Basic Information

Gene Symbol
Xbp1
Assembly
GCA_029448645.1
Location
CM055679.1:36643481-36645220[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.1e-14 1.2e-11 44.9 12.0 2 61 83 142 83 146 0.95
2 2 2.3 2.5e+03 -1.0 0.4 35 49 196 210 193 224 0.76

Sequence Information

Coding Sequence
ATGAGCGTACTGAAGAGCGTCATCATCACGCTGCCTAAGGGCCTGTCCAAGGTGCCTGGCGGGATTTCGGGCAACGAGTTCGGTAAATCGGTACCGAAGTTCAATTTCACCACATCTATATTGGCGGACAAGAAAATGGACCCGAGGAGACTGAGCAGGCACGAGGACATGCAGGACGACGGCGTGCTCTTCAAGACGGACGTctgtgtccgcgggaagaaacGGAGGCTGGACCAcctcacgtgggaagagaagCTGCAACGGAAGAAACTGAAAAACAGAGTTGCAGCTCAGACCTCGCGGGATCGGAAGAAGGCCAAGCTAGACGAATTAGAAGACACAGTTAGGGCATTAAGGGAGCATAATGAATTGTTGACACAGGAGTGCACTGTGCTGAGGTCACAGAACGAGTTGCTGGTCACGGAAACGAAGAGTGTCCCCCATACACCCTCTGCAGCAGGGTGGAACAACACAGCCGGCACCGTCTCTGACGCTAACCCCAAGAGCAGCAATCCTCCTGAAGATACTGACCATTTACCTCCTCTTGAAGAACTGTTTGGCGACCTCCAAGGGGACGATTACATCGAGCGACTCGAAGAACTTGCAGAAAGCCTTCTGCGAGAGGTTACCGCAGAAGTGGAAGCAAATCCTCAGAGAACAAATGAACAAGTGTCAGTCGAGGAAGATACCACTGAGAAATGTGACCATTCGGAAAGAGTGGTGGGGCAGGCACCAAAAGATGTGGAAGCCAGTAGAGCCTCTAGAAGCATGAACACCTACCAATCGTGGCATCCTGTTTCCAGCACAGCTACTACAGCTTGTAGCGCAACTGTAACGGCACCCGTGTCGATCAAATCGGAGGTCGAAGTGAAGGAAGAGGTCGACACGCACGATCTCGACACCGTTTACGGCACTTACGACGAGTCCACCAACTCCATCACGATTATTTACCCAGGGGACGAGAACAGCTTAGGCATTCAAGAGTGCGTTCAAGAAGTGAGCACGGACGGCGCTTGTTCGACCGAGGATTCGTCGCATCTCACGCCCAATTACCCTTATTCCAATCAGTTCTCACCGTCCTACACGTGCACGGACTCGATGTCGCCGTCGAGCATACATTCCGAGGACGTGGAGAACAGGTTCGCGCAGACGAAACTGGACTCGAACGCGTCCGATTGCGGGTACGAGTCCCACGGCTCCCCGGCACCCGACGTGCGTAACGAGAAGGTCAGCGTGGCACTGACGGACCTCTGGCACGAAAGCTTCTCAGAATTATTTCCTACGTTAGCATGA
Protein Sequence
MSVLKSVIITLPKGLSKVPGGISGNEFGKSVPKFNFTTSILADKKMDPRRLSRHEDMQDDGVLFKTDVCVRGKKRRLDHLTWEEKLQRKKLKNRVAAQTSRDRKKAKLDELEDTVRALREHNELLTQECTVLRSQNELLVTETKSVPHTPSAAGWNNTAGTVSDANPKSSNPPEDTDHLPPLEELFGDLQGDDYIERLEELAESLLREVTAEVEANPQRTNEQVSVEEDTTEKCDHSERVVGQAPKDVEASRASRSMNTYQSWHPVSSTATTACSATVTAPVSIKSEVEVKEEVDTHDLDTVYGTYDESTNSITIIYPGDENSLGIQECVQEVSTDGACSTEDSSHLTPNYPYSNQFSPSYTCTDSMSPSSIHSEDVENRFAQTKLDSNASDCGYESHGSPAPDVRNEKVSVALTDLWHESFSELFPTLA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00086857;
90% Identity
iTF_00088538;
80% Identity
-