Basic Information

Insect: Andrena bicolor
Gene Symbol: -
Assembly: GCA_960531205.1
Location: OY482664.1:54768968-54772333[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00099 0.083 13.7 1.5 1 23 106 129 106 129 0.94

2 13 0.011 0.94 10.4 4.6 2 23 248 270 248 270 0.91

3 13 0.00053 0.045 14.5 1.2 2 23 314 336 313 336 0.95

4 13 6.3 5.2e+02 1.7 7.6 3 23 421 442 420 442 0.95

5 13 0.13 11 7.0 1.7 1 23 491 514 491 514 0.94

6 13 0.0011 0.09 13.6 1.2 2 23 562 584 561 584 0.95

7 13 0.00034 0.028 15.1 0.2 3 23 607 628 606 628 0.93

8 13 0.0082 0.69 10.8 3.6 2 23 668 690 667 690 0.96

9 13 0.11 9.3 7.2 4.2 3 23 705 726 703 726 0.92

10 13 0.00028 0.023 15.4 0.1 2 23 771 793 771 793 0.94

11 13 0.051 4.3 8.3 1.6 1 23 871 893 871 893 0.98

12 13 0.00011 0.0092 16.7 0.9 2 23 907 929 906 929 0.96

13 13 0.0072 0.61 11.0 0.8 1 23 1003 1026 1003 1026 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00099	0.083	13.7	1.5	1	23	106	129	106	129	0.94
2	13	0.011	0.94	10.4	4.6	2	23	248	270	248	270	0.91
3	13	0.00053	0.045	14.5	1.2	2	23	314	336	313	336	0.95
4	13	6.3	5.2e+02	1.7	7.6	3	23	421	442	420	442	0.95
5	13	0.13	11	7.0	1.7	1	23	491	514	491	514	0.94
6	13	0.0011	0.09	13.6	1.2	2	23	562	584	561	584	0.95
7	13	0.00034	0.028	15.1	0.2	3	23	607	628	606	628	0.93
8	13	0.0082	0.69	10.8	3.6	2	23	668	690	667	690	0.96
9	13	0.11	9.3	7.2	4.2	3	23	705	726	703	726	0.92
10	13	0.00028	0.023	15.4	0.1	2	23	771	793	771	793	0.94
11	13	0.051	4.3	8.3	1.6	1	23	871	893	871	893	0.98
12	13	0.00011	0.0092	16.7	0.9	2	23	907	929	906	929	0.96
13	13	0.0072	0.61	11.0	0.8	1	23	1003	1026	1003	1026	0.98

Sequence Information

Coding Sequence: ATGTCTTCGACGATGGCGCACGGAACGATGATATCGGACCTGACAGAATTGGGCAGCGACGGGTCCAGCTGCGGGGAACGCGAGGCGCGGAAACGCGTCCGAGTCGACACGGATTCAACGGGGCCGAAGAAGAGGCGGAAACAAACGACACCTGTGAGATTCTCTTCCACCTTGGTGACGCACGGCGGTCACGAGGAGTCCaacgaggacgaagacgaggacgaggacgaggatgaGGACAGCGAAGGTAAGCTGTCGTCGCAATCGCCCATACCATGTCGATCGTCGATACGGGACGAGAACCTCAATAACGAGTTCCGTTGCCAGTATTGTAGTCAGTTTTTCGATAGCAAGGAGACGCTGAACCTTCATCTCGATAACGAGCACGGTTCCGCGAATCAGATAGCCCGACAGATTCCGCCGAGTATCGCGATAAAGGTGGAACCGTCTCAGCAACTGGACCAATCCGAGAATCCTGTTAATCTTCTTAGCGTAAAGAACTTCGCGACTAACTGGCTAGGTGTTGGACAGCACGTGCAGATGCAGTCGCAGGCCGAGGAGTCGTGGCCCGGTCCCGCGAGTCAGATCGCCGCGTTGCCTAATCACTTGCAAGCCCTATCCGGTTTCCCGGGCGGATTGGCTCAGTACCTCCCTTTACCCAGCTTCCCCGGCACCGATCCCAGTCACATGGTCAGACCCTCGATAGGACCAGCGCCGGTCAGGATCTTCAATCCGGACGCGTACTGCGACCTGTGCAACAAAGAGTTCTGCAACAAGTATTTCCTCAAGACGCACAAAGCGAACAAGCACGGGATCTACGTGGACTCACCGGGCCCGAGCATGGTGGACAATAACGCGACGGGGCCGCTATATCCCGGCAACTTCCCCGCGAGCATGGTGAAATTAGAGCCGCCCGCGACGCCGCCGGCGCCGAGCGTCCCGTGCGATCTCTGCCAGAAACGGTTCAAGAACGAGGATTCGGTGCGCAAGCACAAGCAGAAGATGCACACCGAGCTGCCGGATCAGTCGCAGGAGCCGCAGACGAGTCTGTCGCAGAACGACGAGGACAGGGAGACGCCGAGGACTAGTCCCGGGGGTATGGAGGCGCTCTTCAAGCAGGAGTACGGAATGGAACAAGAGGATGCATCGTTCGTGCCGGCCCCCAGACACCTATCCCCTCAATCGATACAGCAGGCGCGAGACGCCGGCTTCAACGCCGATCGGCTGCGCCGCTTGGGTGTGATAAATCCGGACGCGTTCTGCGAGATATGCTGCAAAGAGTACTGCAACAAGTACTTCCTTCGGACACATAAGATGAAGAGGCACGGCATCGTGATCCAGGACAACGAGAAGTCGCCGGGTAACCCGGGTTCGGCGGCCACTTGGCATCAAGTGCAGACCAGCCCGCTGAATCTGATTGTCACGGAGAACACCAGCAGTATGGAGTCGAGCGAGCGGACCGGAGACGATTACGAGTGCAAACCTTGCGGGATACGCTTCCAGACAAATGGCCTCTACCAGGCGCACTGCAGGAAGATGCACGAGGGCGACGAACAGCACTCGCCTAAACAGGAATGCGATTTGGATACGCCCGACCAGCGGAACGACACGATCTCGGAAGATCTTCAAAAGCTGCAGACCATGCTGCTGCAGTTGAACGGGCTGAAGTCTGGCAAGGGATTGTCGTGCACCATGTGCGGCAAAGAGTGCGACTCCAGAGCCGCGTTGCACATCCATATGGTGACGGAACACGGTGTGATCGCAGAGGACACTACCTCGCCGCAAGAAAAGTCACCCGTAACCGCGGCGCCCGCCTTTTGCACCCTGTGCGGGAAGGACTATCAGAATCAGGATGCCCTTAGGAGGCACATCGCGGAAGAACATCAGCCATCGATTTCAAGCTCCATTCCTCAGGCTGTCACTACCACCACAACCAACACGAATCCGACGAGCCAGGCACCATCCGAGAGGAAAGTGACGTCCATGACGCCGACGTCGAGCTACTGCGAGATTTGTAACAAGGAGCTGTGCAATAAGTATTTCATGAAGACGCACATGCAGAGGATGCACGGCATCGAGATCGAGAACGGTGCTCAGATCGGAGGCGTTATATGCAACATCTGTAACAAGGAGCTGTGCAGCAAATACTTCTTGCGCGTGCACAAGCACAACACTCACGGAATCGTCGACGAGAACATCCCCAGCTCGACCAAGCAAGAGACGCAAGAGCCGACGAACGCAGAGGACGGTGCCTTGAAGCCTGAACAGCTGGGTGATCTGAGTCACAGATATTTCACTCACTTCACAGAAGTCTGTCCGATCTGCAGCCGAAGGTTCCGCAGTATAAAGTGGCTGAAGGCCCACTTGATGGGCGATCACGGAAAGGCTGGCATCGATAAATGGCGCGAAATGGAGCAGCAGTATCAAACGCCGCCCAGATCAGGAAACCGAGTGCTCAACGCTTCGAAAAACACGCAGAGCTCGAACTTGAAGATACCCAACGGATTCGATATTTCACAGCAGATCAAGTCTGCCGACTATCCTGGTCTAGGTAATCAGGTGCTGTCCAATTTGCTTGGATCAGCTTCGGAGGATCAACAGATGAAGAACTACCGTTGCTCCTACTGTAACTTCACGACCACCGTGCTGCCATTCCTTTTTCTTCACGAGAGATCTCACGTGAATTCCCAGGAGACCGTGGAAGGCGACAAGTCCCTTCAATGTCCGATTTGCTCGCAAGTTTTTCATCAGCCCGATATGTTGCATCAACATCTACTCACGGCGCACCAGTTCCCGATGCTGCTGTCACATTTTCAACCCCCCATCCTTAATAACTTGGGCCTGGATGTGGAGAGACTGAGCGAGCCGAAGGAGAAGCTCGGTCAAGAGGCGAAGGAGGATCGTACAGGGAACAGTCCGCCACTCACTGCCAATCAAACTATTCCCGAATCGGTCAGAAGCCAAAGACAGGACGACACGGCGGTTCAGGTGACCCCTCAGGGTGTGTACAAGTGCGCGCAATGCGGCTACGCCACGACCAATTTGAACAGAATCAAGAAGCACGTGAGGAAGGATCACAAGACGATCGGCGATCCCACCGATAGCGTGATCGCTGAGCTCAGCAAGAGCCTGAAGGATGTCGCCAACAAGCACAAACTGCCGGCTTGCTACGCGATGCCGCAGGACATGAACTCGAACCCCGACAAAACGATCATGCAACCGTTCTTGATCGAGGAACAGGACATACTGCAAGCTGGCGAAGAATCCAGCTCGGAGAAACGATTCGCAACCGCTTTGGTCTATTTGCCGGTGAAATCGCGGATCAGTAACGCGCTGACCGCGTCCTTCACCCTCAGTCCCGCTTGA
Protein Sequence: MSSTMAHGTMISDLTELGSDGSSCGEREARKRVRVDTDSTGPKKRRKQTTPVRFSSTLVTHGGHEESNEDEDEDEDEDEDSEGKLSSQSPIPCRSSIRDENLNNEFRCQYCSQFFDSKETLNLHLDNEHGSANQIARQIPPSIAIKVEPSQQLDQSENPVNLLSVKNFATNWLGVGQHVQMQSQAEESWPGPASQIAALPNHLQALSGFPGGLAQYLPLPSFPGTDPSHMVRPSIGPAPVRIFNPDAYCDLCNKEFCNKYFLKTHKANKHGIYVDSPGPSMVDNNATGPLYPGNFPASMVKLEPPATPPAPSVPCDLCQKRFKNEDSVRKHKQKMHTELPDQSQEPQTSLSQNDEDRETPRTSPGGMEALFKQEYGMEQEDASFVPAPRHLSPQSIQQARDAGFNADRLRRLGVINPDAFCEICCKEYCNKYFLRTHKMKRHGIVIQDNEKSPGNPGSAATWHQVQTSPLNLIVTENTSSMESSERTGDDYECKPCGIRFQTNGLYQAHCRKMHEGDEQHSPKQECDLDTPDQRNDTISEDLQKLQTMLLQLNGLKSGKGLSCTMCGKECDSRAALHIHMVTEHGVIAEDTTSPQEKSPVTAAPAFCTLCGKDYQNQDALRRHIAEEHQPSISSSIPQAVTTTTTNTNPTSQAPSERKVTSMTPTSSYCEICNKELCNKYFMKTHMQRMHGIEIENGAQIGGVICNICNKELCSKYFLRVHKHNTHGIVDENIPSSTKQETQEPTNAEDGALKPEQLGDLSHRYFTHFTEVCPICSRRFRSIKWLKAHLMGDHGKAGIDKWREMEQQYQTPPRSGNRVLNASKNTQSSNLKIPNGFDISQQIKSADYPGLGNQVLSNLLGSASEDQQMKNYRCSYCNFTTTVLPFLFLHERSHVNSQETVEGDKSLQCPICSQVFHQPDMLHQHLLTAHQFPMLLSHFQPPILNNLGLDVERLSEPKEKLGQEAKEDRTGNSPPLTANQTIPESVRSQRQDDTAVQVTPQGVYKCAQCGYATTNLNRIKKHVRKDHKTIGDPTDSVIAELSKSLKDVANKHKLPACYAMPQDMNSNPDKTIMQPFLIEEQDILQAGEESSSEKRFATALVYLPVKSRISNALTASFTLSPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00966247;
90% Identity: iTF_00087453;
80% Identity: -