Apra016482.1
Basic Information
- Insect
- Andrena praecox
- Gene Symbol
- ZFX
- Assembly
- GCA_963932275.1
- Location
- OZ010729.1:13584107-13594907[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 36 0.00033 0.048 15.2 2.6 3 23 47 67 46 67 0.96 2 36 1.3 1.9e+02 3.8 1.6 2 23 94 116 93 116 0.91 3 36 0.13 19 7.0 2.1 1 23 130 153 130 153 0.90 4 36 3e-05 0.0043 18.5 2.0 1 23 159 182 159 182 0.96 5 36 0.0014 0.2 13.2 5.1 3 23 189 210 187 210 0.95 6 36 0.0003 0.044 15.3 0.6 1 23 215 238 215 238 0.97 7 36 6.3e-06 0.00091 20.6 2.2 2 23 245 266 244 266 0.97 8 36 0.00021 0.03 15.8 1.4 1 23 272 294 272 294 0.97 9 36 0.0001 0.015 16.8 0.5 1 23 300 322 300 322 0.97 10 36 0.002 0.29 12.7 0.3 2 23 563 585 562 585 0.91 11 36 0.85 1.2e+02 4.4 0.3 1 23 597 620 597 620 0.95 12 36 0.094 14 7.4 3.5 1 23 633 656 633 656 0.93 13 36 0.00034 0.049 15.1 5.8 1 23 662 684 662 685 0.95 14 36 0.015 2.1 10.0 0.4 3 23 692 713 690 713 0.94 15 36 0.0017 0.24 12.9 1.5 1 23 718 741 718 741 0.98 16 36 7.5e-07 0.00011 23.5 0.4 2 23 748 769 747 769 0.96 17 36 6.3e-06 0.00092 20.6 1.3 1 23 775 797 775 797 0.97 18 36 8.2e-05 0.012 17.1 1.0 1 23 803 825 803 825 0.98 19 36 0.0035 0.51 11.9 2.1 2 23 931 952 930 952 0.97 20 36 0.0019 0.28 12.7 1.2 1 23 954 977 954 977 0.95 21 36 0.0065 0.95 11.1 0.9 1 23 982 1005 982 1005 0.96 22 36 0.00019 0.028 15.9 1.6 1 23 1011 1034 1011 1034 0.95 23 36 0.0027 0.4 12.3 2.0 2 23 1041 1063 1040 1063 0.95 24 36 0.017 2.5 9.8 0.4 1 23 1068 1090 1068 1090 0.96 25 36 0.0016 0.23 13.0 0.5 3 23 1098 1117 1097 1117 0.98 26 36 1.3e-05 0.0019 19.6 0.1 1 23 1123 1145 1123 1145 0.97 27 36 0.0022 0.33 12.5 0.4 1 23 1151 1173 1151 1173 0.97 28 36 0.00019 0.028 15.9 0.7 2 23 1255 1276 1254 1276 0.96 29 36 0.00028 0.04 15.4 1.5 2 23 1279 1301 1278 1301 0.94 30 36 0.28 41 6.0 2.4 1 23 1306 1329 1306 1329 0.97 31 36 0.00016 0.023 16.2 0.7 1 23 1335 1358 1335 1358 0.93 32 36 0.3 44 5.9 0.3 3 23 1366 1387 1364 1387 0.94 33 36 0.002 0.29 12.7 2.0 1 23 1392 1414 1392 1414 0.98 34 36 0.012 1.7 10.3 0.6 3 23 1422 1441 1421 1441 0.82 35 36 2.8e-05 0.0041 18.5 0.1 1 23 1447 1469 1447 1469 0.97 36 36 0.002 0.29 12.7 1.0 1 23 1475 1497 1475 1497 0.97
Sequence Information
- Coding Sequence
- ATGCCAGGCTTCCTTGATCCGTGGCAGGAACCAGCGGGGCCAAACGCATCCTCCGTCACAGAAACATCTTCCGTCCCCAAGAAAACGGAAGAAACCTGGAAGCCATCACCGAAAGAAGAATCTAAACCTCCACCAGCCTGCGACGTCTGTCACAAGCAGTTCAAAAAGAAGTATCTTCTGCGAAGGCACACGGTTGTACACgagaatgaaaataaaaaagtgCCATCCACAGAGGAGCCCGCGTTTATGGAACTACTGTCCCAGAAGCAGGAGGCCTTGTCGTGCATGACCTGCGAGTTCAGCTGCAACAAGAGGTCCACCATGATCGCGCACCTGGCCCAGAACCACGGGGGATCCAGCAAGAGCAAGTTCACCAGCAAAGGAAGGTTCACCTGCATAATCTGCGGCCTGATTTGCTCCCGCAAAGAAACCTTGAAGTCCCACTTTGTACGCAAGCACACGCAACGCTACGAGTTCTCTTGCGAGCACTGCGGCAAGGAGTTCAAGATCAAGGGCGACCTGACGACGCACACGCGGCTTAATCATCGAGAACCGCCCGTGATATGCGACGTATGCGGCAAGACCTGCCGGAATAGCCATAGCTTGTACACCCATCAGAAGCACGCCCACTACAAGGCGAAGTACGAGTGCCCTGTGTGCCACAGGCGGCTGGTCAGCAAGGAGAACTTGGACCAGCACGTGTTGACGCAGCacgagaagaaggagaagtcCGTGTGCGAGGAGTGCGGCAAGACCTTCTTCGAGAATCACGACTTCAGGAAGCACATGAGAATCCACACGGGCGACAAGCCTTACAGCTGCACCGTGTGCGCTAGAGCCTTCACCACCCACAGTAGCTTGAGTCAACATCTTCTTCTGCACACAGGGGAGAGGATTTACGTGTGCGACGTGTGCGGCAAGTCGTTCGCTCAGAAAGCTGGCCTGATATGCCACAGGAAGATACACTCTGGCACGCTACCTCCTCTCCCTGTGATGCACATCGATCACATCTTGAAGGAGTTCACGAAGAAGTATGGGCACGAAAGCCTCAACTCGCGCGGTATCTTTATCTACGACAAGGagccggtgattatgaaaaaATGGCAGATCCTCGAGTTCGACGGGAAGCCCTACTACGCGTTTGTACCTGAAGGCGACACGCCGTTGGCCGAGGAAGACATACCAGAGCACTCGGGCGAGATGATGAACGAAGAGCTGAAACAGGGCCACGTGAAGGAGGAGTGCCTCTACAACGAGGACGAGCTGCAGTATGACTCGTCGGATGAGAGACTGTACGAGGAGGAGCACCTCCTGAACGGTTCCATGGAACAGAGGGAggacgacgaggacgaggacgtgAAACCGATACTCCTGAACGGCTCTCTGGAGGATGAGGCCGACAAGGCGATCGGGGATTTATATCAGGTGAAGGTTCAAGGTAGCATGGTAACCATCGAGAAACTAATGTCCAGGGAGTTGAACCCGAAGGCGGTGGAGTACCAGCAGGACACCGATGAACAGATGCTGTACAACGAAGAGGATCCATTGGACCAGTCGGATGAAGGAGACCAAGATCAAGTGGAGCAGGTGGAGTACTTGGAGGAAGCACTCTTAGAGTCTGCCAACAATCACGTGCGGCCCCCGAAGACGCGCAGAAAGATGTCCAGGAACACCGGGGGCGCTCTGAAGTGCAAGGTCTGCTCGGAGATGTTCAGCTCGGCGATATCGTTCAGGAAGCACGTGGCCTGGACGCACAAGAAGAAGGTGTGCATACAGGAGGACGGCGCGTACATCTGCGCCGTCTGCGACTACAGAACGCTGAAGAAGAGCCTGTTCGCCGCCCATTTGGAGAGAAAGCACGAGACCTGGTCCAGGAAACGGCCCAGCAACATGCTGTTCCCGTGCGCTGCCTGCGGGTTCGTGTGCAGATCGAAGCACTCGCTGCAGTCCCACTTCATAAGGAAGCACACCGACCGGTACGAGCACCAGTGCAAGTTCTGCCCGAAGAAGTTCAAAGTGAAAGGCGACCTGACGAATCACGTGCGGTTTCACCACAAAGAGAAGCCCATCAACTGCGACGTGTGCGGGAAACTGTGCCAGAACAGTGGCTCCCTCTACGTCCACCAGAAGTGGGCCCATTACAAGCCCAAGTACGAGTGTCACATATGCAAGAGGCGCATGGTCACGCAGGAGAATCTTGATCAACACTTGCTGACGCAGCACGAGAAGAGGGAGAAGATAGTGTGCGCGGAATGCGGCAAGACGTTCACCAAGAAGGACTCGTTCAAGAGGCACATGGCCGTTCACACAGGGTGCAAGCCACATTCCTGTCTCATATGCAACAAGCCTTTCGCCAGGCGGTCCCAGCTGCGCCAACACCTGCTCATCCACACTGGCAAGAGGCCATTCGTATGCGACATCTGCGGCAAGGCCTTCACCCAGAAGCCTGGCCTGATCTGCCACAGGAAAACGCACCCCGGCCCGCATCCACCCTTACCCGTCATGCCTATCGCGGACATCGTGAAGGAGTTCACCGAAGGATACGTGCAGGAGATAAACGCGCGCGAGAACGAGGAGAGGATCGAGGAGGAAGCGACTCTGGATCCCCTCAGCGAGGAGTACAAGCCCGGCTCGTGTTTGAGTTCGGCCGCCGAGTACGCCGACTGGGTGGACAAAGAGAGCTTCGAGGTCGCGGGCGAGGAGCAGAACAATGCCGACAATGGGGCGAGATTATCCGACGCGGAGGATCCCGATCGGCAGCCGAAGAAAAGAACGCTAACGACCCGTTTGGAGTGCGACCATTGTCGCCGCAGGTTCTTGAACAAGGGCAATCTCGCGGAGCACTTGAAGAAGCACAGGCACAAGTGCGCGGACTGCCCGAGGACGTTCAGGCTCCGTCGATACTTGGCCTCCCACGTCGACAAGATCCACCGGCGGCAGGTGTACGACTGCAGCGTGTGCGAGTACAAGAGCAACAACAAGGGCACCCTGAAGAACCACTACATACGGCTGCACACCAACAGCTACAATTTCGCCTGCGACATCTGCGGCAAGCAGTTCAAGATCAAGAAGGCCTTGAACCACCACGTGAAGCAGAACCACAGCGACGCGCCGCCGATCGTGTGCGACGTCTGCGGGCACTTCAGCAAGAACCTTCACGCGCTCAAGGCCCACATGAAGTACAGGCACTACAAGCCCGAGTTCATCTGCCGGATCTGTCGCCGAGGCATGACCACCAAGGAGAACCTGGAGCAACACCTCACGTGGCACGAGACCAGGGAGAAGGTGCTGTGCCCGACCTGCGGCAAGAGGTTCCGAGGCCGCGACCTCGATTCCCACATGAGAGTGCACACCGGGGTCAAGCCTTTCCCGTGCCCCGTCTGCGGAAAGTCGTTCAGGAGGCAGACAGCTCAGGAGCAACACGTTCTGATCCACACTGGCAAGAGACCGTACATCTGCGACATATGTGGGCAGGCGTTCGCCCAGAAACCGGGGCTGATTTGCCACAGGAAGCGCCATCCTGGACCGCTTCCACCCCTACCTGTTGTGTCCATCAAGAACATCGTCACGGAGTTCACTAAGGATTCGCCACTGCTGGATCCGCTGCGCGACACGGACGCCCCTGGCGAGCCTTGGAAGATCAGACTACCCCCGTACCCACTGGCGAAGGAAGGAAGATTGCCGAAAAGCTGCGTAAGGGTCGCAATAAAACGAACGCGTCGGAGAGACCCGAAACCAAAAAAGTATCCAGACCCTCGGCTAGAATGCGATCAGTGTGGCAAAAAGTTCCATCGAAAGCCGGCCTTGGTGTCCCACATACTGCAACACAGGCAACCCTGCGACTCTTGCGACCAGAGCTTCAAAACGAGAAAAGATCTGAAGCAGCACTACCAGCAGAACCACGGGCCATTCCTCTATCCCTGTGACCTGTGCGATCACAAGAACAAGCATCTCTCGGGGTTGAAGGATCACATAATTCGCAAGCACACTGGCAGCTACATCTACCCCTGCGAGATCTGCGGTAAGCAGTTCAAGCTGAGGAACGACCTGAAGCAGCACAACAACCAGATGCACAATAATCAACCACCCGTGATCTGCGCTGTCTGTGGCCACCCCAACAAGAGCGTGACCGCCCTCAAGGCCCATATGAGGAACAAGCACACCGAGCCGAAGTTCACCTGCATGATCTGCAAGAAGGGCATTACCACTCACAGGAACTTGGAGCAGCACTTGAAGTGGCACGAGAGCAGCGAGAAGACGCTCTGCCCCACCTGTGGGAAAACGTTTCGTAGGCGTGACATCAGCTCTCACACGTTGGTGCACACTGGGGCGAAGCCATATCCTTGCCCTGTATGCGGGAAGATGTTCAGAAGGCAAACTGCTAAGGAGCAGCACGTTCTTATTCACACTGGGAAAAGACCGTATGTTTGCGACGTGTGTGGACAGGAGTTCACGCAGAAACCGGGGCTGATTTGCCACAGGAAGCGACATCCTGGACCACTGCCACCCTTGCCAGCCGTGTCCATCAAGAACATCATCAATGATTTCGTTCGTGACTACATTATGAAGAATAAGAATGTTGGAATCCAATAA
- Protein Sequence
- MPGFLDPWQEPAGPNASSVTETSSVPKKTEETWKPSPKEESKPPPACDVCHKQFKKKYLLRRHTVVHENENKKVPSTEEPAFMELLSQKQEALSCMTCEFSCNKRSTMIAHLAQNHGGSSKSKFTSKGRFTCIICGLICSRKETLKSHFVRKHTQRYEFSCEHCGKEFKIKGDLTTHTRLNHREPPVICDVCGKTCRNSHSLYTHQKHAHYKAKYECPVCHRRLVSKENLDQHVLTQHEKKEKSVCEECGKTFFENHDFRKHMRIHTGDKPYSCTVCARAFTTHSSLSQHLLLHTGERIYVCDVCGKSFAQKAGLICHRKIHSGTLPPLPVMHIDHILKEFTKKYGHESLNSRGIFIYDKEPVIMKKWQILEFDGKPYYAFVPEGDTPLAEEDIPEHSGEMMNEELKQGHVKEECLYNEDELQYDSSDERLYEEEHLLNGSMEQREDDEDEDVKPILLNGSLEDEADKAIGDLYQVKVQGSMVTIEKLMSRELNPKAVEYQQDTDEQMLYNEEDPLDQSDEGDQDQVEQVEYLEEALLESANNHVRPPKTRRKMSRNTGGALKCKVCSEMFSSAISFRKHVAWTHKKKVCIQEDGAYICAVCDYRTLKKSLFAAHLERKHETWSRKRPSNMLFPCAACGFVCRSKHSLQSHFIRKHTDRYEHQCKFCPKKFKVKGDLTNHVRFHHKEKPINCDVCGKLCQNSGSLYVHQKWAHYKPKYECHICKRRMVTQENLDQHLLTQHEKREKIVCAECGKTFTKKDSFKRHMAVHTGCKPHSCLICNKPFARRSQLRQHLLIHTGKRPFVCDICGKAFTQKPGLICHRKTHPGPHPPLPVMPIADIVKEFTEGYVQEINARENEERIEEEATLDPLSEEYKPGSCLSSAAEYADWVDKESFEVAGEEQNNADNGARLSDAEDPDRQPKKRTLTTRLECDHCRRRFLNKGNLAEHLKKHRHKCADCPRTFRLRRYLASHVDKIHRRQVYDCSVCEYKSNNKGTLKNHYIRLHTNSYNFACDICGKQFKIKKALNHHVKQNHSDAPPIVCDVCGHFSKNLHALKAHMKYRHYKPEFICRICRRGMTTKENLEQHLTWHETREKVLCPTCGKRFRGRDLDSHMRVHTGVKPFPCPVCGKSFRRQTAQEQHVLIHTGKRPYICDICGQAFAQKPGLICHRKRHPGPLPPLPVVSIKNIVTEFTKDSPLLDPLRDTDAPGEPWKIRLPPYPLAKEGRLPKSCVRVAIKRTRRRDPKPKKYPDPRLECDQCGKKFHRKPALVSHILQHRQPCDSCDQSFKTRKDLKQHYQQNHGPFLYPCDLCDHKNKHLSGLKDHIIRKHTGSYIYPCEICGKQFKLRNDLKQHNNQMHNNQPPVICAVCGHPNKSVTALKAHMRNKHTEPKFTCMICKKGITTHRNLEQHLKWHESSEKTLCPTCGKTFRRRDISSHTLVHTGAKPYPCPVCGKMFRRQTAKEQHVLIHTGKRPYVCDVCGQEFTQKPGLICHRKRHPGPLPPLPAVSIKNIINDFVRDYIMKNKNVGIQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -