Basic Information

Insect: Andrena flavipes
Gene Symbol: gtf3a
Assembly: GCA_963971345.1
Location: OZ020480.1:67260148-67264532[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 8.5e-05 0.011 16.9 0.1 2 23 754 775 753 775 0.97

2 16 0.92 1.2e+02 4.3 1.1 3 23 809 829 808 829 0.97

3 16 0.00028 0.036 15.3 1.2 3 23 838 859 837 859 0.98

4 16 0.0029 0.36 12.1 2.0 1 23 866 889 866 889 0.95

5 16 0.0001 0.013 16.7 0.7 1 23 895 918 895 918 0.94

6 16 1.4 1.8e+02 3.7 2.5 2 23 926 946 926 946 0.94

7 16 1.5e-07 1.9e-05 25.6 2.1 2 23 952 973 951 973 0.97

8 16 2.4e-06 0.0003 21.8 0.2 1 23 979 1001 979 1001 0.99

9 16 0.0006 0.075 14.3 2.4 2 23 1013 1035 1012 1035 0.95

10 16 0.0085 1.1 10.7 2.5 1 23 1041 1064 1041 1064 0.96

11 16 0.013 1.6 10.1 3.0 2 23 1086 1108 1085 1108 0.95

12 16 0.0012 0.16 13.3 1.4 2 23 1115 1137 1114 1137 0.96

13 16 4.1e-05 0.0052 17.9 1.0 2 23 1145 1166 1144 1166 0.96

14 16 0.0013 0.16 13.2 2.3 1 23 1172 1195 1172 1195 0.96

15 16 0.35 44 5.6 3.2 2 23 1202 1223 1201 1223 0.96

16 16 0.01 1.3 10.4 2.6 1 23 1229 1251 1229 1251 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	8.5e-05	0.011	16.9	0.1	2	23	754	775	753	775	0.97
2	16	0.92	1.2e+02	4.3	1.1	3	23	809	829	808	829	0.97
3	16	0.00028	0.036	15.3	1.2	3	23	838	859	837	859	0.98
4	16	0.0029	0.36	12.1	2.0	1	23	866	889	866	889	0.95
5	16	0.0001	0.013	16.7	0.7	1	23	895	918	895	918	0.94
6	16	1.4	1.8e+02	3.7	2.5	2	23	926	946	926	946	0.94
7	16	1.5e-07	1.9e-05	25.6	2.1	2	23	952	973	951	973	0.97
8	16	2.4e-06	0.0003	21.8	0.2	1	23	979	1001	979	1001	0.99
9	16	0.0006	0.075	14.3	2.4	2	23	1013	1035	1012	1035	0.95
10	16	0.0085	1.1	10.7	2.5	1	23	1041	1064	1041	1064	0.96
11	16	0.013	1.6	10.1	3.0	2	23	1086	1108	1085	1108	0.95
12	16	0.0012	0.16	13.3	1.4	2	23	1115	1137	1114	1137	0.96
13	16	4.1e-05	0.0052	17.9	1.0	2	23	1145	1166	1144	1166	0.96
14	16	0.0013	0.16	13.2	2.3	1	23	1172	1195	1172	1195	0.96
15	16	0.35	44	5.6	3.2	2	23	1202	1223	1201	1223	0.96
16	16	0.01	1.3	10.4	2.6	1	23	1229	1251	1229	1251	0.98

Sequence Information

Coding Sequence: ATGCAGCACATTGAAGTGAATAACAGAGATCATAATTACAGCGAAGTAAAAGTAAAGAATCTCGAGTGTAACGATGGTAGTATTCAAAATGTGTTCGACAACGATGGTAAAGTAGCGTGTAAGTCGAGTAAATCTGCATTAACATCGAGCAAAGAAACATTTGGTCAGATTAAGGATATAAACGAGTTGAAGAAGATAACGCCACGTGTGAAGCTATTGGCTCACGATGCTAATAGCTTGAACGAGTTGACTAAAATCTCGTTACACAACAAGATATCAGCACAAAAGAAGGTATCGATATCGGAGAAAACGAAGCAAGAACtaaagaaatattgtaggactTGCGCAGGTTTGAAGCTTCCATTAGTTGATATTTTCAGCGAGAAAGGCATTCAGATGAGATTAAGTCAACAGATTAAACACCTGGAAGAAATAAACTCGTACGATAGTCTATCGACTCAAATGTGCATGGACTGTATTTGCGACTTAAAAATgagttataaattttttatgcaGATTAAGAAAGCAGAAGTTAAATTAAAGTCTATTCACGTTACTCTGACAGATACCGCGACAAGAAATGTAGAGACGAACAAGGCACAGGCTGTAACGAGCGCGGAGAATACAGAGACGCAGACAGAAAATGTCTCTATAGAGTACGGTACGACCGAGCCGTCTACGAGTAAAGAATATAACGAACAGACGCCTGCGGCGAATATACATGCGGCGAATATACCCGCGACTTCTGCACTGAAAGATAATCAAAAGTCTTCGGAACAAGTTAACGAAGTAGATACGATAGAAATACTGTCAGAAATCAAGACCGAAGTTGAGATTTTTGATGATATGACGACGCAACATAACAGCGATGATAATGAGTCTATAGAAGAGTTCGATCCAGACGATCCACCCTTTCAACCTGACAGTTCCGACATTGGGGACTCTGATGACGAAGTAGATGTACAAACATCAAATGTAAAAAGGCAAAATACCCAGCagaaagaaaatattataaaacagTGTTTACAGccagtttttatttatgatAATAATTCCGTTCCAGATAATGAAAACACAGATTTTAATCAAACAACCTATAAGTACGATACGTCGCTAAATGCATATATTAAAGTGGAAGGTTCGGAAGGTAGTAATTATACCGCTGAGCCACATAGCATATCTAAATTTGAAACTGTATGTAACAGCGAAAGTACAAAAGAATTTGGTAAACAACCAAATATATTAAAGCGACGGCTTTTGTTACAAAATAAGAAAGAGTCCACCGAAGAAATTGATGAAAATACCTGCCAGTCGAGTGTGTCCGATAAAAATGGGGGTCATAAAGATATTAAAGTACAAAAGTTAGATGTACATAATCCTTTAAGCATTAACAGTAATCAGGAAGATGGAATCATGTATGTTACTGTTAAGGGTTCTAAACCAAACGAATTACTGTTGGTAAAAGTTAAGAAAATGGATAAACCATTGGAGAAGAAAGATGACAAATCCTCGGGGAAAAAGAGCTTCGACATCAAACCGATGGAGAAGATCTTAAAGCGATACGAAACATTAGCCACGAAAGAGAAGGATTTGTTTCCAGAACGGACAAAAAAGTCTGAGATAAGGGAACAGATAATTGAAGAGCAAATAGAGGAGTATAAGAAGAAGCGGGAGAAAGTACTAGGTGGGCATGCTAACATTTCCCTTCCTTTGAAACTCGAGGAGTCTCAAACTCGGTATGTTAAGCGTAATGAAAATCAAGAAAGTCAAAAGCCGTCTGTGTGTATAGAAAACAGTCCAATTGTAAATACACAAATCGACAAAGATAATAATGATAGCAATGCCGATCAGACCATCAAAGCTGAGAATGGTATTTCAGAGATTATAGAGACGGAAAAGGAGAAGTCTGTTAACGAAAAAACATATGTAAATACTGAAGAATATTTATCACGTTTAGCGAAACTTAAGTTGAAATGGGAAgaagcaaagaaaaaaaaagaatctcTTCAAAAAGAACTGGATGATTCTTATACAGAAGGTAACATTGAAAAATTGGCAAGAATTCtaggagagaaagaaaagaatctgcaagattttcaggaataCTTGAAGCAACGTAAAATTGTAATTACAAGGCTAAAGGACGAGGATATTATTTCTCTTTACGAAGATAGGAATAACGCAGTgcttaaaaataatttacccGATTTAATAGACGAAAGCCAACCAGCGGATTATATACCGGAGGAGAATTATTTGGAATGCGATTATTGTCCAGAAACATTCGCTTCCAAAGATGTCCTCGAAGAGCATTTGAAGATGCACGACTATAAGATCATGCATTTCTGCGAGGATTGCATGGAAGAGTTTCCAACAAATAAGGCGAAGAGAAATCATAACATAGTCTGTATAAAAAAGTTACTGTGTAAATACTGCGACATTATGTTAGATTCGAAAGGTAAAAAACGCCAGCACGAACAAAAGCATTGCGACAATATGTATGGACAGCTGTGCGACGTGTGCGGAGAAAAGTTTAAACACCAGGGTACATTGGATCAGCACGTAAAAACTCAGCACATGAGTTGGGAGAAGATATATCAGTGTCCGAAGTGTCCGAAAAAATTCGCATTCAAGCAGAAGCTTAGTTTCCACCTAAAATCTGTCCATACGACATTGAGAGCTTATTTGTGCGAGGATTGCGGAGCAGATTTCAAAAATCCTGCGAGTCTCAGGCACCACAGAATACGTAAACACCAACCAGTGGGCAATAAAAGGGAGTGCCCAGTTTGTCACAAGTTAGTACCGTTCTATAGTCTTTCAAAGCACATGCATACTCATAAGGCGTATACTATTCAGTGTCCGCACTGTGAcaaaatgtttaaaaacagTTCAACTTTGAAACAGCACGTAAGGATTCACGAAGATCAACGCCAATATAGATGCGACACTTGCGGTGTTGGCTTTAATAGGCGCGATGGGCTGAGATTGCACATGAGAGTGCACGAGAAAACTGATAGTAGAGGATTGAAAGAATGCTCGTGCCAAGTGTGCGGTGAAAAGTTTCCAAATCACTCGACGCTTGTTATCCATAGGAATAGAGTACACAAAGATGGTAGACAGTACACGTGTCATATATGTAACAGGTCGATGATCTCAACTAGATCGTTAGAGTGGCATATGTCCCATATACACAATGAATCTCTACCGGGTATCGTGAAGGAAGATGCGGATGGAACGCCGGAGAAGAAAAGAGTATCCTGTTACCATTGCAATAAGACATTCAAAACCGAGATGATTCTGAGAACGCATATTAAAAACACTCACATGGAGAAGGATCCTATGAAGTGCTTAGATTGCGAGTTAACGTTCACTTCTGAAGTGAGATTGAGGCACCATATGATGGTGACGCATAATAGATTAGAAGGAACTTTACCGTGTCCACATTGTCCAAAGAGATTTGTAAATCAACTTAGGTTAAAAACGCATATGATATCCCATTCCGAAGAGAGACCGTATACTTGCGAAATCTGTGGATTTAATTTGAAAACTAAGATTCAATTGATTAAGCACCATCAAAATAGGCATAGCGATGAGAGGCCCTTGCAATGTAGATACTGTCCATGGAGATGTAAACAAGTTAGCGCTCTTGTATGCCACGAAAGAACTCATACGAACGAACGACCGTACTCTTGTAGCGTATGTAGGCAACGTTTTAAGTATCTAGgtgataaaaataaacatgAGAGAAGACACGAAAGCTTAGGAGGGTCTGGATTTAAAAGGATAGTACCTGGTCGAAACATCAAGCCTAAGGTGCAAGAAGATTCTTCTTGCTCCGATCAGGAGCAAGAAGGCTTGAGTAACGCAGAACCTCAGGTCCCTGAAGACGAATACGAAGAGCAGGGAGATCAACAGTACGAGGAAGAACAGATAGTTAAATTTGAAGAGCAGGAAATAGTGAAGTTCGAAGGGCAAGAAATAGCGGAAGAATACGAACAAGTTTACGAGCAGGAATACGAAGAGACGTCCAGGGAAGCTTCAGACGCAGCGGAAGTTATAATGCATATGGAAGACACTACTGTTTACACAGAGGAAGTAACGGCGGATAATATCGAATCTGCGGAAATAATGGCGGATGAAATAATGACAAATGAAATACTACAATCAGGTGCTGTGGTTCATTTGCAACAAGAAGATGATTCAGGGAAAATACAAGTGATACCAGTGATGTTGTCCTTACCTGATCTGTCTGATGCAAATACAGAGGTCAATTTGGCTACGGCATCCATCATGTataataattga
Protein Sequence: MQHIEVNNRDHNYSEVKVKNLECNDGSIQNVFDNDGKVACKSSKSALTSSKETFGQIKDINELKKITPRVKLLAHDANSLNELTKISLHNKISAQKKVSISEKTKQELKKYCRTCAGLKLPLVDIFSEKGIQMRLSQQIKHLEEINSYDSLSTQMCMDCICDLKMSYKFFMQIKKAEVKLKSIHVTLTDTATRNVETNKAQAVTSAENTETQTENVSIEYGTTEPSTSKEYNEQTPAANIHAANIPATSALKDNQKSSEQVNEVDTIEILSEIKTEVEIFDDMTTQHNSDDNESIEEFDPDDPPFQPDSSDIGDSDDEVDVQTSNVKRQNTQQKENIIKQCLQPVFIYDNNSVPDNENTDFNQTTYKYDTSLNAYIKVEGSEGSNYTAEPHSISKFETVCNSESTKEFGKQPNILKRRLLLQNKKESTEEIDENTCQSSVSDKNGGHKDIKVQKLDVHNPLSINSNQEDGIMYVTVKGSKPNELLLVKVKKMDKPLEKKDDKSSGKKSFDIKPMEKILKRYETLATKEKDLFPERTKKSEIREQIIEEQIEEYKKKREKVLGGHANISLPLKLEESQTRYVKRNENQESQKPSVCIENSPIVNTQIDKDNNDSNADQTIKAENGISEIIETEKEKSVNEKTYVNTEEYLSRLAKLKLKWEEAKKKKESLQKELDDSYTEGNIEKLARILGEKEKNLQDFQEYLKQRKIVITRLKDEDIISLYEDRNNAVLKNNLPDLIDESQPADYIPEENYLECDYCPETFASKDVLEEHLKMHDYKIMHFCEDCMEEFPTNKAKRNHNIVCIKKLLCKYCDIMLDSKGKKRQHEQKHCDNMYGQLCDVCGEKFKHQGTLDQHVKTQHMSWEKIYQCPKCPKKFAFKQKLSFHLKSVHTTLRAYLCEDCGADFKNPASLRHHRIRKHQPVGNKRECPVCHKLVPFYSLSKHMHTHKAYTIQCPHCDKMFKNSSTLKQHVRIHEDQRQYRCDTCGVGFNRRDGLRLHMRVHEKTDSRGLKECSCQVCGEKFPNHSTLVIHRNRVHKDGRQYTCHICNRSMISTRSLEWHMSHIHNESLPGIVKEDADGTPEKKRVSCYHCNKTFKTEMILRTHIKNTHMEKDPMKCLDCELTFTSEVRLRHHMMVTHNRLEGTLPCPHCPKRFVNQLRLKTHMISHSEERPYTCEICGFNLKTKIQLIKHHQNRHSDERPLQCRYCPWRCKQVSALVCHERTHTNERPYSCSVCRQRFKYLGDKNKHERRHESLGGSGFKRIVPGRNIKPKVQEDSSCSDQEQEGLSNAEPQVPEDEYEEQGDQQYEEEQIVKFEEQEIVKFEGQEIAEEYEQVYEQEYEETSREASDAAEVIMHMEDTTVYTEEVTADNIESAEIMADEIMTNEILQSGAVVHLQQEDDSGKIQVIPVMLSLPDLSDANTEVNLATASIMYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00684931;
90% Identity: iTF_00088259; iTF_00089033; iTF_00084753; iTF_00085628; iTF_00087389;
80% Identity: -