACTCTGTCTGGGTAACGTACCTATGACCTATCCTCCCTACTTCAACCCCAATTTGGCTGCTCTTGTTGGAAATGCTTTAAAGGAACAATGCTCCGGCCTTGATCTTTCAATGGGATCTTTGAAGAGGGAACCGATGCAAGAATTCGAGGACGATGACGGTGATGACGGTATGAGCAATTTAGGAAGCGAAGACTCCGAAGGTTCTGCGGGGAGTATGAAGCGAGAACAAACGGAAACACCTGCCCCCACAACTGGTAGGTCGAGTAGGCGGAAACCTGCAGCTCCTCAGTGGGTGAATCCAGAGTGGCAAGAGCCAGCGAGGGCCGGGGACGAAGTGATCATCAATGGTGTTTGTGTGATGCAGACTGATGATTATGGCGTCAAGAGGGAAAGCGTGGAGACCGTCAGGGTTGAGCCAACTCCTGTTCAGGACAGATTTGAGGAAGACGCCCAGAGTGATGTTTCTTCAGTTTCCGCCAACAATGCACCTGACAGGGATAGTCCGCTTCCGAGTCCAAAATCGGGGCATACTAGTCCCGTAACGTCTCCAAGGCCACCTTCGGTTCAGCAGACGCAACAGTCGACGGAAGAGAGTCCAAAGGAGGTCGTCAAACACGAACCCGAAGAGACGTGGGATTATTAA
Protein Sequence
MMNGISEEEKEKMEEAMRHAGSAFSLVRPKQEPTGPQSTPGGSSASSPLGNSILPPAMTPSDEFAGAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDMYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPPCGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAHHQQEIQMQLGPPAQNPHPQIPQPPPPMMMTPTGPLHPHAQLNMELQKKQHQQQQQINLHSPHHQMAPSPLRSLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHSASPGPGPASAKKQRVLFSEEQKEALRLAFALDPYPNVSTIEFLAGELSLSSRTITNWFHNHRMRLKQQAPHGQPEPQSPREPGQPFDAVHFRVLLNQKLLEIQKERLCLGNVPMTYPPYFNPNLAALVGNALKEQCSGLDLSMGSLKREPMQEFEDDDGDDGMSNLGSEDSEGSAGSMKREQTETPAPTTGRSSRRKPAAPQWVNPEWQEPARAGDEVIINGVCVMQTDDYGVKRESVETVRVEPTPVQDRFEEDAQSDVSSVSANNAPDRDSPLPSPKSGHTSPVTSPRPPSVQQTQQSTEESPKEVVKHEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00089414;
90% Identity
iTF_00089414;
80% Identity
iTF_00089414;