Basic Information

Insect: Andrena trimmerana
Gene Symbol: -
Assembly: GCA_952773225.1
Location: OX731550.1:82023824-82027035[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00039 0.04 14.9 0.4 2 23 292 313 291 313 0.95

2 11 0.02 2 9.5 2.9 1 23 321 344 321 344 0.96

3 11 0.00043 0.043 14.8 3.3 1 23 400 422 400 422 0.98

4 11 2.2e-06 0.00022 22.0 1.5 2 23 472 493 471 493 0.97

5 11 3.6e-05 0.0037 18.2 0.7 1 23 498 521 498 521 0.96

6 11 1.7e-05 0.0017 19.2 0.3 1 23 558 580 558 580 0.98

7 11 9.3e-07 9.4e-05 23.2 0.9 1 23 590 612 590 612 0.96

8 11 2.6e-06 0.00027 21.8 1.2 1 23 618 640 618 640 0.99

9 11 1.3e-05 0.0013 19.5 0.2 1 23 646 668 646 668 0.98

10 11 0.0001 0.01 16.8 4.6 1 23 674 696 674 696 0.98

11 11 0.0004 0.04 14.9 0.4 1 21 702 722 702 723 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00039	0.04	14.9	0.4	2	23	292	313	291	313	0.95
2	11	0.02	2	9.5	2.9	1	23	321	344	321	344	0.96
3	11	0.00043	0.043	14.8	3.3	1	23	400	422	400	422	0.98
4	11	2.2e-06	0.00022	22.0	1.5	2	23	472	493	471	493	0.97
5	11	3.6e-05	0.0037	18.2	0.7	1	23	498	521	498	521	0.96
6	11	1.7e-05	0.0017	19.2	0.3	1	23	558	580	558	580	0.98
7	11	9.3e-07	9.4e-05	23.2	0.9	1	23	590	612	590	612	0.96
8	11	2.6e-06	0.00027	21.8	1.2	1	23	618	640	618	640	0.99
9	11	1.3e-05	0.0013	19.5	0.2	1	23	646	668	646	668	0.98
10	11	0.0001	0.01	16.8	4.6	1	23	674	696	674	696	0.98
11	11	0.0004	0.04	14.9	0.4	1	21	702	722	702	723	0.94

Sequence Information

Coding Sequence: ATGGAAGTTTCGAAAAACGACCAGTTGGTTGATACGTATCAGAAAACGTACGGGGACGAATGTCGGATTTGCCTGAAAAGGGCTGTTGAAATTTGTGAGCTATTTCGAAATGGGGACGCTATTGCTCGTAAACTTATGGCCGTTGCTTCTGTACAGGTGGACGAAGGGGACGGTTTACCGCCAGTGATATGTTTGCCTTGTAACCAACGTCTAGACGCATCCTACGATTTTAAATGTCAAATACAGAGTTCGGACGAGAAGCTTCGGCAGCTTCTGAAATTTAAATCGGCTAACGATTCTGTTACCAGTGCCAGTATAGTCACAGCTATAATCGCCGATGTGATATCCAGCGTAATATCCTCCGAGAAGGAGAACAATCAGAAGGATGTAGTTTGCCCGACGAACTTCTGCCCCGACAACTTTTGCTTCACGAAAGATGACGCCTCCTTTTGCCTGAATTCGGATAAAAGCTTGTTCTGTTACGAGAGAGAACCGCAGAGTCAGTTAAGTAACGCCGAGCAGAAAAAGTGTGCGGAGCACGTGAACGTTTATAAGAATCTGTTAGAAGATTCTCAGAGAGAAATCGAGTCGATTAAGCAAGAAGAATTGTTGCTCTTCGACCAGTGTATAGAGAACAATAAAGTAGATTCTATAAGGCAAATTAATTCAATTAAAGACGGATTGAGGGGCGACGACGGACTGGCTTTGTTCCATGAACGTATGGAACAGAAGAAAGACACTTCGTTTAAGGCTGCTGTGAATAACGATGGACTATTGGAAATAGGAAGCCAAGAGATATCTGAAGAACTTTCGAAACCTGATGGCGCGCACGACGACGAAGAGAAGCCTCTTATATCACGCACAACTAGATTACGATGTACACAGTGTATCAAATCATTTCGTACAAAAGTGGCCTTACAGAGGCACGCCATTGTACATAAACGGAAAACTAAATTACGATACGTTTGTTACATCTGCGAGAAACAGTATTCGACTCATGCAAAGGTGAAGGAGCATTTAGCAATGTGTCACGAGACGCATGATAGGAAAGAGAATATCGAACATAAGAGAGTTAGCTACGAGCAGGAAAAAGAAATCGCAAGCGTTCAAGATAAAAGGATCAGTAATGCTCACGAGAGAAGGCAAAAGGCGCAGAGAAACGACGACCCTTCGAAGGAGCAACGGAGAAATCTGAAATTTACCTGCAAAGTCTGCTCGAAGCAATTCACTTATCAGAAGTCTTTTGTGACCCACGCTAAAAGTCATTCGGAGTATAAATCAGAAGAGTTGGACGACAGCAATCGGTGTACAATGAAAGAAAGGCCCGCGGAGAATgtcgaggaagaagaggagaacGAAGAAGAggacgacgacgaggacgacgagGACGAGAACCTCCCGGCCGAAAGCCTGCAGTGCACTCAGTGCGGGAAGCTGTTCGCAACAAAGAGGAATCTGAAGAGGCACGTCTCCACGCACAGTGGATTAAAGTACACCTGTGGTACTTGCGGTAAAGGGTTCTCCAGAGTGGACAAATTAAAGGATCACGAACAATCGAAGCACAAGTCCGAAATGTTTGAGAGCTCCGATCTAGACGATAAAGAAGACACGGACAGTGTAAATAAGGAAGACTGTTTAGAGCGAAGGAAGAAAGAGCGTCACAACAGACCGCACAAGTGCGCGCTATGCCCTAAATCCTTCGCACAGGCTCAGTCTCTGGCGAACCACATAGAGCGTCACAAGCGTGTTAAAGAAACCCAGAAACGGTTTCTTTGCGAGGTTTGCAGCAAGTGTTTCGCACAGAGTGGCTCTCTTGTCGCGCACATGCGTACGCATACGGGGGTGAAACCATATGTCTGTAACGTGTGCAGTAGGGCTTTTACAAAGAGCACTTATTTGCAATTGCACCTACGCACGCACAGCGGGGAAAAGCCTTACATTTGTCAGTATTGTAGTAGAGCGTTCGCGCGTGCGAACACATTGGCACGGCACATAACAATGCACACAGGGGAGGCGAAGTATCATTGCCAGATCTGTACAAAGTCGTTTAGAAGGCTGACTTCGTTGAACGAACACACGTACACGCACACTGGTCAGAGACCGTATGCGTGCAAGATCTGTACAAAGAGATATAATAATGCCGGGTCACTTTATGCACACAGAAAGAAGTGCAAAGCGCAGCAGCTATCAAATGCCGGCTACGCGGTTTCCGTGGAGAACGCCGTGCCGCAGCAGGACGTGAACGTACCGCAAGTCTTGATCTATTCGCAAAGGAAGCTGGTGGAAGATGCGACTGTCGGCCAAGTTACGCCAACGCCGCAGTACATGCTCGCGAATGTGCACAATCAGAAGAGCCTTGGATCAAATGTCATCCAACCGTTCGCGGTGGAAGACCCAAATGTTTATACAATTAATTCGAAGCAATTCAAGAATCCTTACTACACGATTTACCCAAACATGTAA
Protein Sequence: MEVSKNDQLVDTYQKTYGDECRICLKRAVEICELFRNGDAIARKLMAVASVQVDEGDGLPPVICLPCNQRLDASYDFKCQIQSSDEKLRQLLKFKSANDSVTSASIVTAIIADVISSVISSEKENNQKDVVCPTNFCPDNFCFTKDDASFCLNSDKSLFCYEREPQSQLSNAEQKKCAEHVNVYKNLLEDSQREIESIKQEELLLFDQCIENNKVDSIRQINSIKDGLRGDDGLALFHERMEQKKDTSFKAAVNNDGLLEIGSQEISEELSKPDGAHDDEEKPLISRTTRLRCTQCIKSFRTKVALQRHAIVHKRKTKLRYVCYICEKQYSTHAKVKEHLAMCHETHDRKENIEHKRVSYEQEKEIASVQDKRISNAHERRQKAQRNDDPSKEQRRNLKFTCKVCSKQFTYQKSFVTHAKSHSEYKSEELDDSNRCTMKERPAENVEEEEENEEEDDDEDDEDENLPAESLQCTQCGKLFATKRNLKRHVSTHSGLKYTCGTCGKGFSRVDKLKDHEQSKHKSEMFESSDLDDKEDTDSVNKEDCLERRKKERHNRPHKCALCPKSFAQAQSLANHIERHKRVKETQKRFLCEVCSKCFAQSGSLVAHMRTHTGVKPYVCNVCSRAFTKSTYLQLHLRTHSGEKPYICQYCSRAFARANTLARHITMHTGEAKYHCQICTKSFRRLTSLNEHTYTHTGQRPYACKICTKRYNNAGSLYAHRKKCKAQQLSNAGYAVSVENAVPQQDVNVPQVLIYSQRKLVEDATVGQVTPTPQYMLANVHNQKSLGSNVIQPFAVEDPNVYTINSKQFKNPYYTIYPNM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00084737;
90% Identity: iTF_00086569;
80% Identity: -