Acam008774.1
Basic Information
- Insect
- Andrena camellia
- Gene Symbol
- -
- Assembly
- GCA_029448645.1
- Location
- CM055678.1:599131-599997[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-09 6.1e-07 29.5 0.0 2 38 16 52 15 55 0.93 2 2 5.7 1.5e+03 -0.5 0.0 29 43 244 258 242 260 0.86
Sequence Information
- Coding Sequence
- ATGCCTAATAACTATAAACGGATTTCGACACGACATAAATGGTCCAAAGAAGATATGGCCATGGCCATAGAAGCTGTCAAAGGGAAGAAGATGGGACGGCTCCAAGCATCCAAGAAGTTTAATGTACCACAGGCAACACTTCGCCGTCATTTCGCAGGAGTTCCTATAAATCTTGGTCGCTTCAAGCCAACCTTTCACCCAGAAGTAGAAAAAGATTTGGTAGACCATGTTCTTCattttgaaagcagatgttttggGTTTACCACCAGtgacataagaaaattggcttACCAACTGACAGAAAGGATAAACTTGGACGACAGATTTGACAAGTCTAGTCAAATGGCCGGTTGGGATTGGCTGAAAGGGTTTAGAGAGCGCAATCCCAATATCTCACTGAGAAGTCTTGAACCGACGTCAGCTGCAAGAGCGGGGGCGTTCAATAAGCCTCAAGTAATGAAATTTTTCAAGCTTTTAGAAAAGTTGGTGACTGACGAAAACATTTCACCACACCGGATTTACAACATGGACGAGTCTGGTCTTAGCACCGTTCAAAAGCCTCCAAAAATATTTGCTCTCAAGGGAAAGAAGCAAGTTGATGCTCTAACTAGTGCCAAGCGTGGTGAACATGTCTCAGTGGCTGTTTGTGCTAATGCCACTGGGAATTTCGTTCCATCTGCACTAATAATACCGAGAAAAAATCACAAAGCAGAATATTTTGATGGTGCACCGTCAGGCACGTTGGAGCTGTGCTATGATAGAGGGTACATGGTGGGTGAACTGTTTCTCAGATGGATGAAGCATTTCGTTAGCTTCGTTGCTTCTATTCCAACAAACAAAGTTCATTTGCGAATTGTGCACCAATAA
- Protein Sequence
- MPNNYKRISTRHKWSKEDMAMAIEAVKGKKMGRLQASKKFNVPQATLRRHFAGVPINLGRFKPTFHPEVEKDLVDHVLHFESRCFGFTTSDIRKLAYQLTERINLDDRFDKSSQMAGWDWLKGFRERNPNISLRSLEPTSAARAGAFNKPQVMKFFKLLEKLVTDENISPHRIYNMDESGLSTVQKPPKIFALKGKKQVDALTSAKRGEHVSVAVCANATGNFVPSALIIPRKNHKAEYFDGAPSGTLELCYDRGYMVGELFLRWMKHFVSFVASIPTNKVHLRIVHQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00087871;
- 90% Identity
- -
- 80% Identity
- -