Amar017031.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Andrena marginata
Gene Symbol
nfxl1
Assembly
GCA_963932335.1
Location
OZ010664.1:4576959-4580363[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 1.1 1.2e+04 -3.2 1.1 15 19 126 130 125 130 0.81
2 20 0.44 4.8e+03 -2.0 0.9 4 10 161 167 161 167 0.91
3 20 5.5e-08 0.00061 20.0 15.1 1 18 175 191 175 192 0.98
4 20 1.6e-06 0.017 15.4 13.7 1 19 229 246 229 246 0.95
5 20 0.00013 1.4 9.3 11.2 1 19 281 300 281 300 0.92
6 20 0.00031 3.3 8.1 9.6 1 18 336 353 336 354 0.97
7 20 0.67 7.3e+03 -2.6 0.3 1 4 363 366 363 367 0.88
8 20 0.0068 75 3.8 7.6 1 12 388 399 388 399 0.94
9 20 0.46 5.1e+03 -2.1 1.0 6 10 409 413 408 413 0.92
10 20 4.9e-07 0.0054 17.0 14.8 1 18 419 436 419 437 0.93
11 20 1.1 1.2e+04 -3.3 0.7 6 10 466 470 465 470 0.85
12 20 0.0001 1.1 9.6 9.8 9 19 485 495 483 495 0.90
13 20 0.0064 71 3.9 6.3 1 12 505 515 505 515 0.95
14 20 0.85 9.4e+03 -2.9 5.8 14 18 547 551 547 552 0.89
15 20 0.0001 1.1 9.6 6.5 1 12 588 599 578 599 0.91
16 20 0.57 6.2e+03 -2.4 1.4 6 10 616 620 615 620 0.88
17 20 0.0055 60 4.1 14.6 4 19 630 645 628 645 0.91
18 20 2 2.2e+04 -6.5 3.4 9 13 651 655 651 655 0.71
19 20 8.6e-06 0.094 13.0 11.3 1 16 690 704 690 710 0.88
20 20 0.72 7.9e+03 -2.7 0.4 5 10 739 744 739 744 0.92

Sequence Information

Coding Sequence
ATGCAGAAGTTTAGACGAATTCAGGCACAAAATAAAGTAGCGATTAATAAGCATTTAGAAGCGAATGCCTATTTAGAATCGTCTAGCGAAGATGAGGATGACATAAATGAGGAGGATATTCAGAATGCGGTTGGCAAAGTCCTATCCGCTTATCAAGGAAGGGAGGTGGACGCAGAAAAGATTTTGTCctatttaattaatatcttTCAGTCCGGAAGCGCCGTCTGTTTAATATGCATCTCGACTGTGAAGAGGGCAGATCCGATATGGAACTGTAGTAAATGTTTTGCTTTCTTACACTTATCCTGCATTTTGCATTGGATTCAAGATAGTTTAAGTATTAAACGCGAGAGAGGCATTGAACCAGTCTGGGCATGCCCGAAATGTCGTATGGAATACGGGCAGGCGCAAGTTCCTCGTAAATACACTTGTTTCTGTACCAAAGTTACGGATCCTTCTTACCAGCCATGGAATATTCCACACTCTTGCGGGAACACTTGCGGCAAACCATTGCAGCCAGAGTGCGGGCACAAATGCGTTTTACTTTGCCACCCAGGCCCGTGCCCTCCATGCGCCCGAACAATCTCGATCAAGTGTTACTGCGGCAAGCAAATGCCTCAGCAGCGGCGATGCAACGCTAAACACTGGAGCTGCGGCACCGCGTGCAACAAGAAATACCAATCGTGCTCTCACACCTGTAAGCAAATCTGCCACGCCGAAGATTGTCCTCCTTGTCCGGAGATATTGTTGCTGGATTGTCACTGTAAGATTAACAAGGAACCGAAGCCATGCTCCGAGGGCGTGTGGATTTGCGACAATCCTTGTCGCAGGCCGCTATCCTGTAACGTCCATGTCTGCCAAAGCACATGCCATTTACCCGGCGACTGCGGATTATGCCCGATGGAAAAGAACAGAACGTGCCCTTGCGGGAAAAAGCGTTACGCTATCTCTTGCAAGCAGGAGCAGCTGCCGACGTGCGGCGACACGTGCGGCAAGCTACTGGATTGCGGCTCTCACCTCTGCAACATGAGATGCCACACAGATCGATGCGGGCAATGCTTGGAAGTGGTGAACAAGTCGTGCCGGTGCGGCAGCCACGAGAAAGAAATCGCGTGCGGCAAAGACTTTCATTGCAGCAGAAAGTGCACGCAGATGCGCCTCTGCGGCCGGCATTTGTGTAACAAAAAGTGTTGCGATTGCCTGATCAAGAATAcgtacaacgcgtgcgagaagGTATGCGAGAACACGTTGAGCTGCCATAAACACAAGTGTGCCGCTCCCTGCCATAGCGGCCCGTGCTATCCGTGCGCCCGCACCGACGTTATCCAGTGCAGGTGCGGGCACAACAAGATAACGGTGCCGTGCGGCACGAGAAAGAGGATTAAACCACCGGCCTGTAACAAGCCCTGTAAAGTCCCGCCAATCTGCCACCACCCTAAAAGGGAGACTCACAAATGCCATCAAGGACCGTGCCCGCCTTGTAAGAAAATCTGCGACTTAGTGTACAAACGATGCGGTCATTCTTGCGTCGTCGTTTGTCACACGAAAGTGTGGCTGAAGGTGAGCAAGAACGACGTGAAAACGCCAATTACAGGGCCGTGGGATATACAGAAAGAGACTATGCAGCTGAAGACGTTACCCTGTCCACCGTGCGAGGTGTCGGTACCCGTTACATGCTTGGGAGGCCACGAGACGCGTCCGTGGCCTTGTCACATGGCCAGGCCCACTTCCTGTGGAAGACCCTGCGGACGAATGTTACCCTGCACGAACCACACTTGCGAATTAGTGTGCCACAAAGTAACGGGCGCCCCCGCAGATGGCAAAGCTGGTGCTCTGTGCATGGAATGCGAGAGACCATGTTCGTTCCCACGGCCGCAAGGTTGCACGCACTTGTGCCCGAAAGCGTGCCACCCGGCGCCGTGTAGTCCTTGTAAGCAACTAGTTAAGATCCCATGCCACTGCGGTATAGTCACGTTGTATCGAAGATGCGCCGAACTGACCACCGCTACggtcgagaaacgcaacgcatTGCTCAAGTGTGGAAACCAGTGTCCGAGAAATTATATCTGCGGACACCGGTGCATGAACGACTGCCACCCAGGCCCGTGCAAGAACGAGAACGAATGCAACAAAAAAGTGAAACTATTCTGCTCGTGCAAACGTATTAAGAGAGACTTCGTATGCTCGGCGATGCAGAAGCAACAGCCTCAGATCAAATGCGACGATGTGTGTAAGCAATTGAAGAACGAGAAGAGCCAAGCAGAAGCCGCTCTGTTTGAGCAAAAGCGACAGGCGGAGAAGATACGGAACCAAGAAGAGATCGAGAAGTTCGAACGGAAGTTCAAACCCCGCCGCAAAGGAAAGGACAAATTCGATAGGAAACACTCGCAACAAGAAGCTAACAATAATTATTGGAAATATTGCATTCTAGCGATTTTAATATGTATAGTAGGCATAATAGTATTTTATGTGGGCGTTTAG
Protein Sequence
MQKFRRIQAQNKVAINKHLEANAYLESSSEDEDDINEEDIQNAVGKVLSAYQGREVDAEKILSYLINIFQSGSAVCLICISTVKRADPIWNCSKCFAFLHLSCILHWIQDSLSIKRERGIEPVWACPKCRMEYGQAQVPRKYTCFCTKVTDPSYQPWNIPHSCGNTCGKPLQPECGHKCVLLCHPGPCPPCARTISIKCYCGKQMPQQRRCNAKHWSCGTACNKKYQSCSHTCKQICHAEDCPPCPEILLLDCHCKINKEPKPCSEGVWICDNPCRRPLSCNVHVCQSTCHLPGDCGLCPMEKNRTCPCGKKRYAISCKQEQLPTCGDTCGKLLDCGSHLCNMRCHTDRCGQCLEVVNKSCRCGSHEKEIACGKDFHCSRKCTQMRLCGRHLCNKKCCDCLIKNTYNACEKVCENTLSCHKHKCAAPCHSGPCYPCARTDVIQCRCGHNKITVPCGTRKRIKPPACNKPCKVPPICHHPKRETHKCHQGPCPPCKKICDLVYKRCGHSCVVVCHTKVWLKVSKNDVKTPITGPWDIQKETMQLKTLPCPPCEVSVPVTCLGGHETRPWPCHMARPTSCGRPCGRMLPCTNHTCELVCHKVTGAPADGKAGALCMECERPCSFPRPQGCTHLCPKACHPAPCSPCKQLVKIPCHCGIVTLYRRCAELTTATVEKRNALLKCGNQCPRNYICGHRCMNDCHPGPCKNENECNKKVKLFCSCKRIKRDFVCSAMQKQQPQIKCDDVCKQLKNEKSQAEAALFEQKRQAEKIRNQEEIEKFERKFKPRRKGKDKFDRKHSQQEANNNYWKYCILAILICIVGIIVFYVGV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00865697;
90% Identity
iTF_00085854;
80% Identity
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