Basic Information

Gene Symbol
KDM5A
Assembly
GCA_963932275.1
Location
OZ010730.1:6503727-6514142[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.2e-25 8.5e-22 78.4 0.0 2 89 109 192 108 192 0.94
2 2 4 1.5e+04 -2.5 0.1 49 81 820 850 817 855 0.65

Sequence Information

Coding Sequence
ATGGTATCGAGGCACGACACGGACTTCGGTTGCGAGGACTTTTTCGGGACTTATCGTTGCACCCAAGACATGGCTTGCGACCGTGGCGATACGGACTTCGAGTTTATTATACCGCCAGAGGCGCCGGTCTTCGAACCGAGCACGGAGGAGTTTCACGACCCCCTTGGCTACATCGCAAAGATACGGCCGATCGCGGAGAAGTCTGGCATTTGTAAGATCAAACCGCCGCCAAATTGGCAGCCACCGTTCGCCGTTGACGTTGATAAATTCAAATTCGTTCCGAGGATACAAAGATTAAACGAGCTGGAGGCGAAAACAAGGATAAAGCTGAATTTCTTAGATCAGATAGCAAAATTCTGGGAGCTCCAAGGTTCCTCTTTGAAAATCCCGCTCGTAGAGCGCAAGGCCCTCGATCTGTATTCTCTGCACAAAATAGTCACCGACGAAGGTGGAATCGAAACCGTGACCAGAGACAGGAGATGGGCGAAGATTGCGAATAAATTGGGTTACCCGTCTGGACGTAGTGTAGGAAGTATACTGAAGAATCATTACGAAAGAATTTTATATCCATTTGACGTCTTTAAACAAGGGAAAACACTGACAGATATTAAAATTGAACCAGATTCTAACGTGACCGAGAAGAAGGATAGAGATTATAAGCCGCACGGAATCATATCGCGGCAACAAATCAAACCACCGACCGAGAAGTTCTCGCGACGGTCCAAGAGATTCAGCGGCCAGGAAGAGAAGCAGGAAGTATCTATTAAGCAGGAAGACTGCAAGGAGGAGTGCGACTCCGACAACGACTGTAAAGATGGGCTGAAATGCAAGGATAGCGACGACAGTAAAGAGCTCAAGAAGTTACAGTTCTACGGAGCTGGCCCCAAAATGGCTGGATTCAATACCAAAGAAGCAAAGAAATCGAATAAAACGAGGGGCTTGAAGCTTGTTTATGAATTTGATCCCTTGGCGAAATACATTTGCCACAATTGCGGAAGAGGGGACAACGAAGAGAACATGCTTCTGTGCGACGGATGCGACGATAGTTACCACACTTTCTGCCTTATGCCACCATTGACAGAAATACCGAAAGGCGACTGGCGATGTCCGAAATGCGTCGCCGAGGAGGTTTCTAAGCCGATGGAAGCATTCGGGTTCGAGCAGGCACAAAGAGAGTACACTCTCCAGCAATTCGGAGAGATGGCCGATCAGTTCAAGAGCGATTACTTCAACATGCCTGTACACATGGTGCCAACGTCCTTGGTAGAGAAAGAGTTCTGGCGAATAGTCTCTTCCATCGACGAAGACGTGACAGTGGAGTATGGCGCGGATTTACACACGATGGATCATGGATCTGGATTCCCGACGAAAACCAGCGTTAACCTATTCACATGCGACCAGGAATATGCCGAATCTTCGTGGAATTTAAACAATCTGCCGGTTTTACGCGGAAGTGTCCTAGGTCATATTAATGCTGACATCAGTGGCATGAAAGTGCCGTGGATGTACGTCGGCATGTGTTTCGCAACGTTCTGCTGGCACAACGAGGACCACTGGAGTTATTCGATCAATTATCTGCACTGGGGAGAACCGAAAACATGGTACGGCGTACCAGGCTCTCAGGCCGAACGATTCGAGCATTCAATGAAATCTGCCGCCCCAGAACTGTTTCACAGCCAGCCAGATTTGCTCCACCAGTTGGTTACTATCATGAATCCCAACATTTTAACTAGCGAAGGTGTGCCAGTATGTAGAAccgatcagcacgcgggcgagTTTGTTGTGACATTTCCACGAGCTTACCATGCCGGTTTCAATCAAGGATACAATTTTGCCGAAGCTGTGAACTTCGCGCCCGCCGATTGGCTTAAAATTGGACGGGACTGTATAACGCATTACTCGAATTTAAGACGATTCTGTGTATTCTCTCACGACGAGCTGGTGTGTAAAATGTCGTTAGATCCAGATTCCTTGGATATAGGGATCGCCACTGCCACTTACCACGATATGCTCCAGATGGTGGATGATGAGAAGAAACTTCGGAAAAACTTGTTGGAATGGGGTGTAACAGAGGCCGAACGCGAAGCGTTTGAACTTTTACCGGACGATGAGAGGCAGTGCGAGGCGTGCAAAACGACGTGTTTCTTAAGCGCAGTTACATGCTCATGCCAGAGTTCGCAGTTAGTTTGTTTGAGACATTTCACAGAGCTTTGTGATTGTCCCCCGGAAAAGCATACGTTACGTTACCGCTATACCTTAGACGAGTTACCAATTATGTTacaaaagttgaagttgaaagCGGAGTCGTTCGACTCGTGGGTGGCGAAAGTGAAAGAGGCGATGGACCCGGACAAGAAGAGCGATAAGATCGAGCTAACGGAATTGAAGGAGCTCTTGAACGAGGCGGAAAGTAAGAAGTTCCCTGAAAGCGAACTGTTAACAGCTTTAACCACCGCCGTACAAGACGCTGAAAAGTGTGCGAGCGTCGCCCAGCAACTTCTGAATAACAAACAGCGCACCAGAACCAGACAATCGGTCGAAACCAAATATAAGCTTACCGTAGAAGAGCTAACACTTTTCTATAAAGAAATTACGAACTTGTGCTGTGAACTCAAGGAGTCGGATGGCGTGAAATTTATACTCGATCAAGTATTACAGTTTCAAAAGGAAGCGGCGGAACTGGAGGCTACAGAGGATAATTGTGATATAGAGCAGTTGGAGAAGTGTATCGACTTTGGAGATTCTATTTGTATCGAATTACCTCAACTCATTCGTTTGAAGCAAAAATTAGCTCAAATACAGTGGCTGGAGGAAGTGAAGTCCATTCAAGAGGATCCGAAATCTATACACCGCGATGACTTAGCGAAACTAATTGAAAAGGGTATGACAATACCGCCTCACGTAACCGTAGAAAATACTCTTTCCGAGTTGCAAGCATTGATGGTTGCGATTGACAAGTGGGAGGAGAAAGCGAAATTATATCTCCACACGAAGAGCAGGCAAACTATATCGTCGTTGGAAGAATTTATTCGCGAGGCCGACGAAGTGGAAGCTTATTTACCGAGTCTAGATGTTCTCCAAGATACGCTGAACAAGGCGAAGAATTGGACGAAAATGGTGGAGGAAGTGCAGGCAAGGGAGAATTTTCCCTATTACGACACATTGGACGATCTGATAAAAAAGGGCAGAAGTATCCCGCTGCACTTGGACGCTCTTCCAATTTTAGAGTCCACTCTATCGCAAGCGAAGGCTTGGAAAGAAAGGACAGCAAGAACATTCCTGAGGAAAAATTCGCATTATACTTTAATGGAGGCTTTGTCACCGCGGATCGGAGTCGGTATACAAGCGCTGAAAGCTAAAAAGAGCAAGAGTGAAGAATCAGTAGGGCCTGTCTTCGTCTGTGATACAAAATTGGACGATTCCAATGACTCGGCTACGGTCGTAGCCGCGTTTAAATTAGCCGAGCAACGCGAAATGGAAGCTATGAGAAATTTGAGAGAGAGGAACTTAATGAAGACCGAGGTCGACGATTCGAGGTATTGCGTCTGCCGTCGGCCGAGGTTCGGGCTCATGCTTCAATGCGAGCTCTGTAAAGATTGGTTCCACTCGAACTGCGTACCGTTGCCGAAAACGTCGTACAAAGGGAAATTACCGATGTCGAGGGAAATCAAGTTTTTGTGCCCCTGTTGTTTACGTTCACGACGGCCACGGTTAGAAACCATTTTGGCGCTTTTAGTCAGTCTTCAAAAGATTCCTATTCGTTTACCGGAGGGCGAGGCGTTGCAGTGTTTAACAGAACGCGCGATGAACTGGCAGGATCGAGCCCGACAGGCATTAGCTACAGATGAAATTTCGTCGGCGTTAGCAAAATTGTCTGTACTCTCGCAGAAACTGGTAGAGGCGGCTGCGAGGGAAAAGACGGAAAAGATCATTAGTAGCGAGTTAAAAAAGGCGGCGAACAACCCTGAACTGCATCAGAGAGTACAAGCAATTGCCCCACTTAGCGGCGTGCACTCGGATGACAGTGCACTTAGTACTGCAgacgacgacgacgatgttGTTACTATAGACGACGACGAGCCAAGTTGCAGTACATTCAACAGTAATGAGCACGCATACTCTTATATATCTAAAGTTCAGCGTAAGTCACAATCAAGCGATTCAACCGAGGCTGCAGTTATACTTTCGCAATCGGCGAGGTTACGGTTAGAAGAGTTGATGATGGAAGGTGATTTGCTGGAAGTCGCGTTGGACGAGACGCAGCACATCTGGCGCATATTAAGTCACACGAACAGTCCGAGCACTGTTCGTAAATACGCGTCGTACGAGGAAGTACAATCCAGTTCGAACCAGGACACGAAGGATGTGAAGAAGCGTGGGAGGAAACGGAAGTCGGAGGAGTTCGAATTACTGAAGAAGCTCGGGCGACAGAAGATGGAGGAGAAGCATTTGGCGAAGCGCAAAGGACTGCAGAAAGAGAAGAAGTCTGCCAGTTCCCCGGTGCCGATGAAGCGTGGACCCCGAAAGATGAAACGTAAGGAAGGCGAGGAAGGGCCCAAGAAGAGGGGCGGCAATCGGAAGAAGACCAAGCAGGACACTTCGGACGAAGAAGACGATTGTGCCGCCGTTAATTGTTTACGACCCAACGGAAGGGAAGTTGATTGGGTTCAGTGCGATGGCGGCTGTGAAGGTTGGTTCCACATGCACTGCGTCGGATTGGACCGCACAGAAATTGCAGAGGAAGACGATTACATCTGCAGTAATTGCAAAGAGGCAGAGCAAAATTCGACGTCAAGAGCGCCAGATCCGCTAGCCGAATCATTAGGCCTGGATGCACTTCTTTCCCTTTCTCAATCCCAGGGATACCAGGGCACAGACAGCGATGCAGACATTCAGGAAACGACATCCTTCGTCAGGACCTACTAG
Protein Sequence
MVSRHDTDFGCEDFFGTYRCTQDMACDRGDTDFEFIIPPEAPVFEPSTEEFHDPLGYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHKIVTDEGGIETVTRDRRWAKIANKLGYPSGRSVGSILKNHYERILYPFDVFKQGKTLTDIKIEPDSNVTEKKDRDYKPHGIISRQQIKPPTEKFSRRSKRFSGQEEKQEVSIKQEDCKEECDSDNDCKDGLKCKDSDDSKELKKLQFYGAGPKMAGFNTKEAKKSNKTRGLKLVYEFDPLAKYICHNCGRGDNEENMLLCDGCDDSYHTFCLMPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLRGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSQAERFEHSMKSAAPELFHSQPDLLHQLVTIMNPNILTSEGVPVCRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKIGRDCITHYSNLRRFCVFSHDELVCKMSLDPDSLDIGIATATYHDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCQSSQLVCLRHFTELCDCPPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWVAKVKEAMDPDKKSDKIELTELKELLNEAESKKFPESELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQSVETKYKLTVEELTLFYKEITNLCCELKESDGVKFILDQVLQFQKEAAELEATEDNCDIEQLEKCIDFGDSICIELPQLIRLKQKLAQIQWLEEVKSIQEDPKSIHRDDLAKLIEKGMTIPPHVTVENTLSELQALMVAIDKWEEKAKLYLHTKSRQTISSLEEFIREADEVEAYLPSLDVLQDTLNKAKNWTKMVEEVQARENFPYYDTLDDLIKKGRSIPLHLDALPILESTLSQAKAWKERTARTFLRKNSHYTLMEALSPRIGVGIQALKAKKSKSEESVGPVFVCDTKLDDSNDSATVVAAFKLAEQREMEAMRNLRERNLMKTEVDDSRYCVCRRPRFGLMLQCELCKDWFHSNCVPLPKTSYKGKLPMSREIKFLCPCCLRSRRPRLETILALLVSLQKIPIRLPEGEALQCLTERAMNWQDRARQALATDEISSALAKLSVLSQKLVEAAAREKTEKIISSELKKAANNPELHQRVQAIAPLSGVHSDDSALSTADDDDDVVTIDDDEPSCSTFNSNEHAYSYISKVQRKSQSSDSTEAAVILSQSARLRLEELMMEGDLLEVALDETQHIWRILSHTNSPSTVRKYASYEEVQSSSNQDTKDVKKRGRKRKSEEFELLKKLGRQKMEEKHLAKRKGLQKEKKSASSPVPMKRGPRKMKRKEGEEGPKKRGGNRKKTKQDTSDEEDDCAAVNCLRPNGREVDWVQCDGGCEGWFHMHCVGLDRTEIAEEDDYICSNCKEAEQNSTSRAPDPLAESLGLDALLSLSQSQGYQGTDSDADIQETTSFVRTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00873598;
90% Identity
iTF_00141055;
80% Identity
-