Basic Information

Gene Symbol
Arid4b_1
Assembly
GCA_963932335.1
Location
OZ010661.1:3806952-3813962[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.5e-28 2.1e-24 86.0 0.1 1 89 307 394 307 394 0.95
2 2 8.9 1.9e+04 -3.6 0.1 35 58 1380 1405 1369 1410 0.75

Sequence Information

Coding Sequence
ATGCTGGGAGACGATCCACCGTACCTATCAGTGGGTACGGAGGTTAGCGCCAAGTATAAGGGTGCCTTCTGTGAAGCGAAGATTCGGAAAGTAGTACGATCCGTAAAATGCAGAGTGACTTATAAACAAGGTCTGGGCACAGCGACTGTCGCAGATGACCAGATAAAAGGGACATTAAGAGTAGGTGCGTCTGTCGAAGCTAGACATGGCGAGCGGAAAGAGTTTGTGGAAGCTACTATCACCAAGATTCAAGACTGCAGTCAGTATACTGTAGTTTTCGACGATGGAGATATCACGACGTTAAGGAGAACTGCGCTTTGTCTGAAGAGCGGACGGCATTTTGCAGAGAGCGAAACGTTGGACCAACTTCCGTTGACGCATCCGGAGCATTTCGGGAATCCGGTAATCGGAGGTAGAAGAGGGCGACGGTCCAGGCAAGCGCAAGATGAAAGTAGCGACGACGAGGACAGTCCTCCGCGAGGAACTCGGGACTCAGGTTCTAGCGGGACAGGGAAAGAAGGAATGGAGACTGAACCCGAGATCGGACGGGTTGTATGCGTGGAACTGggggataaaaagaaaaaagataatTGGTTTCCTGGGTTAGTGGTTGCGCCGACTGCTCAAGACACAGTGAGAATTCGAGTGAGAGACGACTATCTGGTGCGCTCGTTTAAGGATGCACGATATTATACTGTCCCAAAGAAAGAGGCCACTGAATTCACAAAAGAACTTGTCAACAAAGTTGAGAATAGCACATTGAAGGTTGCGGTAGAAAAGGCGTTGCTATTTTTAGAGAAGAATGAGTTGCCTCCCCATTGGGATAGGGATTCTCTTTTTGGACATTCTGTATCAAGCGGGAACAGTGATTCCGATGGGGAACTTGATTCGGATAGTTCTGACGACGAGCCCCGCGAAGAGAAAGATCATTTCGTTGCGCAATTGTACAAGTTCATGGACGATCGTGGAACACCTATCAACAATTGTCCGATGATTGGATCGGAGGACATAGATTTATACAGGTTATTCCGAGCTGTCTATAAATTAGGCGGCTACAACCGCGTGACAAATCAGAATCAGTGGAAACTGATAACGCGTCGCCTGAGCTTTACAATGCAAAATTCACCTTCCACGCACAACTTGGTTAAACAGGCCTATAAGAAGTTCTTGCACTCCTTCGaagatttttatagaaaattaggTTGTACTATGGTGAATCATCCGAGGGGTGCGATCCGAAAGCAACGTCCTGGTAGAAGTCTGATTAGAGATAAAGATAGAAATACGCCGGTACCGCCGCAAGCGATGTCGGTCGCTAAGAAcgaaaaggaggaggaggaggagaagaaagtggtggtggaggaggagaagaaggagaggaAGGAAGTTAAAAAGGAGCAAGTGAAGGAAGAAGAGATTATAAAgataaagaagaagaaggaggaattCGAAGAGAGCGGTAGTGGGCAGGAGAGCGATGTAAACGTGGAGGCCGAGGCGGAGTCGTCCAGTAGTGAAAAGTCTCAAAAGATCATCTCGACGTCGTTAACGTTACAAAACAGGGGTAAGTCGAAAAGTAAAGAAGAACCGAAGAAGAAGGTGatagagaagaagaagagcgatCCCAAGAAGCAAGAGAAGAAGGACGAGAAGACTAAAGAGGAAGAAGCAGCTGCCAAGACAAGGTCCAAATCGAAAGATGATAGTGTAAAAGCCAAAGTGTCTTCCGAGACTAGGGAGACGCGAACGCCATCCAGAGAATCGGAGAGGAAAGCGCTAACCAAACAGAGGCGGCTAACCGACGAGGAGTTAAAGAAACGCGGGAGGAAGCGTAAAGAATACGAGGCGGAGAAATCACGTGCCGACGAACAATTGGCAGAGTCTGCGCCTTGCTACAAAGGGCCCGTAGAACTGGGGGATAGATTGAAAGTATATTACGGGCCCACTCATGAGTCTAAAGTCACCTACGAGGCGAAAGTGATCGACAAGGAGAAGGATGGAACAGAGCCGATGTATCTTGTACATTACACTGGATGGAACACGAGGTACGACGAATGGATCAAAGCGTCAAGGATAGCACAGAATTTTACGCAAGCTCAAGGTAGGGTGAAACGCATTAAGGCCACGTCACGGCCGCAAACTCCCAGTACGAATTTATCTAATAGCGTAAACAAATCATCGTCGAAAGTTGCATCCAACAGCACCAGCTCAAGCACGTCCCAAAGTCGTCGCCGAGCTCAAAGCGTAGCCCCCGCGAGCACAGTcgggtcgtcgtcgtcgtcgtcgtcgtcgtcgtcgacgtcaACATCTGTGAAGGAAGTAAagaaggaggaaaaagagaaGGATAAAGAGGCGTCCCAGCCTACGGCCAGGTCTACGACTCCGTTGTCAGTTACAAGCTCCAGTTCCAGAACCAAGAGTCCAGCAACACCAGCGAACAATCGTCATACTACGCGGATGACGAGGAACGCTGATGTATCTGGCGTGGAACACCGAAGGCGCACTAGAAGAATGTCCGGGCATACAGATATATCAGTGGCGTCAGAGAGTGAAGACAGTGAGTTGTACGATTCTGATACAACGGAGCCTGAACAAGTGAGAAGCAAGTCTTCTAAGGGCAGCGACGAAAGAAAGCGCAGAGAAGCGAAATGCAGAGCGGACGACAGAATGAAGCCTGACGAGACCAGCGAGGGAGAAGAAGACAAGGATAACTTAGAGGAGCCACGTAGAGGTAAACGTGTAAGAAGAACGATCGGTAAATCCCAGTGTATAAAATCCGAACCAGATAGCGACGAAGAACAACCTAAAGGTCGAGATTTCGATTTAAATCAAATACGATCCGAACTGAAGGGTTTCGATAAGGCGGTGAAATTGGAACTTGTCAGAGTTGAGCCTGACCCGGAGGACGAGATGAAAATCGATGAGAAAGAGAACCTTGCCTTAGTCTCGCCTAAGTTGGAGAAAAGTCTGGTGGAATCGTCCAAGTTGGAAACAACTGCCGAGTCTAAGACTGTGGATAGCACGGAGGATATATATGAATTCAAAGAACCAGAACCATTTGAGTTTGAAGTGAGAAATAAACGAGACACCAGCAGTGGAGAGAAGGACAAGGTGAAGAAAAGAGTGTTCGAAGAAGAACCGAAAAGTCCTAAGAAGAAGCAGAAATTGATTGTGTCGCCACTCATAAAAGAAGCTAAGCCAGAAATAGATACTGACTCGCGGAAAAAGCCGAAGAAATTGTTTAGTAAAAGGGTCGACGATATTACGGAAAGTTTGTCGCCCCATAAATCGCTGCAGTCTACTACGTCCTCGACAACGTGCGAAGAAGCATTCGATAAACTTTGCGAATCGCCATCGTTTAGTCAAGCAAAATCTGCTGCTATCATCGAAGAAACTGGTAAGATAACTAACGGCATAGATCTTTTATTCAGCGACTTGCCTGGTGACGACGATGGTACCCATGACGATTCAGAGGATCGCTTGATAATATCGGAGGCAGAAGTTTCGGAAACCGAGCAAGAGAACTTATTTACATATCCGCAGGAGATGTTCCCTGTTAACGACACAACCACCGACTCTTTGGAATCGAACAAAGAGGAGGATACAAATCCACAGATCGAATCTGTAAGGGAATCTGACGACTCGATTCGACCATCGGTTTCAAGCAAGCCTGAGATACCTGTCGAGCAGAAGCAAACCGTTAAGCTCTCTCCGTTACATAGGCAGTCGCCAGAATTGAAAACACTCGACACAAAATTATTGGACGTCACGCCTGTCTCGTCTCCGATTGTGGCAGCTCCAGCACCGATTAGTGCAAGGCTGCCAGCTACGTCTACGATAGAGGAGAAACTTTCAGCAGCAATGGCGTTTCGTAACAAAGCAAAGGATACTAAAAAGGAAGACGACATTCCCGAAATTGTATGGAAGCCTTTAAAAGAGATTCCTAAGAAATTGGATACCATAATCGGACAGAGAAATAAGGAGGATCAAAATGCAGCTAAGGTAGAGACGGAGAGTAAAAAACGGCAGGAGGAAGAGCTTGCGATGAACAACGAGGAGCACTGCAGGGAGATCATGCGCATAGTGATTAAACAAAAAGAGGAGGAACTTCAGCAGCTTAAATTGAAGAGAGAGGTGGAATTGAAGAAGTTTGTTGAGACAAAAGCGGAGTACAAGCAAGTGGAGAACAGCAGGGAAGAAGAATGGAAGCGCGTGGAGAATGAGGACATCGAGAAAATGGAAGATGAATTTAAAGAGCACGATTTtaaggagaaggagaaagagaagcAGCGTAAGAAGATAGTCAGCCAAGAGATAGTGGATTCTACGGACAGTAGCGACTCCGAACAGAGGCTAGTAATTGATAACGAGGAGCCACAAGATGTAAAAGCACCGTCGAACTTCGATATTAAATTAAGAGCGGAGTTAGACAGACTTCAAGATTCGCAGGAAAGGTATTCGAAATTACAGTCGCAGAAGTCTATGCAACATTTAAAGCACCAGCAACAAGAATGCGTCACCGAATGCAAAACTGAGAGCCTACCTGTTGCGAAAGCAGACGAAGAGGGAGAGACAATTAATTCATTGCTATGCGAAGAAGAAATACCAGGTTCGCCAGCGCCTATTTCTGAAAGTATCGAGCAAATAAATGCTGGTCCATCCTGTTCTCCTCCAAAGGTTGAAACGTCGGAAGCTAGCATAGTACTCATGGAAATGCCTTTCGCAAGTGCACCTACGTCAGGCCAAAGTACAACCAGCAGTGCTGTGCCCACTCTGAGTATGGCACTGCCGAAAGCTGTAGAAACGTCTGTCCCAGTCTCATTGCCGATGCAACAAAATCCTCCTTTAGGGGTGAGGCAACAATCGCACCATCAACATTTGCCTGTGCTGATGCCTGCGCAAAGACGAGAGAGCAACGAAGCAGCACCCGTAATGGACAACACTCCCCCGACTACGCCGGACTCTAGTATTTCGAATATTTCTGGATCTCCAAGGGAGGAAAGGACCGGCGGTTCGTCGCCAATCTCCGAGGATAATATGAAACTTAATCGTGATAGTTCTGAAGCAGATAACGATAGCGGTGGCAAGGGCCCTGGTTTCAGCGAAGATGACACATTACCAAATGTCGATGGAAGTTCCGCGGACAGAATGCTGAAGCCACCGGCGAAACGATCTGTCGAGGAAACACAATCTCCCAAGAAGCGTAAGAGAAGTAGAAAGCATTCGGAATGTGATAAGAATGCTGCGAAGAAAACAGGAAGGCATAGTAGCAGGCACGGTAGACAACACGGTGCTGGAAGCGACAGTGATGATACAAGCGAAGGTTCTAATCTGTGCGCAGTGAACTCGACACCCACGAATCACACGAATATAGCTGCTACTGTCGCCGATCTCAGTAGTTACTCGTCAAGATCACCACGACCCACGAAATATAATTTCTACGTAGAATTAGATCCCGAGTTGGATGGAAGTCAAAGGATAGCTGTATTACAGCAAAAGTTAGCCGAGTTGCGTAAAACGTACAATGCTGTGAAAGTAGAGCTCGCCGCTATTGAAAGACGCAGGAAAAAGTTAAGGAGAAGAGAACGGGAAGcTATAAAGGCAGCTAAGGCAGAAATGCAACAAGCTTGTTCGTGA
Protein Sequence
MLGDDPPYLSVGTEVSAKYKGAFCEAKIRKVVRSVKCRVTYKQGLGTATVADDQIKGTLRVGASVEARHGERKEFVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFGNPVIGGRRGRRSRQAQDESSDDEDSPPRGTRDSGSSGTGKEGMETEPEIGRVVCVELGDKKKKDNWFPGLVVAPTAQDTVRIRVRDDYLVRSFKDARYYTVPKKEATEFTKELVNKVENSTLKVAVEKALLFLEKNELPPHWDRDSLFGHSVSSGNSDSDGELDSDSSDDEPREEKDHFVAQLYKFMDDRGTPINNCPMIGSEDIDLYRLFRAVYKLGGYNRVTNQNQWKLITRRLSFTMQNSPSTHNLVKQAYKKFLHSFEDFYRKLGCTMVNHPRGAIRKQRPGRSLIRDKDRNTPVPPQAMSVAKNEKEEEEEKKVVVEEEKKERKEVKKEQVKEEEIIKIKKKKEEFEESGSGQESDVNVEAEAESSSSEKSQKIISTSLTLQNRGKSKSKEEPKKKVIEKKKSDPKKQEKKDEKTKEEEAAAKTRSKSKDDSVKAKVSSETRETRTPSRESERKALTKQRRLTDEELKKRGRKRKEYEAEKSRADEQLAESAPCYKGPVELGDRLKVYYGPTHESKVTYEAKVIDKEKDGTEPMYLVHYTGWNTRYDEWIKASRIAQNFTQAQGRVKRIKATSRPQTPSTNLSNSVNKSSSKVASNSTSSSTSQSRRRAQSVAPASTVGSSSSSSSSSSTSTSVKEVKKEEKEKDKEASQPTARSTTPLSVTSSSSRTKSPATPANNRHTTRMTRNADVSGVEHRRRTRRMSGHTDISVASESEDSELYDSDTTEPEQVRSKSSKGSDERKRREAKCRADDRMKPDETSEGEEDKDNLEEPRRGKRVRRTIGKSQCIKSEPDSDEEQPKGRDFDLNQIRSELKGFDKAVKLELVRVEPDPEDEMKIDEKENLALVSPKLEKSLVESSKLETTAESKTVDSTEDIYEFKEPEPFEFEVRNKRDTSSGEKDKVKKRVFEEEPKSPKKKQKLIVSPLIKEAKPEIDTDSRKKPKKLFSKRVDDITESLSPHKSLQSTTSSTTCEEAFDKLCESPSFSQAKSAAIIEETGKITNGIDLLFSDLPGDDDGTHDDSEDRLIISEAEVSETEQENLFTYPQEMFPVNDTTTDSLESNKEEDTNPQIESVRESDDSIRPSVSSKPEIPVEQKQTVKLSPLHRQSPELKTLDTKLLDVTPVSSPIVAAPAPISARLPATSTIEEKLSAAMAFRNKAKDTKKEDDIPEIVWKPLKEIPKKLDTIIGQRNKEDQNAAKVETESKKRQEEELAMNNEEHCREIMRIVIKQKEEELQQLKLKREVELKKFVETKAEYKQVENSREEEWKRVENEDIEKMEDEFKEHDFKEKEKEKQRKKIVSQEIVDSTDSSDSEQRLVIDNEEPQDVKAPSNFDIKLRAELDRLQDSQERYSKLQSQKSMQHLKHQQQECVTECKTESLPVAKADEEGETINSLLCEEEIPGSPAPISESIEQINAGPSCSPPKVETSEASIVLMEMPFASAPTSGQSTTSSAVPTLSMALPKAVETSVPVSLPMQQNPPLGVRQQSHHQHLPVLMPAQRRESNEAAPVMDNTPPTTPDSSISNISGSPREERTGGSSPISEDNMKLNRDSSEADNDSGGKGPGFSEDDTLPNVDGSSADRMLKPPAKRSVEETQSPKKRKRSRKHSECDKNAAKKTGRHSSRHGRQHGAGSDSDDTSEGSNLCAVNSTPTNHTNIAATVADLSSYSSRSPRPTKYNFYVELDPELDGSQRIAVLQQKLAELRKTYNAVKVELAAIERRRKKLRRREREAIKAAKAEMQQACS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00863745;
80% Identity
-