Acam005275.1
Basic Information
- Insect
- Andrena camellia
- Gene Symbol
- -
- Assembly
- GCA_029448645.1
- Location
- CM055677.1:6102456-6103316[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7e-09 1.8e-06 28.0 0.0 1 38 59 95 59 98 0.92 2 2 6.7 1.8e+03 -0.8 0.0 16 23 180 188 175 190 0.77
Sequence Information
- Coding Sequence
- ATGGTAGATACTAGGAACAGCAATAAAACCAAAGCAGTTAGGACAGaggttaaaaaaaatctcaacagtGCTGTGAAGAGAAGCGCTAACACTCTTAAGCTTGAAAAGAAGCCTACGGTCTTAGTGAGTACGTTAAATAGTgctaaaaagaagaaaactaAGAGAATCAAGTATTCTCCCGAACATCTCCAGAATGCTATTAAGCTACTGGATACAGGCATTTCCCTAAGAAAAGCTGCCAATGCATTTGGCATTCCTGTAACTACTTTAACAAGAATGAAAAACAATCCTGGTATAATAAAAAGGAGAACTGGACCAGCAACTATTTTATCAGAAGCTGAAGAACGAGAAATTATTAATGGGAtattatataaagcagaaagaggTTATCCAGTTACCAAAACAGAACTGTTAGATTCTGTACAAAAGTACATAGAATCGTTAAAGAGGGATACTCCCTTTATTGAAAATCGTCCAGGTCGTCATTGGTACGAAGGATTTAGAAAACGTCATCCAAATTTGTCCATTAGAACAGTACAACATTTAAGTTTAAGTAGAGCTGCTGTTACAAGAGAAGATTTAAGAGAGTGGTTCAACGTGCAAAGAAGCTatttaaatagtaaaaatatGCTGAGCATTTTTTCAAATGGGATTTTTAATTGCGACGAAACGAACATTTTATTGTGCCCTGATTCTGAAAAAGTTTTAACACAGAAAGGTTGTCGCTCAGCGTACAAAATCGCAGATGCTGGGAAAGAAAGTTTCACTGTTCTTTTCATGTACAATGCAGCAGGTACTCGTGCCCCGCCAATGCTAATGTTTCCTTACATATGTAGAAAGTGTACCccaaaaaattgttga
- Protein Sequence
- MVDTRNSNKTKAVRTEVKKNLNSAVKRSANTLKLEKKPTVLVSTLNSAKKKKTKRIKYSPEHLQNAIKLLDTGISLRKAANAFGIPVTTLTRMKNNPGIIKRRTGPATILSEAEEREIINGILYKAERGYPVTKTELLDSVQKYIESLKRDTPFIENRPGRHWYEGFRKRHPNLSIRTVQHLSLSRAAVTREDLREWFNVQRSYLNSKNMLSIFSNGIFNCDETNILLCPDSEKVLTQKGCRSAYKIADAGKESFTVLFMYNAAGTRAPPMLMFPYICRKCTPKNC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -