Basic Information

Insect: Andrena flavipes
Gene Symbol: -
Assembly: GCA_963971345.1
Location: OZ020481.1:58957354-58966222[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 4.4e-05 0.0055 17.9 1.4 1 23 450 472 450 472 0.96

2 11 0.0026 0.33 12.3 1.6 1 20 478 497 478 500 0.94

3 11 1.1e-05 0.0014 19.8 1.4 1 23 506 528 506 528 0.98

4 11 6.3e-05 0.0079 17.4 4.4 1 21 534 554 534 556 0.95

5 11 8.5e-06 0.0011 20.1 5.6 1 23 562 584 562 584 0.99

6 11 2.1e-05 0.0026 18.9 9.1 1 23 590 612 590 612 0.98

7 11 2.7e-05 0.0034 18.5 7.5 1 23 618 640 618 640 0.98

8 11 0.0013 0.16 13.2 8.8 1 21 646 666 646 668 0.94

9 11 9.9e-06 0.0012 19.9 0.4 1 23 674 696 674 696 0.98

10 11 0.024 3 9.3 4.5 1 23 706 728 706 728 0.98

11 11 3.8e-07 4.8e-05 24.3 1.3 1 23 734 756 734 756 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	4.4e-05	0.0055	17.9	1.4	1	23	450	472	450	472	0.96
2	11	0.0026	0.33	12.3	1.6	1	20	478	497	478	500	0.94
3	11	1.1e-05	0.0014	19.8	1.4	1	23	506	528	506	528	0.98
4	11	6.3e-05	0.0079	17.4	4.4	1	21	534	554	534	556	0.95
5	11	8.5e-06	0.0011	20.1	5.6	1	23	562	584	562	584	0.99
6	11	2.1e-05	0.0026	18.9	9.1	1	23	590	612	590	612	0.98
7	11	2.7e-05	0.0034	18.5	7.5	1	23	618	640	618	640	0.98
8	11	0.0013	0.16	13.2	8.8	1	21	646	666	646	668	0.94
9	11	9.9e-06	0.0012	19.9	0.4	1	23	674	696	674	696	0.98
10	11	0.024	3	9.3	4.5	1	23	706	728	706	728	0.98
11	11	3.8e-07	4.8e-05	24.3	1.3	1	23	734	756	734	756	0.97

Sequence Information

Coding Sequence: ATGAATAGTGAGCAGCATGCATTGCCAGCGACTACGCAGGCACAAGAGGATGTAAACGCGGGTCAAAGTGGTCGTCCTTCGTACCCAGGTGGTTTGACTACTGCAACCAGTCTTGGCAATGTAGCGAATACCCCGCATTCATCCGCGGACCTGCGTGTAGGTACAGCCGTAGCGTTAGCCTCCTCGGTAGCTAAATATTGGGTCCTCACCAATCTGTTTCCTGGACCGCTACCTCAGGTCTCGGTCTATCACCATTCCCACCACAACTCCTCGCACAGGAGTAGTGGAGGTGGAGAGGCATCTTCCAAAGAGCCAGCCTCTTCATTGAACCAAGAAATGGCGTTGACTTCCAGTTCACATCATCAATCGACGCCTAcgcatcatcatcatcaaccTTCAGTTAGCAGTAGCAGCCATCATAGCTCTTTACAACCAAATCCGCAGCAGATCCCAGTGTCGCTGCCAGGCCTTAATCTAGACGGAGCACATATACCTGCAAGCGTTAGTCATTTGCAAGCTGCACATGCACAAATGCAGCAACAAATGCAGGCGCAACAGCTGCatcagcagcagcaacagccaCAGCAGCAGCcccaacagcagcagcagcaacaatcTCACCATCAGATGCAAAATCATCAAAATGCTCAGAACAATGGACCAACTGCACATAATCAAAACGCACAGAGAGATGATAATAAAGTGAAAGATGAGGGTGGAAGTTGCACTACTGAACGTTGTAGCGACAATCAAGTTCATTGCCAAGTCCAGTGTGATCTCCAGCTACAATCATCTCAAGATCTACAACAAAGTCTTAtgcaacagcagcaacaacagcagcagcagcagcagcagcaacaacaaatTGGTGTGAATATAAGTGGAAATTCTTCAGCCGAAGGTGGAAGTCAGAACAATTCAGAGAAGcctgaaaaagaaaaagagctGCGTCAACTGAACATGACACAGTTCCAAGTGCCAGATTTAAAACCAGGAGGTCATATGATGGATGTGAGAACAGCCGACGGTTCAGTTGTAAAAATCAGTGCTGGGAATGAACAAGATTTAGCGAAAACTCTTGGGGTTGAAATGGTGCAAAATATGTATAAGGTGAATGTCGAAGATATTAATCAGCTTCTAGCATATCATGAAGTATTCGGGAAGTTACAAAGTGACATAGCTGCTGGTACAAGCTTAGTTGGAAGCACAGTTCCTACTCAAACAGTTACCACAATACAGAATGGAACACCGATTGTACAGCAAGTTCAATTAAATAAGTTCGATATTAAGTCGAGTGACGGTGAAGCTACACCAGGACCAAGCGCATCGCCAGTATCGGTTGGAAGCCATGCTTGTGAAATATGTGGAAAGATTTTTCAGTTTCGCTATCAGCTTATCGTGCACCGTCGATATCATACGGAAAGAAAACCATTTACATGTCAAGTGTGTGGCAAGGCATTTTTAAATGCGAACGATTTGACTCGCCATGGTAAATGTCACTTAGGTGGATCCATGTTTACTTGTACAGTGTGTTTTCATGTGTTCGCTAATGCACCGTCGTTAGAGCGCCATATGAAGAGACATGCTACCGATAAACCTTACAATTGTACTGTATGCGGAAAGAGTTTCGCGAGAAAGGAACATTTGGATAATCATACTCGTTGCCATACTGGGGAAACGCCCTACAGGTGCCAGTACTGTTCGAAAACATTTACTAGGAAAGAACATATGGTGAATCATGTTCGCAAACACACAGGCGAATCGCCACACCGATGCCACTTCTGCTCCAAGTCATTTACTCGTAAGGAGCATTTGACGAATCATGTGCGAATCCACACCGGcgaatcaccgcacaggtgtGAGTTTTGTCAGAGGACGTTCACTAGGAAAGAACATCTTAATAATCATCTCCGTCAACATACCGGAGATTCATCGCACTGTTGTAACGTGTGTTCAAAGCCGTTTACAAGAAAGGAGCATCTTGTAAATCATATGCGATGTCATACTGGTGAACGTCCATTCGTATGCACAGAATGTGGCAAGAGCTTCCCGTTAAAGGGCAATCTACTTTTCCATATGCGTTCGCACAATAAAGGAAGTAACGCCGAGAGGCCATTCCGTTGCGACCTATGTCCTAAAGACTTCATGTGCAAAGGGCACTTGGTGTCCCACAGACGATCACATTCGGACGAACGGCCCCACAGCTGCCCGGATTGCGGAAAAACATTCGTCGAGAAAGGCAACATGTTGAGACATTTAAGGAAGCATGCGGCAGAAGGGCCACCGACACAAGTCACCACGCCATCAGCCATTCCTCAATCCGGCGTTCTGCCGATACCGGCTGCAGCGGTTCTGGTTGGTCATCCGTTGGCACCGCCAGCACCACCAGTAGTGCCACAACACACGGTTGTCGTGCCCACCCCGCCAGGTGTGTTGACCTCGTACTAA
Protein Sequence: MNSEQHALPATTQAQEDVNAGQSGRPSYPGGLTTATSLGNVANTPHSSADLRVGTAVALASSVAKYWVLTNLFPGPLPQVSVYHHSHHNSSHRSSGGGEASSKEPASSLNQEMALTSSSHHQSTPTHHHHQPSVSSSSHHSSLQPNPQQIPVSLPGLNLDGAHIPASVSHLQAAHAQMQQQMQAQQLHQQQQQPQQQPQQQQQQQSHHQMQNHQNAQNNGPTAHNQNAQRDDNKVKDEGGSCTTERCSDNQVHCQVQCDLQLQSSQDLQQSLMQQQQQQQQQQQQQQQIGVNISGNSSAEGGSQNNSEKPEKEKELRQLNMTQFQVPDLKPGGHMMDVRTADGSVVKISAGNEQDLAKTLGVEMVQNMYKVNVEDINQLLAYHEVFGKLQSDIAAGTSLVGSTVPTQTVTTIQNGTPIVQQVQLNKFDIKSSDGEATPGPSASPVSVGSHACEICGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFLNANDLTRHGKCHLGGSMFTCTVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCSKTFTRKEHMVNHVRKHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQRTFTRKEHLNNHLRQHTGDSSHCCNVCSKPFTRKEHLVNHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSNAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGPPTQVTTPSAIPQSGVLPIPAAAVLVGHPLAPPAPPVVPQHTVVVPTPPGVLTSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01066407;
90% Identity: iTF_01067103;
80% Identity: -