Basic Information

Insect: Andrena trimmerana
Gene Symbol: ECU06_1150
Assembly: GCA_952773225.1
Location: OX731550.1:82847966-82849054[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0018 0.18 12.8 4.1 3 20 31 48 29 50 0.91

2 9 0.0035 0.36 11.9 1.1 1 23 105 128 105 128 0.92

3 9 0.00036 0.036 15.0 1.1 1 23 160 182 160 182 0.98

4 9 4.5e-06 0.00046 21.0 1.5 1 23 188 211 188 211 0.96

5 9 1.2e-06 0.00012 22.8 0.3 1 23 217 239 217 239 0.98

6 9 4.6e-08 4.7e-06 27.3 1.0 1 23 245 267 245 267 0.99

7 9 6.3e-06 0.00064 20.6 0.7 1 23 273 295 273 295 0.98

8 9 1.8e-06 0.00018 22.3 1.4 1 23 301 323 301 323 0.96

9 9 6.1e-06 0.00061 20.6 1.1 2 23 330 352 329 352 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0018	0.18	12.8	4.1	3	20	31	48	29	50	0.91
2	9	0.0035	0.36	11.9	1.1	1	23	105	128	105	128	0.92
3	9	0.00036	0.036	15.0	1.1	1	23	160	182	160	182	0.98
4	9	4.5e-06	0.00046	21.0	1.5	1	23	188	211	188	211	0.96
5	9	1.2e-06	0.00012	22.8	0.3	1	23	217	239	217	239	0.98
6	9	4.6e-08	4.7e-06	27.3	1.0	1	23	245	267	245	267	0.99
7	9	6.3e-06	0.00064	20.6	0.7	1	23	273	295	273	295	0.98
8	9	1.8e-06	0.00018	22.3	1.4	1	23	301	323	301	323	0.96
9	9	6.1e-06	0.00061	20.6	1.1	2	23	330	352	329	352	0.96

Sequence Information

Coding Sequence: ATGATGAGAGCCATACTATCTCCTAAAGAGTGCTCCGATGAAGCTGCATCTTTAGCAAAAGCAAGAGCTAGTTCGCCAAAGAAACACTTGTGCGAGAATTGTCAGCGAACTTTTAAGAGAGAATGCCACTTAATGCGGCACGTGGCCAAATGCAAGGCAAAAGCAAGAGATAGTACCAAGACCATTGACGCGCGCTGTAAAGACGAGGGCATATCGAGAGATTCCGATAAAAGCAAGGAGGAAAGCACAAAGGACGAAGGTAGAAGGAATTGGAGATTGTACCAGAGCTGCAAAAGAAAAAGGCACGAAACGCACCCTTGCATGTACTGCGACTACACGAGCAAGAAGAAGAAGCTGTTGGAGATCCACTTAGCGGAGTCGCATCCAGAATTCACACGTAAGAAAGACAAGAAGCTTCGATGCATCGATAGAGAGCTGGTGATGCGTGCTAAGATGGAGGTGGATGGAAAGGTTTATTACCACTGCGACGAATGTGGCAAGAACCTCTACTCGCCGTACACGTTCTACTGGCACGCGCGGATCCACACCGGAGAACGTCCCTACACTTGCCACTTGTGCGGCAAACAGTTTCGCGTGAACCAGGGCCTGGCGAGGCACTTGAGGGACACTCACGCGGGCATCAAGAATTTCCCCTGCGACATCTGCGGCCGGATGTTCACCACGAAACGGAACGCGGAGGATCACAGGCGGATTCATACCGGCGAGCGGCCCTACGTCTGCAACGTTTGCGGGAAATCGTTTAAGCAGAAAGCCTCTCTGTTCGTGCACAATCGCACGCACTCGGACGTGTTCCCTTTCAAGTGCAACTACTGCGATCAGAGTTTCCGTACGCGGCCGCCTCTGGTCGTTCATATAACGAAGCACACCGGCGAGAAGCCGCACGCGTGCGACATATGCGGCCGTTCGTTCCGCATAAAGTACGAGCTGAAGCGTCACCGTCTGATACACTTCGACGAGAAACCGTGGCAGTGCACCGAGTGCGATCTCTCGTTCCGCCAGAAACGCTACTTAGTTAACCATAAGAGAATTAATCATAACACGAACACACTGGCGACTGCCACCAAGTAA
Protein Sequence: MMRAILSPKECSDEAASLAKARASSPKKHLCENCQRTFKRECHLMRHVAKCKAKARDSTKTIDARCKDEGISRDSDKSKEESTKDEGRRNWRLYQSCKRKRHETHPCMYCDYTSKKKKLLEIHLAESHPEFTRKKDKKLRCIDRELVMRAKMEVDGKVYYHCDECGKNLYSPYTFYWHARIHTGERPYTCHLCGKQFRVNQGLARHLRDTHAGIKNFPCDICGRMFTTKRNAEDHRRIHTGERPYVCNVCGKSFKQKASLFVHNRTHSDVFPFKCNYCDQSFRTRPPLVVHITKHTGEKPHACDICGRSFRIKYELKRHRLIHFDEKPWQCTECDLSFRQKRYLVNHKRINHNTNTLATATK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00762717;
90% Identity: iTF_00084747;
80% Identity: -