Basic Information

Gene Symbol
CSRNP3_1
Assembly
GCA_029448645.1
Location
CM055678.1:18426355-18430985[-]

Transcription Factor Domain

TF Family
CSRNP_N
Domain
CSRNP_N domain
PFAM
PF16019
TF Group
Unclassified Structure
Description
This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.25 6.4e+03 -2.7 0.6 64 93 469 495 451 532 0.42
2 2 4.2e-101 1.1e-96 323.5 7.5 1 218 778 988 778 988 0.92

Sequence Information

Coding Sequence
ATGGAATCGCCTTCGGCCCAGCAGCGCATCGTCGAGGCCCAGGAGCGCGTTATCCAGGCCCAGGAGCGCGTCGCCGAGGCCCAGGAGCGTGTTGCCGAGGCCCAGGTGCGCCTTGTCGAGGCCCAGGAACATCTTGTCGAGGTCCAGGAGGATTCCAGCGCGGTAGGATCGCCGGGGACGGTGACCGCGCCGTCGTCGGCGACATCAGCCGCAGAGGTTATTGCCGGGGAGGTGGATAACGACGCCTCTCCCACGGCCGATTCCCAAGGAATGCACGATGTTAGCCGTCAGGCTGCCGACGACCAGGGATTCGTCAGCCTAGGACCGTGCCAGGCTTCGGTCGCCTCCTCCGAGGCACCCTCTGCTCGAGAAGACGCCCAGGACTCGCTGGACATGGGACTCAAGTTGGGAAAAGGCGTCGGGCAACCAGCCGAAGACGCGGGAACGGAAGTGAAGCCGAGCGACCAGCTCGATGATCAGCTAGGAGACTGTTGCGAGGCAACGTCCACGCCGATTGAGTGCGTCGATAAAAGCGAGGACAAACTCGTCGCTGGCGTCGGTTTCATCGGTGTATCGCCACTGTCCAGGAAGAGGCCAGCCAGCGACTTCTTGCCTATCAGCGCCGAGATCAAGAGAATCGGCGTGGAGATCCCTGAGATCGAGGCGAATCAATTGAGGAGCGACGTGAGGAGGATCTCGCCGGTGCTGGTGAGCCTTCGAGAGCGAACACTTGGCGAAATATCCCTGTCCTCGGACTCGTGTCTGTTCGACGACGACTCTGCCAATGGCCGGTGCATCTCGAGGAACAGTAGGATCCTCGATGGTTCGTTGACGAGCGCCTGTAGACTGAAGGCGAACGCGAGCCTCGACAATTCCATGCACACGAACGAGGCGATGGACCCTGAGACGGAGCGCAGGGTTCGCGGTGCTGGTACGTCGGATGGTGAACGCGCGGGCAATCCCGAGGAGGTGATAGACTGCCATAGGAAGCTCGAGTACGCGGACGATGTGTTCATAGACGAGAACTCCTGTTGCTCCCTGCCACGGGAGAGCCCCGAGAGGGACCTCGATCCGCGCCAGGAGAAACAGTGCGAGGAGCCGGTCGAACCGAGCACGTGCAATGAGAGCTCGCCACACGCGGACGACGCTTGCACTACCGCGAAGACGTCCGAGGAGACGGGCAGCCCGGTGCAGAACGCGTTGTGTCCCCATGTAGTCGTGATGCTGGAGCGCATCGAATCGCCCGGTGATCTGACACCGGAAAGAAAAGACAAGAGGCCGATCGCCAAAAGGAAGCTGAAGAAGATCGCGGTGTGCGACGACGGTGCTAGCGACGTGGATGCCGGGAGCGAGCTCGCGGAATCGCCCAGGACGTCGCGCCTCGTCCAAAGGTGCGCTTACAAGAAGAAGAACGCCCAAAAGACTGAGCCGGAGGATCATTCGAAGAAGGACTTGCCCTCTGCCGCAGAGTCCAGACAGGAAACGACTCACGTTGAAGAGCAAGCGAAATCTGCTCACTCTATCATGGAGTGCAAAGTGATGTTGGAGAGGGTGGCGTCGCCGAAATCACCGAGGCCGACAGTCAAAGAATCAGGCAAGGAAGAAGAAGCGGTGCCTGGTGTCTCTACGGGGAAGCTGGACCAGGATCAGAAGACCATATTTCCATCGTCGTTGCCCTCCGCGGAGAATGTACAGCCGTTGAACAATATGGATTCGTCTGAGGCGAGACCCAGCTCGCTAGCGGAGACGTTGGAACCTTCCATCGATGCTCCAGAAGCAATAGACACGGAGACGGAGACCGAGACTGGGTCCGACAGCTCCGAAATGTCGTCCATGGCGAACGTTCGCATTCGAAGCTGCGACGACGACGCCGTCTCCGACCAAATATCATGCCCAGAGAGCGAATCCATGTGCTGCGTCGACATCAATCCGGAGATCATCACCAGGTTGGAGACTGAGAGGCCGGAGGCCTTCACTGAAGACTCGGCGGAGAGTCTGGCGCTTGCTACCGGTGCTAGGGACGAGGTCAGGTCGGATGGAAGCGATTCTGGCCTGGGAAGCGAGATACCTGGGGACTCCGGGCCTGCGCCTGCTCCAGAGAGCGATTCGGAGACTTCTTTCTTGGATAGGATACCCGACGATATTCTCTCCGACAAGGAAAAAGCCGTCAATCAATTAGACACATTCGTGCCCAACCCTGTTGTCCCTGGTACGCCACAGCCGCCGTTGGCTAGTTTCCCTACTCCCCCGAAGAGTAACCTGAAGAGAAGATTGACCGACTGCATGGAAGGTGCTCCTACCCCAAAGAGAAGCAACACGGACGAGGCGATGAAGAAGAAGCGCAATATCCAGTTCGATGCCGTCACCGTGTACTACTTCCCCAGGGCGCAGGGCTTCACCTGCGTGCCTTCTCAGGGTGGCAGCACCCTTGGCATGAGCGCGACGCACACCCACGCCGAAAGGTTCTCGTTATCGGAACACGCAGCGGAGCAAAGGCGAATCCATCGTGCCAGACTGGCCCAGTTGCGTTCAGAACGTGCTGCAAATTGCGTGGCTGAGGCGGCTTCCAGCTCGGAGGATCCCAGCGACGACACGGACGAGGAACCCAGCGACACAGAGGAGCTGGACATCGACAGTTACTATTTCCTGCAGCCGGTGCCCACGTGGCAGAGACGAGCCCTACTGAGAGCAGCAGGAGTGCGCAGAATAGACGCCGTCGAGAAGGACGAGTGTCGCGACATCAGAGCCAGCAGAGAACACTGCGGCTGTGGGTGCAAAGGTTACTGCGACCCCGAGAGCTGTCCCTGCAGTCGCGCTAACGTCAAGTGCCAGGTGGATCGGGCGGGTTTTCCGTGTGGGTGTACACGGGATGGCTGCGCGAACAGTTCAGGCAGGATCGAGTTCAATCCTGTACGAGTGCGGACGCACTTCATCCACACTCTGATGCGGTTAGAGCTGGAGAAGAAGCAACGGGAGGAGGAGGGCGCGGATCACGACGCTTCCGACAATCAGAACGGTAGAAGCCCCTTAAGGGAGATCAATCTGGGGTCCGTGATGGAGAACAGGAATGCCCAGTCATGCCTGAACGGCGGCGGTTTCACGACGCTGCATTACGAGAATCACGAGGCGGTGGACGGCGGGTCGAATTGCCAGCCAGAAGCGCCCGGCACTAGGGAAGATAGCCTGGATCTATACGCGATCAGAGACGATTGTTACCCTAGCGAAGACACCGTTGATGGTACGCAGGGGCCTCAAAGGAAGTTGCATCCTGAATTTAGTCAAGCGTTCCAAACGTTCTCGGGGCAAaccggcgccggcgtgaacttCCAACAGCCCGCTTATCAGGACTACCAACCTTACGCTAACCTTCCTTCCACGTCTAGGGTGCAATTCCAGCCACAGTTCCAGCCGGTGCCAGGGAACGCAGGGTTCACCCACTACGCGCCTTATGGGCAGGATAATGGATCGATTCCGGGGAACTGCCAGGTACACCCTGGGCAGCATGCTTCCAGCTACGAGGCCAGTTTCGCCCAGGACGAAACCACCGGATCCCAGTACACGAACTTGAATTCGGTGCAGCCGATGAACACGGCCCAGCAGATTGGTAAGCTGGAGCCGTTCTCGGAGCTTCTGTCCGCCAGATACTCGTATTACGGCGAGATCGAGCCGCAGGCGCATGGTACTTATCACGGGAACGGGGCGAAGGTCGAGGCGGAGAAGGGCCAAGGGAACGAGCAACAGTCGGAGAGCACGGAAGAGTGCGACGAGAACTTCGGCGAGATCATCAAGAAATCGATGGTCGAGACAGTATCCGCTTAG
Protein Sequence
MESPSAQQRIVEAQERVIQAQERVAEAQERVAEAQVRLVEAQEHLVEVQEDSSAVGSPGTVTAPSSATSAAEVIAGEVDNDASPTADSQGMHDVSRQAADDQGFVSLGPCQASVASSEAPSAREDAQDSLDMGLKLGKGVGQPAEDAGTEVKPSDQLDDQLGDCCEATSTPIECVDKSEDKLVAGVGFIGVSPLSRKRPASDFLPISAEIKRIGVEIPEIEANQLRSDVRRISPVLVSLRERTLGEISLSSDSCLFDDDSANGRCISRNSRILDGSLTSACRLKANASLDNSMHTNEAMDPETERRVRGAGTSDGERAGNPEEVIDCHRKLEYADDVFIDENSCCSLPRESPERDLDPRQEKQCEEPVEPSTCNESSPHADDACTTAKTSEETGSPVQNALCPHVVVMLERIESPGDLTPERKDKRPIAKRKLKKIAVCDDGASDVDAGSELAESPRTSRLVQRCAYKKKNAQKTEPEDHSKKDLPSAAESRQETTHVEEQAKSAHSIMECKVMLERVASPKSPRPTVKESGKEEEAVPGVSTGKLDQDQKTIFPSSLPSAENVQPLNNMDSSEARPSSLAETLEPSIDAPEAIDTETETETGSDSSEMSSMANVRIRSCDDDAVSDQISCPESESMCCVDINPEIITRLETERPEAFTEDSAESLALATGARDEVRSDGSDSGLGSEIPGDSGPAPAPESDSETSFLDRIPDDILSDKEKAVNQLDTFVPNPVVPGTPQPPLASFPTPPKSNLKRRLTDCMEGAPTPKRSNTDEAMKKKRNIQFDAVTVYYFPRAQGFTCVPSQGGSTLGMSATHTHAERFSLSEHAAEQRRIHRARLAQLRSERAANCVAEAASSSEDPSDDTDEEPSDTEELDIDSYYFLQPVPTWQRRALLRAAGVRRIDAVEKDECRDIRASREHCGCGCKGYCDPESCPCSRANVKCQVDRAGFPCGCTRDGCANSSGRIEFNPVRVRTHFIHTLMRLELEKKQREEEGADHDASDNQNGRSPLREINLGSVMENRNAQSCLNGGGFTTLHYENHEAVDGGSNCQPEAPGTREDSLDLYAIRDDCYPSEDTVDGTQGPQRKLHPEFSQAFQTFSGQTGAGVNFQQPAYQDYQPYANLPSTSRVQFQPQFQPVPGNAGFTHYAPYGQDNGSIPGNCQVHPGQHASSYEASFAQDETTGSQYTNLNSVQPMNTAQQIGKLEPFSELLSARYSYYGEIEPQAHGTYHGNGAKVEAEKGQGNEQQSESTEECDENFGEIIKKSMVETVSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00084544;
90% Identity
iTF_00084544;
80% Identity
-