Afla022081.1
Basic Information
- Insect
- Andrena flavipes
- Gene Symbol
- -
- Assembly
- GCA_963971345.1
- Location
- OZ020482.1:4206749-4210805[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.1e-10 2.9e-07 30.9 0.0 1 38 12 50 12 57 0.92
Sequence Information
- Coding Sequence
- ATGGCGAAAAAGCATACTACTTATAAAAAGTATACCGAAGAAACTCTAAAACTAGCTCTACAGGATATAACGAATAATAAACTCACTGTGCGTGCTGCCAGCAAAATATATAATGTGCCCTTTTCATCATTACTACTAAAATACAAAACTGACACTGACATGATAAAAAGATCTGGCCCAAAACCGATACTAAGTTCAGACGAGGAGAACTCGTTAATAAAATGGATTCATCATATGAGTGCTACTGGCTTTCCAGTGCACCGTGATTTATTGTTAAACAGTGTTCAAAAATTAGTAATAGATCTGAAACGACAGACACCGTTTATTAATGGAAGACCATCAAAACGATGGTATAAATCCTTTTTAAGTCGACACCCAGAGGTGGCATTAAAATTTGCTCAAAATTTAACGCTCAGAAGAGCTGAGGTGTCTGAAGGTGCTATTCGGAACTGGtttgaagaaattaaaaactatCTACAAACAAAAAATCTTGTAGATATCAATGACTCCAGGATTTACAATTGCGACGAATCGTCCTTTCTATTAAATCCTAAACCTAAGAAAGTTTTAACCCCAAGGACACAAAAAACCACGTATAACAGGATCACTTCTGATGAAAAGGAGTGCTTAACTGTTTTAGTAACAGGAAATGCCGCAGGTCAGCTCGCACCACCTTTGGTGTTATATCCATATGAAAGAATTCCACATAAGATATGTGCGGCTGCGCCGAATGGTTGGTCCTTAGGGCATTCCAAAAATGGATGGATGACCCAGGAAAGCTTCTTTGAATATGTTACCAATACGTTTTATAAGTGGTGCATTCAAATGCATATTGAATttccaattattttatttgttgacGGTCACAGCTCCCACTTGACATTGGCGCTCAGCGATTTTTGtcttgaaaagaaaattgaattgatCGCATTATATCCAAATGCGACACATTTATTGCAACCAATGGATGTGTTTTCTGACTCGTCGATGACAATGCCAGTGGAAATTTTATTAGAGACGAATAATCGCTGGTTCGGGAATTTGTGGTGGATACGGAGCAAACGGCATCAGAAGGACGTTTCAAATGCACAAGGAGATTAA
- Protein Sequence
- MAKKHTTYKKYTEETLKLALQDITNNKLTVRAASKIYNVPFSSLLLKYKTDTDMIKRSGPKPILSSDEENSLIKWIHHMSATGFPVHRDLLLNSVQKLVIDLKRQTPFINGRPSKRWYKSFLSRHPEVALKFAQNLTLRRAEVSEGAIRNWFEEIKNYLQTKNLVDINDSRIYNCDESSFLLNPKPKKVLTPRTQKTTYNRITSDEKECLTVLVTGNAAGQLAPPLVLYPYERIPHKICAAAPNGWSLGHSKNGWMTQESFFEYVTNTFYKWCIQMHIEFPIILFVDGHSSHLTLALSDFCLEKKIELIALYPNATHLLQPMDVFSDSSMTMPVEILLETNNRWFGNLWWIRSKRHQKDVSNAQGD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -