Basic Information

Insect: Andrena camellia
Gene Symbol: -
Assembly: GCA_029448645.1
Location: CM055680.1:29195733-29204592[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00042 0.04 14.8 0.7 2 19 448 465 447 469 0.89

2 17 4.1e-05 0.0039 18.0 4.0 1 23 475 497 475 497 0.98

3 17 0.0033 0.32 12.0 0.1 3 23 505 526 503 526 0.93

4 17 1.2 1.1e+02 4.0 1.2 1 23 533 556 533 556 0.97

5 17 4e-05 0.0039 18.0 0.8 1 23 560 582 560 582 0.97

6 17 0.0031 0.3 12.1 0.4 1 23 588 610 588 610 0.97

7 17 0.00025 0.024 15.5 2.0 1 23 616 638 616 638 0.96

8 17 0.008 0.77 10.8 0.2 1 17 643 659 643 660 0.90

9 17 0.78 74 4.6 1.6 1 23 1237 1260 1237 1260 0.98

10 17 0.00027 0.025 15.5 0.6 1 23 1266 1288 1266 1288 0.97

11 17 0.042 4 8.5 1.4 1 23 1294 1316 1294 1316 0.98

12 17 1.6e-05 0.0016 19.3 0.3 2 23 1323 1344 1322 1344 0.96

13 17 0.1 10 7.3 0.8 2 23 1351 1373 1350 1373 0.95

14 17 7.2e-05 0.0069 17.2 1.6 1 23 1377 1399 1377 1399 0.98

15 17 0.15 14 6.8 1.6 1 23 1404 1426 1404 1426 0.97

16 17 3.1e-07 3e-05 24.7 0.5 1 23 1432 1454 1432 1454 0.98

17 17 0.0039 0.38 11.8 2.5 1 21 1459 1479 1459 1480 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00042	0.04	14.8	0.7	2	19	448	465	447	469	0.89
2	17	4.1e-05	0.0039	18.0	4.0	1	23	475	497	475	497	0.98
3	17	0.0033	0.32	12.0	0.1	3	23	505	526	503	526	0.93
4	17	1.2	1.1e+02	4.0	1.2	1	23	533	556	533	556	0.97
5	17	4e-05	0.0039	18.0	0.8	1	23	560	582	560	582	0.97
6	17	0.0031	0.3	12.1	0.4	1	23	588	610	588	610	0.97
7	17	0.00025	0.024	15.5	2.0	1	23	616	638	616	638	0.96
8	17	0.008	0.77	10.8	0.2	1	17	643	659	643	660	0.90
9	17	0.78	74	4.6	1.6	1	23	1237	1260	1237	1260	0.98
10	17	0.00027	0.025	15.5	0.6	1	23	1266	1288	1266	1288	0.97
11	17	0.042	4	8.5	1.4	1	23	1294	1316	1294	1316	0.98
12	17	1.6e-05	0.0016	19.3	0.3	2	23	1323	1344	1322	1344	0.96
13	17	0.1	10	7.3	0.8	2	23	1351	1373	1350	1373	0.95
14	17	7.2e-05	0.0069	17.2	1.6	1	23	1377	1399	1377	1399	0.98
15	17	0.15	14	6.8	1.6	1	23	1404	1426	1404	1426	0.97
16	17	3.1e-07	3e-05	24.7	0.5	1	23	1432	1454	1432	1454	0.98
17	17	0.0039	0.38	11.8	2.5	1	21	1459	1479	1459	1480	0.94

Sequence Information

Coding Sequence: ATGGAGCTAGGGGAGGGAGAGGCGCAGATTTGTCGACTTTGTGGCCAGTGCGAGAGCATATACATCGACGTATTCGGCGAGGAAGGGACTAAAAGATTTCTGGGCCTGAAGATCCACGCGAAAATCAACATTTTGATAGATGAGAGGGATCCTCTGCCCAAGGCGATCTGTGTTCAGTGTCTGGGCAAGCTCGAATTCGTTTGCGACTTCCAAGAGGAGTGTCTTCGCACCCAACAAGTGTTACGCGATCGATACAATCTACCGCCCTTATCAGAGATTGCTGAGGTAAAGACTGAAGATACAGCACCAAGTACATCAACAAACAATAACAACAATGATACCAACAAAAATCTTAATTCTCCGAGCGACGGGGGTGTTAAGCAAGTAGAGCAACGTGTTTCCAGAACAACCCCGAAACCTCAAAGAAATTTACGAAGCCAACAGCAAGTGAAAAGCAACGAAGAGTCCACTAATGATCAGAATAATCCCGAAACCTTGAACGAAGACGATACAGAAATTATAAACGCTGTCCAAAGTACTGAAACAACTCCCCCGCGATGGCTGAGAAGTAGACAGAATACAGAAACTTCCGCGAATGAAACAGCGTCCGATACACCGATTGCGAATAGGCTTAGAAGTCATGATAATACTGCCACCGAGATAAATGTTAATTCGCCTTGCAATAATTCCAGCGAGACCGTTGAAAAGCCACAAGACCCACGTACCATTCAGATTCCAACTTCAGCTTTAAACAAACTCCTCAGTATCGTATCGAACTCGCCAAACATAGAAGTGTCCGTGAAGGAATCCAGGAATCAAACTAACGATTCCGAGGACATCAGTTTCATCGTAGAATTATGTAAGAAGGAGAGCGAGGACGTTGCCACTGTGCGGGCACGGGTGTTTCCAGACAAAGGCTCGTGCTTGGTGGACAAGGATATTATAGCTCTTCTACAGAACCAGAATTGCGTAGAAATAAATAGTATAATAAACACCATTATCACCAGCAGCGTAAAGAACGGGAACTCGCCGAAGGCGAAGGATTCTACGGAATTCGAGCAGAAATGGCAGGCCTCTCAGAACCCGGAAGAGCTGTTCAAGATCGACGGAGAAGAGATCCGCGTGGACGACAACGTCGAGCATGTTGTGACTGACAGTCAGAATGGTTATGCCTGTAAACTGTGTTGTAAGTTCTACGAGCGCAAGGATAAGTGTATGGTGCACGTGAAGACGCATCTGGGAATCAAACAGTATACTTGTATCCTATGTAATGCCAAATTCGTATGTAAATCCGACGTGATGAAGCACATCCGATGCTCTCACACAAACCCCAGGCCGATACAGTGCCCGAAATGTCCAAAGAGGTTCAAGTCCAAGTTCTATTTGATGGAGCACGATAACGTGCACAAGGGTGTGAGGCCTTATTCTTGCTCGGACTGTGGCCAGAGTTACCATCATAAAGTATCGTTGCAGATTCACATGAAGTCGCATTTACCTCCTCAGAATTTGGCATGCGAGTATTGTGGCAAAATATTCCCGTATCGTACGAGATTGCTGAGCCACGTGGCTAGCGTGCACTTGAAGAACCGTCGGAATTTTAGGTGCCGTTTCTGTTACAATCTCTATTCGAGCCTCGCGGTCCTGAACGAGCACATTAAAACGCGCCACACGACCACGTATACCTGCGACGTCTGCAACAAAACGTTTAAGGTCGCGTCCAAGTATAAGGCTCACGTGCTGCAGCACTCCAATCCGAAGCCCTTCGCGTGCAACATCTGCAACAATAGATACGCGTCTAAAGCATTCCTGAACGAACATCTGCTGAAGCACGAGGGGCTGAGGAAACACATCTGCCAGAATTGTGGTGCGAGATTTGCGCAAGCTAGTCATCTGGCTGCACACCGACACGTGCATGGCGAGAAAACGCACGCCTGCTCGGAGTGCGGGCGAAAGTTCAATAGGCGCGATAACATGAAGATAGAAGAGAATGATGGACTGCCGCAGAATGTTTGTATGCGATGTTTGGGAACATTGGaatttctgtgcgacttctacGAGCAGTGTCACCTCACCCAAAAGGAGTTTATGCAGGCTGGTAAAAATGAGTCGGAGCAGTTCCGAAGAGACAGCGACGCCGAATCCGACAAGGAGAACACCTTCCCATCGACGAACGACGTGAAACGGAAAGCGAAACCCTTGTCGCCTATTCATTCGAAAAGTACAAAAAATGGTTTGACCCTAAAGAATGCGTCGTACTACAAAGCCGCCGAAAGTAAAGATGAAATCAGTAGTCCTCGTTGCCTAGATAACAATGATTGTAGTAATGAAGTTCAGTCAGCTGCGGATAGGACAGTACAAGTAAACAGTAGTCTCGTTCCCAAGAAACAATCCACGTTGGATCATATCGTTGTCCATGGGGAAAAATCGAAGGACGAGGAGCACAGTAGTAGCAGTTTGAAATGCAGAAGAAGTCCGATACCAGAAAAAGTAGACGTTCCAAAGGCGACTGTAATTCGTACCGCGAAATCTGAATCTATGAGCAATTCGATCAATTCAATTTTTAAGAGTATTAGTGACGGTGATATGAAATCAGAGCTCCCTGAACGCCGTAAACGGGGCAGGAAGAGTAAGTTAGAGAAGATGAAAGAAGCTGATTTGTCCTTAGATATAAAAAGGAAGATGCGAAGTAATTTAGATGACAATGAAACTAATGATAATCAGTATAAGAGACATTGCCTGCGTGCAATCTTTACGAATAATAAGTCAAAGACACCTAACAGTGCTGTGATTTCATCCAAAGCCGAAGTCGAGAAAGTAGTAGTAGATACGATGTTGAGCGCTTCTGACGGCAAAAGGAACAAAGATAAGAAGAACAACATTGTGTGCAACAATGGCTCCATATTCGGCAACTCGGTAGAAGCTAACACCAAGGAAGAAGATTTTCtgaagaagaaggaagagaatTCCGTGACGTGCAACGCGATATCGGTTATCGTGAAGCAGGAGAAAGTAGAGACTGAGGATGCACCCTTCCAACGAACTGGTAAATCGAATCAGCTCGTTTGGATCCCTAACGAGATGCTTATACAGGAGTCAGAATGTCGAAGTCGTAAGGTGCAACAGCACACGGAATCATCGCCTGTGGTTCCTTCGTTGAGGAACGAAACGAAACGGACTGAAAGCAGCGAGAGCAATTCCATAGTACAATCTGACCTCTCAGAGGATTCTGACGTTTCCACTAGCATCGATCACGAGGACCTGGGACCAAAAATGTTCGCGAAGCAGAACCGCGTGACTGTTATAAAATCTTCGCAGACCAAAGAAATCAGCATTAAAGAAAAGACAGGGGAGGATTCTGAAAAGTTGAACGTCACAGCGGATGAGATGGATGATAGTGCGCAAGATGATTTGAAATGCGATGCCGCCGAATTGCCGTCGTCGCGACGTCGCAGGCGAAACAGCAGCTTCGTCGAAAGCAAGAGTAGGGATAGATCATTTGGTAAAGTCTCCGAATTGATCAGCGACGAACAGAAGCAAGTTATTGAAACATACTACACGGTTGATATGTCGATGGTCAACTCGAAAGAGGTGCAGAAGAATTTAACGATAATTGATAAGAAGAATATACGTTGCAATATCTGCGGCACGCTTTACCTCAGGATGGATAAGTGTCAGGTGCATATTTGGGGGCACTTACAAATGAAACCATATCAGTGCAAGGCGTGTGACTTCGCGACAGTAACAGTTAGTAATGTTCGTTGTCATATTAGGAAGAGCCACTTGAAGATTAAACCTTTTGCGTGCCACCTTTGCGAAAAGAGATACGTGACCTCGGCCCTACTAGACGAACATATTAATACTCATACAGGTGAACGCCCGTTTAAATGTAAACTCTGCGATTTCGCAAGCGCAAGTAGGCAAATGCTTAGTTACCACACCTCCACTCATAAGCCAATAAAAGACATCAGCTGTCAGATTTGTGGCAAAAAGTTCTACTCAAGAGGCAGATTACGTGCGCACATGATAATACACAATAAAGACAAAGTGGTCATGTGCAAAGTATGCTCCGCCTATTTGTCCAACGCAGAATCGCTGGAAACGCATCATAGGAACTTTCACATGCAGGATTACGTGTGTAACGTCTGTGACAAGCGTGTAAAATCGAGGAAGGCCTTGCATAATCATCAAAATGTTCATGCCGCTGCGAAGCATAAGTGCTCTCTCTGCCCGAATGTGTACAAAAGTAGTCAGATTTTGAAAGAACATCTCTTAAAGCACAAAGGTAttagaaaatacaaatgcaacGTCTGCGAAAAGTCGTTCGGCCAGCAGTCTCATTTAGCTGCTCACATGGCTGTGCACAGTGAGATTAGGTTTCATTGTCCCGCGTGCAACAAAGCTTTCAACCGACACGACAACATGAAGATGCACACTAAACGGTGTAAACCGTTCCGCGCCAATCCAGACCTAAAGGATCTATGGAACAAGAAGATGAAGAGCGTGTCTTTCGATAAGACGGCGGTATTGACCGAAGATTTTAAGAACGGCGATTCGTCGAATTCTGCGTCCCACATTGATGATCCGGACGAGGAATCATCGATgaataatatagacgataaagaAAAGACTGGGATGAACCTCTGTAAATTAGGGCTGAATATATCTTGCATTAAGTCCACGGACCAAGCGTGGAGCCACGATGACGTGTATGCAGATGCGGATGGGATAACGAGATCCGCCGAGATCAGTGTGATTCAGATCCTTCCGGAAAACGAGAATGTAACAATCCTAGAGAATGTTTTGGGACCAGAGAGCTTTTGA
Protein Sequence: MELGEGEAQICRLCGQCESIYIDVFGEEGTKRFLGLKIHAKINILIDERDPLPKAICVQCLGKLEFVCDFQEECLRTQQVLRDRYNLPPLSEIAEVKTEDTAPSTSTNNNNNDTNKNLNSPSDGGVKQVEQRVSRTTPKPQRNLRSQQQVKSNEESTNDQNNPETLNEDDTEIINAVQSTETTPPRWLRSRQNTETSANETASDTPIANRLRSHDNTATEINVNSPCNNSSETVEKPQDPRTIQIPTSALNKLLSIVSNSPNIEVSVKESRNQTNDSEDISFIVELCKKESEDVATVRARVFPDKGSCLVDKDIIALLQNQNCVEINSIINTIITSSVKNGNSPKAKDSTEFEQKWQASQNPEELFKIDGEEIRVDDNVEHVVTDSQNGYACKLCCKFYERKDKCMVHVKTHLGIKQYTCILCNAKFVCKSDVMKHIRCSHTNPRPIQCPKCPKRFKSKFYLMEHDNVHKGVRPYSCSDCGQSYHHKVSLQIHMKSHLPPQNLACEYCGKIFPYRTRLLSHVASVHLKNRRNFRCRFCYNLYSSLAVLNEHIKTRHTTTYTCDVCNKTFKVASKYKAHVLQHSNPKPFACNICNNRYASKAFLNEHLLKHEGLRKHICQNCGARFAQASHLAAHRHVHGEKTHACSECGRKFNRRDNMKIEENDGLPQNVCMRCLGTLEFLCDFYEQCHLTQKEFMQAGKNESEQFRRDSDAESDKENTFPSTNDVKRKAKPLSPIHSKSTKNGLTLKNASYYKAAESKDEISSPRCLDNNDCSNEVQSAADRTVQVNSSLVPKKQSTLDHIVVHGEKSKDEEHSSSSLKCRRSPIPEKVDVPKATVIRTAKSESMSNSINSIFKSISDGDMKSELPERRKRGRKSKLEKMKEADLSLDIKRKMRSNLDDNETNDNQYKRHCLRAIFTNNKSKTPNSAVISSKAEVEKVVVDTMLSASDGKRNKDKKNNIVCNNGSIFGNSVEANTKEEDFLKKKEENSVTCNAISVIVKQEKVETEDAPFQRTGKSNQLVWIPNEMLIQESECRSRKVQQHTESSPVVPSLRNETKRTESSESNSIVQSDLSEDSDVSTSIDHEDLGPKMFAKQNRVTVIKSSQTKEISIKEKTGEDSEKLNVTADEMDDSAQDDLKCDAAELPSSRRRRRNSSFVESKSRDRSFGKVSELISDEQKQVIETYYTVDMSMVNSKEVQKNLTIIDKKNIRCNICGTLYLRMDKCQVHIWGHLQMKPYQCKACDFATVTVSNVRCHIRKSHLKIKPFACHLCEKRYVTSALLDEHINTHTGERPFKCKLCDFASASRQMLSYHTSTHKPIKDISCQICGKKFYSRGRLRAHMIIHNKDKVVMCKVCSAYLSNAESLETHHRNFHMQDYVCNVCDKRVKSRKALHNHQNVHAAAKHKCSLCPNVYKSSQILKEHLLKHKGIRKYKCNVCEKSFGQQSHLAAHMAVHSEIRFHCPACNKAFNRHDNMKMHTKRCKPFRANPDLKDLWNKKMKSVSFDKTAVLTEDFKNGDSSNSASHIDDPDEESSMNNIDDKEKTGMNLCKLGLNISCIKSTDQAWSHDDVYADADGITRSAEISVIQILPENENVTILENVLGPESF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00089032;
90% Identity: iTF_00089032;
80% Identity: -