Basic Information

Gene Symbol
ZNF236
Assembly
GCA_963932275.1
Location
OZ010728.1:64895888-64907997[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 0.00033 0.047 15.2 1.7 2 23 185 206 184 206 0.97
2 26 0.00013 0.019 16.4 1.1 1 23 212 234 212 234 0.98
3 26 9.3e-06 0.0013 20.1 0.3 2 23 240 261 240 261 0.97
4 26 0.014 2.1 10.0 0.2 3 23 269 289 267 289 0.96
5 26 0.0006 0.087 14.3 0.5 2 23 300 321 300 321 0.98
6 26 9.3e-07 0.00014 23.2 1.1 1 23 342 364 342 364 0.99
7 26 5.3e-06 0.00077 20.8 0.6 1 20 370 389 370 392 0.95
8 26 4.7e-05 0.0069 17.8 0.4 1 23 398 421 398 421 0.95
9 26 0.0033 0.48 12.0 2.2 3 23 432 453 430 453 0.97
10 26 2.4e-06 0.00034 21.9 2.1 1 23 581 603 581 603 0.98
11 26 0.00025 0.036 15.6 5.1 1 23 609 631 609 631 0.99
12 26 0.064 9.2 8.0 1.6 1 23 637 659 637 659 0.97
13 26 0.018 2.6 9.7 5.9 1 23 747 769 747 769 0.98
14 26 4e-05 0.0058 18.1 5.6 1 23 775 797 775 797 0.99
15 26 7.6e-05 0.011 17.2 0.7 1 23 803 825 803 825 0.98
16 26 0.00051 0.074 14.6 7.6 1 23 831 853 831 853 0.98
17 26 0.3 43 5.9 1.5 2 23 1255 1276 1254 1276 0.96
18 26 0.0043 0.63 11.7 4.3 1 23 1282 1304 1282 1304 0.98
19 26 0.0028 0.4 12.3 4.3 2 23 1311 1332 1310 1332 0.96
20 26 3e-07 4.3e-05 24.8 1.6 2 23 1418 1439 1417 1439 0.98
21 26 0.00013 0.019 16.4 3.0 1 23 1445 1467 1445 1467 0.99
22 26 0.00031 0.045 15.3 1.9 1 23 1473 1495 1473 1495 0.98
23 26 0.00036 0.052 15.1 2.6 1 23 1501 1523 1501 1523 0.98
24 26 1.2e-05 0.0018 19.7 0.2 2 23 1756 1777 1756 1777 0.97
25 26 1.7e-05 0.0024 19.2 4.5 1 23 1783 1805 1783 1805 0.98
26 26 3e-06 0.00044 21.6 2.7 1 23 1811 1834 1811 1834 0.97

Sequence Information

Coding Sequence
ATGTTGACACGGCACGGTATAATCGCGGAGCCCCCGTGCGTGGAGGCAATGCCGATAAATCTTGTCTCCACCGAAGATGGTCGCACGCTGCTAGCAGTgacggAACACAGAGATGGCGTATTCAAAATTGTCGCAACCCCGGTCACGTATATCGGCCACAGCGTCGAGGCCACGTCGCTGGTGGATGCGAAAGATTCTAGTGGAAATTTATTATTACAGCCTCCTCTTTTCCAAATTAACGTGGAAGACGTCGATGGACCGGCGCTTGAACAGTCGACGCAAAATATGGAAGATGAACGTGATGTTCTTGAACGTTCGAAATCAGCTCCGAACGTGGAAATGAAATGTAAAGTGGCGACTCGTGCGTATCATTCCTTGTACAACAATGATTCGTTGGTCGACGAGAAAGATGGCCAAGTTCGCGAAGAGAAACCTGACGCGTCGAGAAGACGTAGTCCGGGACGACCCAGGAAGTGTACAGGACCTTCTTCGAAAGTAACTGGACAGCTCGTGCACTTAATTATCCGTTGTACGATTGGCAAAGTCTGTTCGAAGTGCGACATCTGCCAGCAAGAATTTACGAAGCAAACGTTGTATCGACGGCACATGGAGAATCACGCGCAGGAGAAACCGCATCGATGCCCGAAATGTTCGGCGTCGTTCAACGTACCGACAAATTTTACCCTCCATATGGCGACGCATAATACGGGTGAGCCGAAATGTCCTGAATGCGGTAGGAAGTTTGCGAGAATGGCTAGCCTGAAGTCTCATATGCTGCTACACGAGAAAGAAGAAAATTTGTTCTGCACGGAATGCGAAGACGCTTTCTCGACTAAAGCTCAATTAGACGTGCATTTGAAACTTCATGGAGAGAAGTGGACAACCGAGGAGGCACGGAAGTGTAAACTTTGCAATAAACAGTTTGGTCAGCCGGCTTTATACAGGCTTCATATTCGTGAACATTACAGGttacagacaaaagtAGCAAAGCAAACGAAAAGAGGGGCAAAGCACAAGACAATGTATAAATGCACGATATGCTTAAAGTCCTTCCAGAAGCCGAGCCAATTGATGCGTCACATTAGGGTGCATACGGGCGAAAAACCTTACAAGTGCACAGTATGCGGCCGTGCATTTACACAGAAGAGTTCTCTGCAGATTCATACGTGGCAACACAATGGTATTCGCCCTCATGCCTGCGGGCTTTGTAACGCCAAGTTCAGTCAGAAAGGTAATTTGAATGCTCATATAATGAGAGTTCACAATATACCAGAGGGCGAGCCTATATATGGATGCAATTATTgttcgtgcgtatttaaaaagCTCGGCAGTTTGAATGGCCACATGAAGCGCATGCACACGGACGTGGACGAGGAAAGTGGCATTGTCAAAGTCACCGGCGGATCCACATCCGACACCATGGAATCGGACATTCGAGCGACCGTGGACAGCGTGATGTCGCAACTGGCGTCTTTAGAATCGAGCACGAGTCAAGTTACGAAAGCACAAAACTACGAATCAAGTATGCCGTCCGGAGCCACCACGAAGAAGGATATCCTCCAGCAGGCGTTGAAAAACAGCGGTCTTCCCAGTAAGAACAGAACTCTCTGCGAAGGTACGTTGGAAACGAAAAAGCTGGCGGCGCGTACCAATTTTGTAACCTTATTGGATCGGACACTCGATGGCGGTACAAGAAAATATTTGACGATAAAGCAACGTTGCGTGGGAAACTTGAGGTGGTATGCGTGTACTTTTTGTcacaaagaatttaaaaaaccgtCAGATTTGATACGACATTTACGCGTTCACACGCAAGAAAAACCATTTAAGTGCACACACTGTCATCGGTCATTTGCTTTGAAATCTACTATGATCGCACACGAACGTACCCACACAGGCACTAAGAAATACGCTTGCGGCTCTTGCGATAGAACTTTTGCGTGCCATGGTAGTTTGATTGCCCATACCAGATTACACGCGAAATCCGAGGAATATTTCGACAAGAAGCCAGTTGGTAATGATGAGAATGCTGCTGGAATTAGCACTTATCCTAATAATCGGGCAAAGACCCACGCAAAGAGCAAGTCGAAGCTATCCCCAGAAGCGGAAAGATTAGTGCCTCAAGTAGTGTTGCAAGAACCGTTGGTCATCAGTGACACCGGGAACAAAATCTGCGTGGCACAGGTACCTTCGAAGGAGAAACGCGCTTTTGATGCGGCAACCGATCCAGCTAGGCCGCACAAGTGTTGGGTCTGTCAAGCGGCGTTTAGAAAGATCAGCCATTTGAAGCAGCATCATCTTCGACACACGGGGGAACGTCCGTACAAGTGCACCAAGTGCGACAGGAGATTCACATCGAAGAGCGTTCTGAAGTCGCATTTACACACGCACGAGGATTCCAgGCCATACAGCTGTTCCATATGTAACGCGAAATTTTCTGCTCAAAGCAGCATGAAAAGACATTTGATTACTCACAGTAACAAAAAGCCATTCATGTGCCCGTATTGTCACAAGACGTTTAAGACATACGTCAATTGCCGAAAGCATATGAAAATCCATAAACAGGAGTTGGCGCAACGGCAATTAGAAGAACAAGAAATTGAAATACAAGAGCGGACTACAGTAAAGCCAAATTCCGAGTCAAGTTCTAAAGAACAAGCGGCTCTTGGATCTTGTTGCCCCTCCTCAGATTTCACTGTCACTAGTACTACCACCGCAACCACAGCTATCGTTACAACATCATCTTCCACACGTCCCGATAGTTTTATACCCTCTCATCTTGGGACGGTTGAAATATCGTTTCAACCACAAATCGGATCAGTTCTCTCTCAAGCTTTCTCCGATCAATTTCACAGTGTAACCGGGGAGAAAGAGAAAGTAAGGCAGCTTGTATCAACTAACTGCGATACATCAACGATCCTTAACCAAAATACTGCGCAAGTTTCAATAACGAATCTTGAAAACCCGCAGATGTTACATGCTGACGAAACTGGCTCAGTTACGTTGCCTATTTATTCTGGCGATCCAGCTCTTACACCGGAGAGCATACGGGAGATCGAAGAAACGTTGAATCAACAGTTGTTTAACATCAGGATGAATCTCAGCCTGGAAAGTAATCATTCGAGGCATTCGAACGGTGGAAGTATGAACGTGCTTGATAATGGAAAAGAGCAGCAGCAACAAACTGTATTGAATGTCATCTACGAGactaacaacaacaacaacagtaaTGGCAACGGTAACAATAACGGTGACAGTGACAACAACATGGTGCCGCCCGAGGAGCATGTATTCACATCGCAGTTAGACTCGTTTGAAATGGATGAAATCGCGTTGCAATCGGGCACTGAAATTGAACTGGATAGTATCGGACTCGACACAAGCAACTCGACGAATATGATAAGCATACTGCCCAGAACTGCGAAAGAGGAGCATCAGCTTTCCGTTTCGGTTAGCCCGCCTACGAACGTGAACGTGAATGATAATCAGCCAGGAAGGTGTGTGCAAACGGTAGTATTTATTTCTGAGGAAAATCTGCCGGGAAAGGGCGATGCAACAAGCGAGTTGGAAATGGAAGGAAGATGCAACACGGATACTGCCCGGGAGGAGTGCACGATCAGTCCGATACTCTTAACAGAAGAGTATCGAGGAACGACGCACGTTTCGAAGGTTCCGTCAAAAGTGCACGCGATGTCGTCGGAGGCCACTTTGGAAACCGTGAAACTTGATACGAGCGAACTGTGTGGAGGAGAATGTTCATTGCAGTGCCACGTGTGTAGCCGACAAGGATTCACAACAACTGGGTTAAAGGAACATTTGAAGATCCATCGTGGGACGAAAGAGTATCGATGTACGAAATGTTCCTCGAGATTTTGTACGAACGGTGGACTGAACAGGCACTCGAAGATACACGTGAATAAACAATTATGCAAGTGCCCGTCGTGTGAGAAATATTTTAGTAGCAGAACGCAGTTGCGTTCGCATAGTAAAATTCACGAGACCTCGACGGCATGGAGCGAGATGCCTCGTTCGATAGCAAGCGATGCCGCGGAAGGTACGGTTTCAGCGCAGGTCCAGATGGCtatgcagcagcagcagcacacTGTTGATTCACCGTTCGCAGATATTGCGATAGATCCGGATTCTACCGTGTCCGAAAAGGTCCTACTAGATACAGTAGCCGAAAAGCAAGTAATGGATCGAGCAAAAGGCGTTTCGATGGAGGAAAAGGAACGGAAGGAGTATACGAACAAGTGCAAATACTGCCCGAAGACGTTTCGCAAACCGAGCGATCTCATAAGACACGAACGTACCCACACGGGGGAGCGACCGTACAGATGTGATTATTGCAGCAAAAGTTTTGCCGTAAAGTGTACGCTGGATTCTCACATGAAAGTGCACACTGGCAAGAAAACGTTCCGTTGCCACGTTTGCAGCAGTTTATTTGCGACGAAGGGTAGCCTGAAGGTCCACATGCGATTACACACAGGTTCGAAGCCGTTCAAATGTCCTATCTGCGATTCGAGATTCCGGACTTCGGGCCACAGAAAGGTACACCTACTGAAGCATACGCGAGAGCATAAAGGTAACAGCCCGAAGAGAAAGCAGAAACATTTAAAAGTCGCGGCCATAGCCCAAGTTGCAGCTGACTTTGACAAGTGTGAGGAAGCTGAAGAGAAGGGGAGCAGTTACGAAGGGGAGGTGCAACAATTGCACCACGAGCAGCTCTCGCAAACGGACGCGAGTTATTCGGATTTGGAGGGAATCGGCGTGGATGCAACCGCTGGCTGTTTGCCGGATCAAATTACCTTCGATATGGACGGTAACATACCGAACAGTAACGCCACGTTGCTCTCTGTAAACGAAGGCAATCAGCTAGTGGCAAACTTGCATTTTCTTCTGGCGAATGGCCTTGTTACTATTCAAACCGAGGAACCGTTATTGTCACAGTCTACGCCAATCGACAATTCGCAGAATCATCGACCAGCAATCGTGTCCGACTCCTCGTACGCGTCAACGCTACATGCCTCTCCCGGCAACAGCAACGATAATGCCAAGGATTCCATGAATCTAGGACAAATGTTAAAAGTACCACAATCGCCGTCCCAATCGTCTCAATCGTATCAATTGCAATCGAATAATTGTCTTTCGGCCGGCGCAGCATCTTCGACTCGGGTGGAACCGTTCCCGAAAGTCCCTCTCCAAGCACCCTTGCCAACGAATGGTGGTAAAAGCACGGTGACCAAAGGCAGCTCGTCCAAGAGAGAGTGCGATATTTGCGGAAAGATATTTACAAAGCCGTACCAAGTCGAGAGACATAAACGTATTCACACGGGCGAAAGACCGTACAAGTGTGATTTATGCACGAAATCGTTTGCTCAAAAGTCAACATTGCAGATGCATCAGAAACATCATACTGGGGATCGACCATATCACTGCCCGTATTGCGAGTACTCCTTCACCCAGAAAGGCAATCTACGAACTCACGTGAAACGCGTTCATCAGCTGGACACCGCTGACGCGAAGAAACTGAAACGCACGTGTGAATCCTTCCTCCCGAAAGTTCTGCAGGACAACTTGACCGAGGTTAAGGCTCTCAATTTGGACGACATATCGTTCGTTGAATTTCTCAAGTAG
Protein Sequence
MLTRHGIIAEPPCVEAMPINLVSTEDGRTLLAVTEHRDGVFKIVATPVTYIGHSVEATSLVDAKDSSGNLLLQPPLFQINVEDVDGPALEQSTQNMEDERDVLERSKSAPNVEMKCKVATRAYHSLYNNDSLVDEKDGQVREEKPDASRRRSPGRPRKCTGPSSKVTGQLVHLIIRCTIGKVCSKCDICQQEFTKQTLYRRHMENHAQEKPHRCPKCSASFNVPTNFTLHMATHNTGEPKCPECGRKFARMASLKSHMLLHEKEENLFCTECEDAFSTKAQLDVHLKLHGEKWTTEEARKCKLCNKQFGQPALYRLHIREHYRLQTKVAKQTKRGAKHKTMYKCTICLKSFQKPSQLMRHIRVHTGEKPYKCTVCGRAFTQKSSLQIHTWQHNGIRPHACGLCNAKFSQKGNLNAHIMRVHNIPEGEPIYGCNYCSCVFKKLGSLNGHMKRMHTDVDEESGIVKVTGGSTSDTMESDIRATVDSVMSQLASLESSTSQVTKAQNYESSMPSGATTKKDILQQALKNSGLPSKNRTLCEGTLETKKLAARTNFVTLLDRTLDGGTRKYLTIKQRCVGNLRWYACTFCHKEFKKPSDLIRHLRVHTQEKPFKCTHCHRSFALKSTMIAHERTHTGTKKYACGSCDRTFACHGSLIAHTRLHAKSEEYFDKKPVGNDENAAGISTYPNNRAKTHAKSKSKLSPEAERLVPQVVLQEPLVISDTGNKICVAQVPSKEKRAFDAATDPARPHKCWVCQAAFRKISHLKQHHLRHTGERPYKCTKCDRRFTSKSVLKSHLHTHEDSRPYSCSICNAKFSAQSSMKRHLITHSNKKPFMCPYCHKTFKTYVNCRKHMKIHKQELAQRQLEEQEIEIQERTTVKPNSESSSKEQAALGSCCPSSDFTVTSTTTATTAIVTTSSSTRPDSFIPSHLGTVEISFQPQIGSVLSQAFSDQFHSVTGEKEKVRQLVSTNCDTSTILNQNTAQVSITNLENPQMLHADETGSVTLPIYSGDPALTPESIREIEETLNQQLFNIRMNLSLESNHSRHSNGGSMNVLDNGKEQQQQTVLNVIYETNNNNNSNGNGNNNGDSDNNMVPPEEHVFTSQLDSFEMDEIALQSGTEIELDSIGLDTSNSTNMISILPRTAKEEHQLSVSVSPPTNVNVNDNQPGRCVQTVVFISEENLPGKGDATSELEMEGRCNTDTAREECTISPILLTEEYRGTTHVSKVPSKVHAMSSEATLETVKLDTSELCGGECSLQCHVCSRQGFTTTGLKEHLKIHRGTKEYRCTKCSSRFCTNGGLNRHSKIHVNKQLCKCPSCEKYFSSRTQLRSHSKIHETSTAWSEMPRSIASDAAEGTVSAQVQMAMQQQQHTVDSPFADIAIDPDSTVSEKVLLDTVAEKQVMDRAKGVSMEEKERKEYTNKCKYCPKTFRKPSDLIRHERTHTGERPYRCDYCSKSFAVKCTLDSHMKVHTGKKTFRCHVCSSLFATKGSLKVHMRLHTGSKPFKCPICDSRFRTSGHRKVHLLKHTREHKGNSPKRKQKHLKVAAIAQVAADFDKCEEAEEKGSSYEGEVQQLHHEQLSQTDASYSDLEGIGVDATAGCLPDQITFDMDGNIPNSNATLLSVNEGNQLVANLHFLLANGLVTIQTEEPLLSQSTPIDNSQNHRPAIVSDSSYASTLHASPGNSNDNAKDSMNLGQMLKVPQSPSQSSQSYQLQSNNCLSAGAASSTRVEPFPKVPLQAPLPTNGGKSTVTKGSSSKRECDICGKIFTKPYQVERHKRIHTGERPYKCDLCTKSFAQKSTLQMHQKHHTGDRPYHCPYCEYSFTQKGNLRTHVKRVHQLDTADAKKLKRTCESFLPKVLQDNLTEVKALNLDDISFVEFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00087359;
90% Identity
iTF_00087359;
80% Identity
-