Acam009430.1
Basic Information
- Insect
- Andrena camellia
- Gene Symbol
- -
- Assembly
- GCA_029448645.1
- Location
- CM055678.1:7212123-7213890[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-13 4.1e-11 42.9 0.0 3 40 17 55 15 58 0.91
Sequence Information
- Coding Sequence
- ATGCCACGTACATATAAAAGAATTTCGAAGAAGGCAGAATGGAACCAGGAAAATTTATCAAAGGCCATGGAGGTAATTAGTAAGAATAAAATATCCATACGCAAGGCAGCACAATTGTTTGGAATACCATATTCTACTCTTCAAGAAAGAATTAAAAAAGGTTCTAATGTTGCTACAAAAATTGGAAGAAAAACAGATATTCCAACAGATTTAGAAATCCAGTTAGCAGAAAGAGTGAAACTACtgggaaaaatattttatggTGTAAGTGCTCTTCAAATGAGAAAGAATGCATTTCGGTTTGCCGAAGAATGTAATGTAAATCACCGTTTTAACAAAGTGCATAGAATGGCTGGTAAAGACTGGCTTGCTGGTTTCTTGACAAGACACAATATCAGTGTACGAAAACCAGAAGCTATTAGTATTAACAGAATTACTGGATTTAATCGAGAGGAGGTTGGCcgtttttttaacaatttacatgacatgagacaaaaatattcatttcaagCTGGCAATATCTGGAATATGGACGAAACGGGAATTTCAACAGTCCAAGATCCAGGCATGGTATTAGCAACTACTGGACAGTGTCGAGTTGGTTCCCTCACAAGTtgggaaagaggaaaaaatataaCAGTTGTCTGTGCCATGAGTGTTGCTGGGCAGTATTGTCCACCATTGTTTATTTTCCCGAGAAAACGCATGTCCATCGAGCTTCAAAGAAATGGGCTTCCTGGAGCAAGTTACAATTGCTCAAAATCAGGATGGATCACTGAGGAATTGTTTGTCCACTGGCTAGAacattttatacaatttacAAAGCCCAGTGATGATAGAAAAGTTTTATTAGTGTTGGACAATCATTTATCCCACTGCACAATTGAAGCCTATGAATTATGTCGAAAGCACAATATTGTAATGTTGTCTTTACCACCTCACTGCTCGCATAGAATGCAACCCCTAGACGTCTCGTATTTTGGACCATTAAAGAAACGATTTAAATATGAATGTGATGTCTATATGAAAAGTAAATGTTTGGAAAAAATCACTCCTTATATAATTGCGGAGTTATTTGGAAAAGCATATGCAGAAGTTGCGAGTATGACGAAAAGCATTGAAGGTTTTCGAGCTACAGGCATAGAACCTTTAAACAGATTTATATTCACTGATGAAGATTTTCTTCCTGAAACCTTGTTGAACCCACCTCTCCCACTATCACCATTAGCAGGATCTTCAACATTATCATCAACTACAATTCCTTCAACATTATCACCAATAGTAGGACCATCCACAACATCACCTCCACTTGCTACTTTATTGTCAGATATATTACCAATTCCGAAACCTCAAACAACCTGtgacataaagaagaaaagctcCAGAAAACAATACTCCCAAATACTGACGTTAACACCCATGAAAGAAGTGCTTAAATTAAAGCAGGAGAGAAAACTGACGCTTCTAAATCGAAACACCAAAAATGGAGGTAAAAAAAACCtgagaaaaaagaaactgaatttTCAATCGGACAATTCTGATATTTCTGACGAAAATGTAGTGCACGATATTTGCTCCTTTTGCAAAGAATTTGGAAAAGGTGATGAAATGTGGTTCCGGTGCACCGTATGTGGCCAATGGGCACATGAAGAATGTTCAGGATGGGATACCCCTGAAGAATATATTTGTGATATATGtactaattaa
- Protein Sequence
- MPRTYKRISKKAEWNQENLSKAMEVISKNKISIRKAAQLFGIPYSTLQERIKKGSNVATKIGRKTDIPTDLEIQLAERVKLLGKIFYGVSALQMRKNAFRFAEECNVNHRFNKVHRMAGKDWLAGFLTRHNISVRKPEAISINRITGFNREEVGRFFNNLHDMRQKYSFQAGNIWNMDETGISTVQDPGMVLATTGQCRVGSLTSWERGKNITVVCAMSVAGQYCPPLFIFPRKRMSIELQRNGLPGASYNCSKSGWITEELFVHWLEHFIQFTKPSDDRKVLLVLDNHLSHCTIEAYELCRKHNIVMLSLPPHCSHRMQPLDVSYFGPLKKRFKYECDVYMKSKCLEKITPYIIAELFGKAYAEVASMTKSIEGFRATGIEPLNRFIFTDEDFLPETLLNPPLPLSPLAGSSTLSSTTIPSTLSPIVGPSTTSPPLATLLSDILPIPKPQTTCDIKKKSSRKQYSQILTLTPMKEVLKLKQERKLTLLNRNTKNGGKKNLRKKKLNFQSDNSDISDENVVHDICSFCKEFGKGDEMWFRCTVCGQWAHEECSGWDTPEEYICDICTN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00086087;
- 90% Identity
- iTF_00086087;
- 80% Identity
- -