Acam007572.1
Basic Information
- Insect
- Andrena camellia
- Gene Symbol
- -
- Assembly
- GCA_029448645.1
- Location
- CM055677.1:41850168-41852021[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-08 9.2e-06 25.7 0.0 2 42 12 52 11 55 0.91 2 2 1.3 3.3e+02 1.5 0.1 29 40 465 476 465 480 0.75
Sequence Information
- Coding Sequence
- ATGACGAAAAAGCGAAAATACGGGAAATGGAATGAAGACGAACTACAAAAGGCCATTGTTGCATACGAAAACGGTGACTATGGTTTAAATGAGTGTAGTAGGGTGTATGGAGTGCCAAAAGCTACACTGGAGCGACATTCCGCGAAAAAAAACTCATATGCGAATGGTATAAAGGCTCTGGGGAAGCCAACCACGTTCTCTTTAAATATGGAGAAGAGTTTATCGAACCACATTCTAACATTAGAAGAATGCTTTTTTGGATTAACAATTAAAGATGTGCGAAAACTCGCATTTGATCTAGCGGAAAAATATAACCTTCCCCATGCATTCAATAGGGAGAAAAAGATGGCAGGGAAAAAATGGTTTTACGCATTTGTGCGGCGAAATCCTCGACTATCTATTCGACAACCAGAGGCTACTTCACTTGCAAGAGTAAAAGGATTCAATAAAGAGAATGTGCAACACTTTTTTGATTTATTAGAAAGCtgtattacaaaatttaatctTACACCAGACAGGATTTTTAACGTAGATGAATCTGGGTTTTCCACTGTGCAGAAAAGGACACAAAAAATAGTGGCAAAAAAAGGGAAGCATCAAGTAGGCGTTGTTGCAAGTGGCGAACAAGGGGTAAACACCACAATGGTCTGTGCAGTAAGTGCTGCAGGTGTTTACATACCACCAATGATAATTTTTAAGGCAAAAAAGTGGAACGACGCATATGAGATTGATGCTCCTACAGGAAGCATTATTAAAATATCAGATACAGGCTACATTAATACTGAACTGTTTGTAACATGGCTGAAACATTTTAAGAATTACACAACttgcaataaaaataaaaaaattcttctgttgtTGGATGGGCACACCACGCATAGTAAAAACCTAGAAGCTCTGACTTTTGGAGCAGAAAACGGTATTGAATTGCTACAGTTACCCGGACATACAACCCACCGTTTGCAGCCTCTAGACGTAGCGTTTTTCGGTCCATTACAAACGTATTTCATTCAAGCACAAGAAAAGTACCTGAACACGTATAAAGGCCATCAGATTAGGCAAACTAACATTCCATCTCTCTTAACTGAAGCGTACGGAAAAGCAGCTACTATTGCTAATGCTGAGAGTGCTTTCCGTGCTACAGGAATTTGGCCATTTAATCGACATATTTTTCAAGAACACCACTTTGCTCCTGTTACTGCACTACTTTCGACTGACACTCCCCAGCCATGTTCTTCTGTAACTGAAACTCGAGGAGCATCCATATCTTTGGAAACAGAATCTGACTCAGGAAACAGTGATGACAGCAAAGATGAAAATTTCAAACCATCTGCTAAGTGTTTTAAAAAGACTTTAAAACAGATTTCCCCGTTACCAAAACTAGCACCTGATCCGCAGTCGACGCTGTCACGAAGAAGCAAGAGGGGAGCACAAAAGGCAGCTCTATTAACTACTGACTCCTACAGACTGACTCTTCAAGACTCTCAACAAAAACGAATGAAGCAAACGCAACTATTGCCCCACTCCACagacagaaagaaaaatgttaaagataACAGCTGGTATTGCTTCCTATGTAGCAAAAACAGTGAAGAAGACATGATACGATGTCTTCAATGTCGCACCTGGGTTCATACACGTTGTGCAAATGTGAAACCCACCAAAACAGCGTACTATTGCACTACGTGCACCGAGCGGTCCAACGTAGGAAACCGGTGGTCCAACTTACGAAACCGGTTGCCTGAAATGGACCGAAGTCATTAG
- Protein Sequence
- MTKKRKYGKWNEDELQKAIVAYENGDYGLNECSRVYGVPKATLERHSAKKNSYANGIKALGKPTTFSLNMEKSLSNHILTLEECFFGLTIKDVRKLAFDLAEKYNLPHAFNREKKMAGKKWFYAFVRRNPRLSIRQPEATSLARVKGFNKENVQHFFDLLESCITKFNLTPDRIFNVDESGFSTVQKRTQKIVAKKGKHQVGVVASGEQGVNTTMVCAVSAAGVYIPPMIIFKAKKWNDAYEIDAPTGSIIKISDTGYINTELFVTWLKHFKNYTTCNKNKKILLLLDGHTTHSKNLEALTFGAENGIELLQLPGHTTHRLQPLDVAFFGPLQTYFIQAQEKYLNTYKGHQIRQTNIPSLLTEAYGKAATIANAESAFRATGIWPFNRHIFQEHHFAPVTALLSTDTPQPCSSVTETRGASISLETESDSGNSDDSKDENFKPSAKCFKKTLKQISPLPKLAPDPQSTLSRRSKRGAQKAALLTTDSYRLTLQDSQQKRMKQTQLLPHSTDRKKNVKDNSWYCFLCSKNSEEDMIRCLQCRTWVHTRCANVKPTKTAYYCTTCTERSNVGNRWSNLRNRLPEMDRSH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00085263; iTF_00085264;
- 90% Identity
- iTF_00085263; iTF_00085264;
- 80% Identity
- -