Basic Information

Insect: Andrena flavipes
Gene Symbol: ECU06_1150
Assembly: GCA_963971345.1
Location: OZ020481.1:3630118-3631215[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.00043 0.055 14.7 4.6 1 20 32 51 32 53 0.94

2 9 0.0034 0.43 11.9 1.1 1 23 108 131 108 131 0.92

3 9 0.00029 0.037 15.3 1.5 1 23 163 185 163 185 0.98

4 9 4.4e-06 0.00056 21.0 1.5 1 23 191 214 191 214 0.96

5 9 1.2e-06 0.00015 22.8 0.3 1 23 220 242 220 242 0.98

6 9 4.5e-08 5.6e-06 27.3 1.0 1 23 248 270 248 270 0.99

7 9 6.2e-06 0.00078 20.5 0.7 1 23 276 298 276 298 0.98

8 9 1.7e-06 0.00022 22.3 1.4 1 23 304 326 304 326 0.96

9 9 5.9e-06 0.00074 20.6 1.1 2 23 333 355 332 355 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.00043	0.055	14.7	4.6	1	20	32	51	32	53	0.94
2	9	0.0034	0.43	11.9	1.1	1	23	108	131	108	131	0.92
3	9	0.00029	0.037	15.3	1.5	1	23	163	185	163	185	0.98
4	9	4.4e-06	0.00056	21.0	1.5	1	23	191	214	191	214	0.96
5	9	1.2e-06	0.00015	22.8	0.3	1	23	220	242	220	242	0.98
6	9	4.5e-08	5.6e-06	27.3	1.0	1	23	248	270	248	270	0.99
7	9	6.2e-06	0.00078	20.5	0.7	1	23	276	298	276	298	0.98
8	9	1.7e-06	0.00022	22.3	1.4	1	23	304	326	304	326	0.96
9	9	5.9e-06	0.00074	20.6	1.1	2	23	333	355	332	355	0.96

Sequence Information

Coding Sequence: ATGACAGAAATGATGAGAGCCATGCTATCTCCTAAAGAGTGCTCCAATGAAACTGCATCTTTAGCAAAAACAAGAGCTAGTTCGCCAAAGAAACACACATGCGAGAATTGCCAGCGAACTTTTAAGAGAGAATGCCACTTAATGCGGCACGTGGCCAAATGCAAGACAAAAGCAAGAGATGGTACCAAGACCATTGACGCTCGCTGTAAAGACGAACGCATATCGAGAGATTCCGATAAAAGTAAGGAGGAAAGCGCGAAGAAAGAAGGTAGAAGGAATTGGAGACTGTACCAAACCTGCAAAAGAAAAAGGCATGAAACGCACCCTTGCATGTACTGCGACTACACgagcaagaagaagaagctgTTGGAGATTCACTTAGCGGAGTCGCATCCGGAATTCACACGTAAGAAAGACAAGAAGCTTCGATGCATCGATAGAGAGCTGGTGATGCGTGCTAAGATGGAGGTGGATGGAAAGGTTTATTATCACTGCAACGAATGTGGCAAGAATCTCTACTCGCCGTACACGTTCTACTGGCACGCGCGTATCCACACCGGAGAACGTCCCTACACTTGCCACTTGTGCGGCAAGCAATTTCGCGTGAACCAGGGCCTGGCGAGGCACTTGAGGGACACTCACGCGGGCATCAAGAATTTCCCCTGCGACATCTGCGGCCGAATGTTCACCACGAAACGGAACGCGGAGGATCACAGGCGGATTCATACCGGCGAGCGGCCCTACGTCTGCAACGTTTGCGGGAAATCGTTTAAGCAGAAAGCCTCACTGTTCGTGCACAATCGCACGCACTCGGACGTGTTCCCTTTCAAATGCAACTACTGCGATCAGAGTTTCCGTACGCGGCCGCCGCTCGTCGTTCATATAACGAAGCACACCGGCGAGAAGCCGCACGCGTGCGACATATGCGGCCGTTCGTTCCGCATAAAGTACGAGCTGAAGCGTCACCGTCTGATACACTTCGACGAGAAACCGTGGCAGTGCACCGAGTGCGATCTCTCGTTCCGCCAGAAACGCTACTTAGTTAATCATAAGAGAATTAATCATAACACGAACACACTGGCGACTGCCACCAAGTAA
Protein Sequence: MTEMMRAMLSPKECSNETASLAKTRASSPKKHTCENCQRTFKRECHLMRHVAKCKTKARDGTKTIDARCKDERISRDSDKSKEESAKKEGRRNWRLYQTCKRKRHETHPCMYCDYTSKKKKLLEIHLAESHPEFTRKKDKKLRCIDRELVMRAKMEVDGKVYYHCNECGKNLYSPYTFYWHARIHTGERPYTCHLCGKQFRVNQGLARHLRDTHAGIKNFPCDICGRMFTTKRNAEDHRRIHTGERPYVCNVCGKSFKQKASLFVHNRTHSDVFPFKCNYCDQSFRTRPPLVVHITKHTGEKPHACDICGRSFRIKYELKRHRLIHFDEKPWQCTECDLSFRQKRYLVNHKRINHNTNTLATATK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00762717;
90% Identity: iTF_00084747;
80% Identity: -