Acam011097.1
Basic Information
- Insect
- Andrena camellia
- Gene Symbol
- -
- Assembly
- GCA_029448645.1
- Location
- CM055678.1:34854512-34855651[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.9e-09 1.3e-06 28.5 0.0 1 38 59 95 59 98 0.93 2 2 9.3 2.4e+03 -1.2 0.0 16 23 180 188 175 190 0.77
Sequence Information
- Coding Sequence
- ATGGTAGATACTAGGAACAGCAATAAAACCAAAGCAGATAGGACAGaggttaaaaaaaatctcaacagtGCTGTGAAGAGAAGCGCAAACACTCTTAAGCTTAACAAGAAGCTTACAGTCTTAGTGAGTACGTTAAATAGTgctaaaaagaagaaaactaGGAAAATCAAGTATTCTCCTGAACATCTCCAGAATGCTATTGAGCTACTGGATACAGGCATTTCCCTAAGAAAAGCTGCCAATGCATTTGGCATTCCTGTAACCACTTTAGCAAGAATGAAAAACAATCCTGGTATAATAAAAAGGAGAACTGGACCAGCAACTATTTTATCAGAAGCTGACgaacgagaaattgttaattggatattatataaagcagaaagaggTTATCCAGTTACCAAAACAGAGCTGTTAGATTCTGTACAAAAGTACATAGAATCGTTAAAGAGGGATACTCCCTTTATTGAAAACCGTCCAGGTCGTCATTGGTACGAAGGATTTAGAAAACGTCATCCAAATTTGTCCATTAGAACAGTACAACATTTAAGTTTAAGTAGAGCTGCTGTTACAAGAGAAGATTTAAGAGAGTGGTTCAACGTGCAAGGAagctatttaaatattaaaaatatgctGAACATTTCTCCAAATAGGATTTTTAATTGCGACGAAACGAACATTTTATTGTGCCCTGATTCTGAAAAAGTTTTAACACAGAAAGGATGTCGCTCAGCGTACAAAATCGCAGATGCTGGGAAAGAAAGTTTCACTGTTCTTTTCATGTACAATGCAGCAGGTACTCGTGGCCCGCCAATGCTAATGTTTCCTTACATAGAAAGTGTacccaaaaaaattattgaaaatacACCAAAGGGCTGGGGCATCGGCATATCGGAAAGTGGATGGATGACTACGGAAACATTCTATGAATATGTGACAAATGTGTTTTACGCAAGGCTCTTAAGAGGAAATTTACAGTTTCCAGTAATAATATATTTAGACAATCATGCTTCACATGTAACTATACCATTAGTCTCCTTCTGTCGAAACAAGCAGATTGAGATTATCGCACTTCATCCCAATTCTACGCACATAATGCAACCTCTGGACATAGCCTTTTTCCACCCTTTTAAAGAAATGTAG
- Protein Sequence
- MVDTRNSNKTKADRTEVKKNLNSAVKRSANTLKLNKKLTVLVSTLNSAKKKKTRKIKYSPEHLQNAIELLDTGISLRKAANAFGIPVTTLARMKNNPGIIKRRTGPATILSEADEREIVNWILYKAERGYPVTKTELLDSVQKYIESLKRDTPFIENRPGRHWYEGFRKRHPNLSIRTVQHLSLSRAAVTREDLREWFNVQGSYLNIKNMLNISPNRIFNCDETNILLCPDSEKVLTQKGCRSAYKIADAGKESFTVLFMYNAAGTRGPPMLMFPYIESVPKKIIENTPKGWGIGISESGWMTTETFYEYVTNVFYARLLRGNLQFPVIIYLDNHASHVTIPLVSFCRNKQIEIIALHPNSTHIMQPLDIAFFHPFKEM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -