Basic Information

Insect: Andrena bicolor
Gene Symbol: zfh1
Assembly: GCA_960531205.1
Location: OY482666.1:18683784-18693867[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.86 72 4.4 1.1 2 23 74 96 74 96 0.90

2 7 2.7e-05 0.0023 18.6 0.6 2 23 115 136 114 136 0.97

3 7 6.4e-06 0.00053 20.6 7.8 1 23 145 167 145 167 0.99

4 7 1.6e-05 0.0013 19.3 1.9 1 21 173 193 173 194 0.95

5 7 0.00025 0.021 15.5 4.5 1 23 640 662 640 662 0.94

6 7 3.9e-05 0.0032 18.1 6.9 1 23 668 690 668 690 0.98

7 7 0.0017 0.14 12.9 4.3 1 21 696 716 696 717 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.86	72	4.4	1.1	2	23	74	96	74	96	0.90
2	7	2.7e-05	0.0023	18.6	0.6	2	23	115	136	114	136	0.97
3	7	6.4e-06	0.00053	20.6	7.8	1	23	145	167	145	167	0.99
4	7	1.6e-05	0.0013	19.3	1.9	1	21	173	193	173	194	0.95
5	7	0.00025	0.021	15.5	4.5	1	23	640	662	640	662	0.94
6	7	3.9e-05	0.0032	18.1	6.9	1	23	668	690	668	690	0.98
7	7	0.0017	0.14	12.9	4.3	1	21	696	716	696	717	0.96

Sequence Information

Coding Sequence: ATGCTGACCTTCCAGAGGGTGAAACGAAATGATTTTACGATGGGTTGCAGCGAGGACGAGGCAGCAGGTGTCGTGAACGCTGAGGTGGGCGGAGGTTGCGCGGCCGGGGCGCCAACCACAGGAAGTTCTGCTGGAGGTGGTGGTAGCGGGCCAGGAACAGGAGGTAGTGGCGGCCAGGGTGGCGGCGGTGAGGGCGGATCGACGAAACAGGGTGGCGAGAGGTGTCCCCAGTGTGGTATCCTCTGTCGGGACGTTCACGTCCTTCAGCTCCATCTCGAGGACACGCACAAGACCACCTACCCCATCGACAAGAACGATCTCAACGCTCAATTCCCCCAAGTGTCCTGCAAGGTGTGCAGCAAGACTTTTGCTAACGTCTACCGACTCCAGAGGCACATGATCAGCCATGATGAGAGTGCCGTGCTTCGTAAGTTTAAGTGTCCCCATTGCGAGAAAGCCTTCAAGTTTAAGCATCACCTCAAGGAGCACCTCCGCATACACAGCGGTGAAAAGCCATTCCAATGCAACAACTGCGGCAAACGTTTCTCCCACTCGGGCTCGTACTCGAGTCACATGACGTCCAAGAAGTGCTTGATAGTGAACTTAAAGAAATCCAGACACACAAGCGTCAACAAcgtcgatcgcgggccgaaaaAGGCGCAGCAAGCCCTGCCGCCGGGACGACGCGAGGTCGATCTGCTCACGGCGAATAATAACACTTTCCTCCCTATTCTGCCGAAGCTTTCACCCTCAGATTATCAAGAGATACAACGAGAAGGAGCAGGTATTTACGATATGCCGACTCTTTTGCCCCAAATGATGGGGTTTGGTAGTTATTTCCTCCAAACGTCCCTGGGCAAAATCCTAAACCAGCTACATTCCAAGAGATTGGACGAAGTAGCCGAGCAATTCGAGTCTCATCGGGAGCTAATGAGTCCGTCCACGGCGGACTCCGAGGGCACGGAGGGCACAGAGGGCAAGGAGTCACCTGCCCCAACCGAATCTCAGGGTCTGGACGCGGTTCGACGAATTTTAGAAACTGTCAATACCTCGGTCACGAAACAGCTACTGGAGGCGAACGTGCGGAAACTATCCACTTCACCAGCCACGATGAAACAGGAGCTCGAAGAGGATTGTCAAGATCAAGACAGCGAAATGTCTAGCGAGATGGCACACTATCCCGACTGGTCGACGGCAGATCAGTACGATTCCCAGAGCGAAGGTTTAGCGGCGAAGCTCGAGGACGTGAATCAACCCACCGTGAAATCAGGCTGCAAGAGAAAAGCCGAAGACAGCTCTGAAGCGGAGTCcgaggacgaggaggacggCACCCAGACTCACAATGATAACGGAAGAAGAGTGAGAGCCAGGTCATTGATAGACGACGAACAACTGGCTGTTCTAAAAGGGTACTATGCCATAAATCCTCGGCCCAAGAAAGAGGAGATCATCATGATCGCCAATTACATCAACTTCCCCACTCGCGTTGTACAGGTCTGGTTCCAAAATTCGCGGGCGAGAGATCGACGGGAGTCGAAGATACCGGCTTTACTGCCGTTGAACACTCCGATCAGTCAAACCGCGATCGAACAACCGCTCGACTTGTCGAAAAAAGAAGCGCTCACGCAATCGGTCTGCAAGGACAACGACGCTAATTCGATGAAAATCGTCTCGTCGCCCCCCGCCGACCAGAAGAGTACTGACACCTCGTCGTTACATAATCCTGACACGGATGACCTGGAGGATTCGCCCCTCGTTATAGACGAGGAGACTACCGATTCCGTGGAAACGAAACGCACACCTCCTGCACTGGGAGAAATTGTTCCAAAGAATCAACCTCCGGCTAATGGGAAGAACGAGAACGAAAACGCGAATCAATCGGAGGCTCCGTCAGCAGGAGAAATCGAGCAAGGTGTTTACTTCTGTGATCGGTGTGACAAAACATTCTCCAAGCACAGCTCCCTGGCAAGACACAAATACGAACATTCCGGGCAAAGGCCGTACAAATGCGGGGAGTGTCCAAGGGCGTTCAAGCACAAGCATCATCTGACCGAACACAAGCGACTACACAGCGGCGAAAAGCCCTTCCAGTGCTCCAAGTGCCTCAAGCGCTTCTCTCACTCCGGCTCCTACAGCCAGCACATGAATCACCGTTCCTCTTACTGCAAGCCATATAGAGAATAG
Protein Sequence: MLTFQRVKRNDFTMGCSEDEAAGVVNAEVGGGCAAGAPTTGSSAGGGGSGPGTGGSGGQGGGGEGGSTKQGGERCPQCGILCRDVHVLQLHLEDTHKTTYPIDKNDLNAQFPQVSCKVCSKTFANVYRLQRHMISHDESAVLRKFKCPHCEKAFKFKHHLKEHLRIHSGEKPFQCNNCGKRFSHSGSYSSHMTSKKCLIVNLKKSRHTSVNNVDRGPKKAQQALPPGRREVDLLTANNNTFLPILPKLSPSDYQEIQREGAGIYDMPTLLPQMMGFGSYFLQTSLGKILNQLHSKRLDEVAEQFESHRELMSPSTADSEGTEGTEGKESPAPTESQGLDAVRRILETVNTSVTKQLLEANVRKLSTSPATMKQELEEDCQDQDSEMSSEMAHYPDWSTADQYDSQSEGLAAKLEDVNQPTVKSGCKRKAEDSSEAESEDEEDGTQTHNDNGRRVRARSLIDDEQLAVLKGYYAINPRPKKEEIIMIANYINFPTRVVQVWFQNSRARDRRESKIPALLPLNTPISQTAIEQPLDLSKKEALTQSVCKDNDANSMKIVSSPPADQKSTDTSSLHNPDTDDLEDSPLVIDEETTDSVETKRTPPALGEIVPKNQPPANGKNENENANQSEAPSAGEIEQGVYFCDRCDKTFSKHSSLARHKYEHSGQRPYKCGECPRAFKHKHHLTEHKRLHSGEKPFQCSKCLKRFSHSGSYSQHMNHRSSYCKPYRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00086058;
90% Identity: iTF_00085696;
80% Identity: iTF_00084420;