Afla004436.1
Basic Information
- Insect
- Andrena flavipes
- Gene Symbol
- -
- Assembly
- GCA_963971345.1
- Location
- OZ020479.1:42897564-42904227[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.1e-08 1.6e-05 25.2 0.0 2 37 12 47 11 55 0.88 2 2 3.6 1.4e+03 -0.2 0.1 29 40 208 219 208 223 0.74
Sequence Information
- Coding Sequence
- ATGACGACAAAGCGAAAATACGGGAAATGGAATGAAGACGAACTACAAAAGGCCATTGTAGCATACGAAAACGGTGACTATGGTTTAAATGAGTGTAGTAGGGTGTATGGAGTGCCAAAAGCCACACTGAAGCGACATTCCGCGAAAAAAACTCATATGCGAATGTTACCCGGACATACAACCCACCGTTTGCAGCCTCTGGACGTAGCGTTTTTCGGTCCATTACAAACGTATTTCATTCAAGCACAAGAAAAGTACCTGAACACGTATAAAGGCCATCAGATTAGGCAAGCTAACATTCCATCTCTCTTAACTGAAGCGTACGGAAAAGCAGCTACTATTGCTAATGCTGAGAGTGCTTTCCGTGCTACAGGAATTTGGCCATTTAATCGACATATTTTTCAAGAACACCACTTTGCTCCTGCTACTGCACTACTTTCGACTGACACTCCCCAGCCATGTTCTTCTGTAACTGAAACTCGAGGAGCATCCATATCTTTGGAAACAGAATCTGACTCAGGAAACAGTGATGACAGCAAAGATGAAAATTTCAAACCACCTGCTAAGTGTTTTAAAAAGACTTTAAAACAGATTTCCCCGTTACCAAAACTAGCACCTGATCCGCAGCCGACACTGTCACGAAGAAGTAAGAGGGAAGCACAAAAGGCAGCTCTATTAACTACTGACTTCTACAGACTGACTCTTCAAGACTCTCAACAAAAACGAATGAAGAAAACGCAACTATTGCCCCACTCCACAgacaaaaagaaaattgttaAAGATAAAAGCTGGTATTGCTTCCTATGTAGCAAAAACAGTGAAGAAGACATGATACGATGTCTTCAATGTCGCACCTGGGTTCATACACGTTGTGCAAATGTGAAACCCACCAAAACAGCGTACTATTGCACTACGTGCACCGCTATGAAGAAATGGAAATGGCTGAAATTGAAGAAGAAAGAGATATGGAATGCCACATTGAAGCAGAGGAAAGTGCACCAACAGTACTGA
- Protein Sequence
- MTTKRKYGKWNEDELQKAIVAYENGDYGLNECSRVYGVPKATLKRHSAKKTHMRMLPGHTTHRLQPLDVAFFGPLQTYFIQAQEKYLNTYKGHQIRQANIPSLLTEAYGKAATIANAESAFRATGIWPFNRHIFQEHHFAPATALLSTDTPQPCSSVTETRGASISLETESDSGNSDDSKDENFKPPAKCFKKTLKQISPLPKLAPDPQPTLSRRSKREAQKAALLTTDFYRLTLQDSQQKRMKKTQLLPHSTDKKKIVKDKSWYCFLCSKNSEEDMIRCLQCRTWVHTRCANVKPTKTAYYCTTCTAMKKWKWLKLKKKEIWNATLKQRKVHQQY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -