Afla021646.1
Basic Information
- Insect
- Andrena flavipes
- Gene Symbol
- nfxl1
- Assembly
- GCA_963971345.1
- Location
- OZ020481.1:69688081-69690996[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 1.1 1.7e+04 -3.2 1.1 15 19 126 130 125 130 0.81 2 20 0.44 6.9e+03 -2.0 0.9 4 10 161 167 161 167 0.91 3 20 5.5e-08 0.00087 20.0 15.1 1 18 175 191 175 192 0.98 4 20 9.3e-07 0.015 16.1 13.3 1 19 229 246 229 246 0.95 5 20 2.7e-05 0.42 11.5 11.4 1 19 281 300 281 300 0.93 6 20 0.00031 4.8 8.1 9.6 1 18 336 353 336 354 0.97 7 20 0.67 1e+04 -2.6 0.3 1 4 363 366 363 367 0.88 8 20 0.0068 1.1e+02 3.8 7.6 1 12 388 399 388 399 0.94 9 20 0.47 7.3e+03 -2.1 1.0 6 10 409 413 408 413 0.92 10 20 4.9e-07 0.0077 17.0 14.8 1 18 419 436 419 437 0.93 11 20 1.1 1.7e+04 -3.3 0.7 6 10 466 470 465 470 0.85 12 20 0.0001 1.6 9.6 9.8 9 19 485 495 483 495 0.90 13 20 0.0064 1e+02 3.9 6.3 1 12 505 515 505 515 0.95 14 20 0.85 1.3e+04 -2.9 5.8 14 18 547 551 547 552 0.89 15 20 0.0016 25 5.8 8.0 1 12 588 599 578 599 0.91 16 20 0.78 1.2e+04 -2.8 1.7 6 10 615 619 614 619 0.88 17 20 0.005 78 4.2 16.4 4 19 629 644 627 644 0.91 18 20 2 3.1e+04 -6.5 3.4 9 13 650 654 650 654 0.71 19 20 6.7e-06 0.1 13.4 11.3 1 16 689 703 689 709 0.88 20 20 0.72 1.1e+04 -2.7 0.4 5 10 738 743 738 743 0.92
Sequence Information
- Coding Sequence
- ATGCAGAAATTTAGACGAATTCAGGCGCAAAATAAAGTAGCGATTAATAAGCATTTAGAAGCGAACGCCTATTTAGAATCGTCTAGCGAAGATGAAGATGATATAAACGAGGAGGATATTCAGAATGCAGTCGGCAAAGTCCTATCCGCTTACGAAGGAAGGGAGGTGGACGCGGAGAAGATTTTGTCctatttaattaatatctttCAGTCCGGAAGTGCCGTATGTTTAATATGTATCTCGACTGTAAAGAGAGCAGATCCGATATGGAACTGTAGCAAATGTTTTGCTTTCTTACACTTGACTTGCATCTTGCATTGGATTCAAGATAGTTTAAGTATTAAACGCGAGAGAGGCATCGAACCAGTCTGGGCATGTCCGAAATGTCGTATGGAATACGGACAGGCGCAAGTTCCTCGTAAATACACTTGTTTCTGCACACAAGTTACGGATCCTTCTTACCAGCCATGGAATATTCCACACTCTTGCGGGAATACTTGTGGCAAACCATTGCAGCCAGAGTGCGGACACAAATGCGTATTACTTTGCCACCCTGGCCCGTGCCCCCCATGCGCCAGAACAATCTCGATCAAGTGTTATTGCGGCAAGCAAATGCCTCAGCAGCGACGATGCAACGCTAAACACTGGAGCTGCGGGACCGCGTGCAACAAGAGATACCAATCGTGCTCTCACACCTGTAAACAAATTTGCCACGCCAATGATTGCCCTCCTTGTCCAGAGACATTGCTGCTGGAGTGTCACTGCAAGAGTACCAAGGAACTGAAGCCATGTTCCGAGGGCGTGTGGATTTGCGATAATCCTTGTCGCAGGCCGCTGTCTTGTAACGTTCACGTCTGCCAAAGCACGTGCCACTTACCTGGCGACTGCGGAGTATGCCCTTTGGAAAAGAACAGAACGTGCCCATGCGGGAAAAAGCGTTACGCTATTTCCTGCAAGCAGGAGCAGCTGCCCACTTGCGGCGACACGTGCGGCAAGCTACTCGACTGCGGCTCTCACCTTTGCAACATGAGATGCCACACAGATCGATGCGGGCAATGCTTGGAAGTGGTGAACAAGTCGTGCCGATGCGGCAGCCACGAGAAAGAGATCGCGTGCGGCAAAGAGTTTCACTGCAACAGAAAGTGCACGCAGATGCGTCTCTGCGGGAGGCATCTGTGTAACAAAAAGTGTTGCGATTGCCTGATTAAGAATACATACAACGCGTGCGAGAAGGTATGCGAGAACACCTTGAGCTGCCATAAACACAAGTGTGCCGCTCCCTGCCACAGCGGTCCGTGCTATCCGTGCGCGCGCACGGATGTTATCCAGTGCCGGTGCGGGCACAACAAGATAACGGTACCATGCGGTACGAGGAAGAAGATTAAACTTAAAGCCTGTAACAAGCCTTGTAAAGTCCCGCCGATCTGCCACCACCCTAAAAGGGAGACTCACAAATGCCATCAAGGGCCGTGCCCGCCTTGTAAGAAAATCTGCGATTTAGTGTACAAACGATGCGGTCATTCTTGCGTCGTCGTTTGTCACACGAAAGTGTGGCTGAAGGTGAGTAAGAATGACGTGAAAACGCCGATTACAGGACCATGGGATATACAGAAAGAAACTATGCAGCTGAAGACGTTACCCTGTCCGCCGTGCGAGGTATCGGTGCCAGTTACATGCCTGGGAGGCCACGAGACGCGTCCGTGGCCTTGTCATATGGCCCGACCCACTTCCTGTGGGAGACTCTGCGGAAGAATGTTGTCCTGCACGAACCACAGTTGCGAATTAGTTTGCCACAAAGTAACGGCCCCCGCGGATGGCAAAGCTGGCGCTCTGTGCATGGAATGCGAGAAACCATGTTTGCTACCACGGCCGCAAGGTTGCACGCATTTGTGTCCGAAACCCTGCCACCCGGCGCCGTGTAGTCCTTGCAAGCAACTAGTCAAGATTCCATGCCACTGCGGTATAGTCACATTGTATCGAAGATGCGCCGAACTGACCTCCGCTACGGCTGAAAAACGCAACGCATTGCTGAAGTGTGGAAATCAGTGTCCGAAAAATTACATTTGCGGACATCGGTGCATAAACGACTGCCACCCAGGCCCGTGCAAGAACGAAAATGAATGCAATAAAAAAGTGAAGCTGTTTTGCTCGTGCAAACGTATTAAGAGAGACTTCGCGTGCTCTGCGATGCAGAAGCAAAAGCCTGAAATAAAATGCGACGATGTCTGTAAGCAATTGAAGAACGAGAAGAGCCAAGCGGAAGCCGCTCTGTTGGAGCAAAAGCGACAGGCGGAGAAGATACGGAACCAAGAAGAGATAGAGAAGTTCGAACGGAAATTCAAACCCCGTCGCAAAGGAAAGGACAAATTCGACAATTTAAAACACTCGCGACGAGAAGCCAACAACAATTATTGGAAATACTGCATTCTAGCGATCGTAATGTGTATAGTAGGCATAATAATAGTATTTTACGCGGGCATTTAG
- Protein Sequence
- MQKFRRIQAQNKVAINKHLEANAYLESSSEDEDDINEEDIQNAVGKVLSAYEGREVDAEKILSYLINIFQSGSAVCLICISTVKRADPIWNCSKCFAFLHLTCILHWIQDSLSIKRERGIEPVWACPKCRMEYGQAQVPRKYTCFCTQVTDPSYQPWNIPHSCGNTCGKPLQPECGHKCVLLCHPGPCPPCARTISIKCYCGKQMPQQRRCNAKHWSCGTACNKRYQSCSHTCKQICHANDCPPCPETLLLECHCKSTKELKPCSEGVWICDNPCRRPLSCNVHVCQSTCHLPGDCGVCPLEKNRTCPCGKKRYAISCKQEQLPTCGDTCGKLLDCGSHLCNMRCHTDRCGQCLEVVNKSCRCGSHEKEIACGKEFHCNRKCTQMRLCGRHLCNKKCCDCLIKNTYNACEKVCENTLSCHKHKCAAPCHSGPCYPCARTDVIQCRCGHNKITVPCGTRKKIKLKACNKPCKVPPICHHPKRETHKCHQGPCPPCKKICDLVYKRCGHSCVVVCHTKVWLKVSKNDVKTPITGPWDIQKETMQLKTLPCPPCEVSVPVTCLGGHETRPWPCHMARPTSCGRLCGRMLSCTNHSCELVCHKVTAPADGKAGALCMECEKPCLLPRPQGCTHLCPKPCHPAPCSPCKQLVKIPCHCGIVTLYRRCAELTSATAEKRNALLKCGNQCPKNYICGHRCINDCHPGPCKNENECNKKVKLFCSCKRIKRDFACSAMQKQKPEIKCDDVCKQLKNEKSQAEAALLEQKRQAEKIRNQEEIEKFERKFKPRRKGKDKFDNLKHSRREANNNYWKYCILAIVMCIVGIIIVFYAGI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00865697;
- 90% Identity
- iTF_00085854;
- 80% Identity
- -