Amar001009.1
Basic Information
- Insect
- Andrena marginata
- Gene Symbol
- Mblk-1
- Assembly
- GCA_963932335.1
- Location
- OZ010659.1:9313495-9324474[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-17 1e-14 54.2 0.1 1 45 544 589 544 589 0.96 2 2 8.3e-18 3.1e-15 55.9 0.0 1 43 996 1039 996 1041 0.94
Sequence Information
- Coding Sequence
- ATGGGCCGTAGGAGATGGAAGCAATATCAGGACAACCTGTACAAGGGTACTGGCAGCAGCGAATCTGTGACGGCACAGCCCCACCACCGGCTATACCCGGCGTTCTCGCCGTCCTGCGACCAAGTGTCCGGGAATTTGGAACAAATCGGGCCGCGTACGCTTCATCCTCCGTCATCCTCGTTACccgcgacgataacgacgacaACGGCCACCGCATCAACGGCAGCAACGACGACCACGGCGGCAAcaacggcgacgacggcgggcCTGGTCAAGCAGGACAGCCTGCAAAGGCATCCGTTGCAAAATCGCCACCACCATCAGTCCTCGGCCCAAGATCTCCACCGTCACTgtcagcagcagcaacagcagcaggaaGAGCCGCGTCGTCTGAGGCCGGACGAGGTAAAAGTCGAGGTTGCCGAGGACGAGTACGCGAACGGCGTTGCTCGAGAGGGATCGCCGGGGAAAACGACGGACAcgtcgacggcgacggcgacgacggtgACGACGGGACCGAGTATCGctaccatcaccaccaccaccagcaccGCAACCGGCACGATAGCGACGAGCATCGCGACGATCGCGTCGGCGAGCACAGCGGCTACCATGACCACGGGAACGACCACGATTCCGACAACGAGGCGACGACGCAAACACCGACAGAACGACGGGGAGGCCACGGACGACAGAGAGGACGACGAAGAGaacgaggaagaggaggagggaagGGGCCAGAACGAGGCGGAGAAACGGCTGATGCTCGATCAGGATGCCGACAGGCCGATCAGCCCTCTCCGAAGAGACAACAAGGATCGAGCGTCTCGGGATTATCCCACTGCCAACGCCACCGACACGGAAGGGACCAAGGAACGGACGGAAGAAGTCGCGTTGGAGCGACCACCGGTGACGCAGGGCCTGCTGAGAgtgaagaaggaggaggagctgCAGGAAGTGCCAGGTTCTGGAGGCGGCCCAACGATATTGACGACACCGGCTTCGGATGGGGATGGGACCAGGTCAGGGTTGCCGTGCCGGGAGGTTGATGGAGCCGGTAGGAACACGGTGGCGCCGTTTGTTATTGGAGGCCGTCGCACCAGCCCACCGCCGGAAGACTGGAAGCCGTTGGACAAGTGCTACTTTTGTCTCGATGGCAAGCTACCGCACGACGATCAGCCACCCCTCAGTCCGCAGagcgacagcagcagcagctcGCGATCGGCCGAGTCACCGATGTCGGTCCAGGTGGACCCGATGGCAGCATCCGTGGTTGCCGCGGCTCTCAGCGGTACCTATCCCACCTTACTGCCCCAGTGGGTTCTACCACCGAGGGAGGCGCCTCTCGTCGGGGTGCAAGCTCATCAGGACACCGCGGCGCCGGTCGACCAACCGCTCGACCTCTCGGCCAAACCCAAAAATTCTCAGGACAACAACATATCTCTATTGGAGCAACAGAAAATACCTCTAAGGATGCCAGCAGGTATCGACCCCAAGAGTATCTACAATTCGTGTTACCGCGCGAAACCGCGTATGACCGGGCCGGTAGCGGCTGTGGCGGCGGCAGCAGCTGCGGCAGGCGTCGGTGGTGTCCCCGTGGTGGGTGCCGGGGGTGGCCGGAGGGCCTACACCGAGGAGGAGCTGCAGGCCGCCCTCAGGGATATCCAGAGCGGCAAGCTTGGCACACGAAGGGCGGCCGTGATCTACGGAATACCGCGTAGCACCCTACGCAACAAGGTCTACAAGCTTGCGATGGAGCGCGAAAGGGATGCGTCCCTGAGTAGCACCCACTCACACCCTCACGAGCCCGGCGCCccagccaccaccaccacgaccatcaccaccaccaccaccaccaccactactactactactacaacaCCACCAAATACGACCCAAAACGCCTCCGCGACCACTCCGCCCCCGCAAGTGGATGAGTTTAACACACGGCCAGTTGGTCTTGGCGAGGTTGCAAGACTCGAGGTCGACGACAAGGAACTGTCCGGAGCGGAAGAGGAGAAAGAAGTGGAGAAAGCGCTACTGAAGCCGCTGTTGTCCTTGGAAGATCTGGTGAGGTTCTCCGCCCTCGAAGGGAGCGGCGGAGATTCCCTGAGAACTCTGCTTCAGCGAGGACAGGAGACGGGGACCGAGTGGCCTGGTCTCGAACACGCAAATATCGGTCCGTACATACAAAAGATGCTTGCAGCGGCTGCACCCTTCAAAGGTATGGAGACGCAAGACTATCGCATTCCAGAAGTGATGAGAAGGCTGATGAGCGAGGACAAGAGGCTAAACAAAAGCGTGAACGGGGACCAGTCGCAGCCGCACCATCAGCAGCTACATCACCAGCAGTCCCACTCGATGCATCCGCAGACGCAGacccagcagcagcaacagcagcagcaacgcGGTCCGATCACCAACGACGACTTCAATCCGAACATCGAGGAGGAGGCGAGCGACAGCGCCCAAGGCAGAGCGATCCTGAAGATTCCGTCCTACAAGCCTGCGAGCACACCGGGATGCTCGAGCAAGAACGGCGAACCAACTTCCGCCGCATTCGCGCAGGGGTTCGCGGCTGCAGCTGCGGCTGCGGCCGCGGCCTCGGCGTCGAGTCCGGGTCTTCTGGAGCGAGCCAGCCCGGCGTTCTCCGGCACCAGTAGCCCGACCAATTCGCTCGTGGGGAAGACGGTGGCCGTCAACTTCCGCGACGTGATAGCGAAGAGCATCAGCGTGAAATTCCAAGAGGGCCAGCCGGTCGCCACGGCTGGAATGGCCGGATGCCAGAGCGCCGGTATGGTGCAGTCGCAGCAGACCATGGTGACGGATCCGAGCCCGTTCAAGAGAGGCCGATACACGCCGCCACAGCCGGCCTCGCAGCACCAGCAATCGCAGTCCAAGCAGCAGTCCCAGGACGCGAACAAAGCCAAGCCAGCCACCGGTGGCAAGGGGACAAGACCGAAACGCGGCAAATATAGAAACTACGACAGGGACAGCCTCGTCGAGGCTGTGCGCGCGGTCCAGCGGGGCGAGATGAGCGTGCACCGCGCAGGCAGCTATTACGGAGTGCCGCACTCCACCCTCGAGTACAAAGTTAAGGAACGGCATCTGATGAGGCCGAGGAAGAGGGACCAGAAGCAGTCGGACGATAAGGCGAAAGAGACTGCGGCCACGGCTGCGGCGGTGGCGGCCGCGAACATGCGACCGGGTACAGCCGACAAGAAGCCGCAACTGAAGCCACAGAAACCGTTTACACCCCCGAGCGGCATACCAGGGCCCAACGGACTGAAGATGCCGCCGTTCATGGAGGGCATGGCTCACTTACCATTCGCGCCGTTCAACTTTTGGAACCCGACGCCGTTCATGCCGTCGCCGTTCATGGCGGGGGCGCCGAACGTCCCGACGATCCTGCCGGAGCAGTACTTCGCCACCAGCAGGATGCGGGGCTTGCAGGAGCAGCAGAGAAACGCGACGATGgtgcagcagcaacagcaacagcaacgggACAGGGACGGGATCGGTGTGGCCGCGACCACCACGGAGTCAGCCGGCTCGTCGAATTCTCGCGGCACGCCGATGACAAAGTCGTCGCGGGAGGTGGCGGACAGCTTGTACGACGGTTCGGGTGCCAACGGCAGTTTCTTGGACAGCCTGATCAGGTCGAGCCTCGAGACGGGAATATCAAGGGACCAGCGGACGATGACGGAGGCGAGGAGCCAGCAGCAGTCCTCCTCCCAGCAGCAGCTTCCGGAATCGATGAGGAGTAAAGCGTTGATCGACCAGCTGTGCAGAAACTCGAGGCGAACGCCGGTGCCGCGGATGGCTCAGGACAGCAGCGAGGACGAGAGTTACAGGGGACCATCGGCCGCGGGAAGGTCGGTCCCGGAGAGGCCGGAACGCGTGCCCACCGTGGACCTTAGCCCGTCGCCCTCGGAACGGGGCCGCGCCGACGACGGCAGCGACCGGCTCACCTCGCCGCCGACGCCTCTCTCGATCTCGAGAACCGGCAGCAGGGATGAGGACAGTGTTCGCGACTCGAGAATCGACCGTAGCAGTAGGGAGCGCGAGGTCCATAACGGTGGCCAGGATGATCGCGATCGAAAGACTCTGACCATTCAGCAgccgcaacagcagcaacagcagcagcagccgaATAACTACCCGGACTTACTCTACGCCGTATCAACTGACAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGACTCAACAgccgcagcagcaacagcagcagcaacagcagcagaaGGAGTACGCTGCGGTGGGCGGACTGGTTGTGCAACTGCAACGGGGCTACAATACTGGGAACAACAGGTCCGGTGAGCAGACCAACAGTCAACAATCGGCGGAGCAACGCGGCCCCGTGATCAGTATGGAAGACTCCGTTGAGCAGTAG
- Protein Sequence
- MGRRRWKQYQDNLYKGTGSSESVTAQPHHRLYPAFSPSCDQVSGNLEQIGPRTLHPPSSSLPATITTTTATASTAATTTTAATTATTAGLVKQDSLQRHPLQNRHHHQSSAQDLHRHCQQQQQQQEEPRRLRPDEVKVEVAEDEYANGVAREGSPGKTTDTSTATATTVTTGPSIATITTTTSTATGTIATSIATIASASTAATMTTGTTTIPTTRRRRKHRQNDGEATDDREDDEENEEEEEGRGQNEAEKRLMLDQDADRPISPLRRDNKDRASRDYPTANATDTEGTKERTEEVALERPPVTQGLLRVKKEEELQEVPGSGGGPTILTTPASDGDGTRSGLPCREVDGAGRNTVAPFVIGGRRTSPPPEDWKPLDKCYFCLDGKLPHDDQPPLSPQSDSSSSSRSAESPMSVQVDPMAASVVAAALSGTYPTLLPQWVLPPREAPLVGVQAHQDTAAPVDQPLDLSAKPKNSQDNNISLLEQQKIPLRMPAGIDPKSIYNSCYRAKPRMTGPVAAVAAAAAAAGVGGVPVVGAGGGRRAYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDASLSSTHSHPHEPGAPATTTTTITTTTTTTTTTTTTTPPNTTQNASATTPPPQVDEFNTRPVGLGEVARLEVDDKELSGAEEEKEVEKALLKPLLSLEDLVRFSALEGSGGDSLRTLLQRGQETGTEWPGLEHANIGPYIQKMLAAAAPFKGMETQDYRIPEVMRRLMSEDKRLNKSVNGDQSQPHHQQLHHQQSHSMHPQTQTQQQQQQQQRGPITNDDFNPNIEEEASDSAQGRAILKIPSYKPASTPGCSSKNGEPTSAAFAQGFAAAAAAAAAASASSPGLLERASPAFSGTSSPTNSLVGKTVAVNFRDVIAKSISVKFQEGQPVATAGMAGCQSAGMVQSQQTMVTDPSPFKRGRYTPPQPASQHQQSQSKQQSQDANKAKPATGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDQKQSDDKAKETAATAAAVAAANMRPGTADKKPQLKPQKPFTPPSGIPGPNGLKMPPFMEGMAHLPFAPFNFWNPTPFMPSPFMAGAPNVPTILPEQYFATSRMRGLQEQQRNATMVQQQQQQQRDRDGIGVAATTTESAGSSNSRGTPMTKSSREVADSLYDGSGANGSFLDSLIRSSLETGISRDQRTMTEARSQQQSSSQQQLPESMRSKALIDQLCRNSRRTPVPRMAQDSSEDESYRGPSAAGRSVPERPERVPTVDLSPSPSERGRADDGSDRLTSPPTPLSISRTGSRDEDSVRDSRIDRSSREREVHNGGQDDRDRKTLTIQQPQQQQQQQQPNNYPDLLYAVSTDKKSACDSKLIVDHSSQKTQQPQQQQQQQQQQKEYAAVGGLVVQLQRGYNTGNNRSGEQTNSQQSAEQRGPVISMEDSVEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00215624;
- 90% Identity
- -
- 80% Identity
- -