Basic Information

Insect: Andrena bicolor
Gene Symbol: -
Assembly: GCA_960531205.1
Location: OY482667.1:30310391-30319152[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00042 0.035 14.8 0.7 2 19 449 466 448 470 0.89

2 17 4.2e-05 0.0035 18.0 4.0 1 23 476 498 476 498 0.98

3 17 0.0034 0.28 12.0 0.1 3 23 506 527 504 527 0.93

4 17 1.2 1e+02 4.0 1.2 1 23 534 557 534 557 0.97

5 17 4e-05 0.0033 18.1 0.8 1 23 561 583 561 583 0.97

6 17 0.0032 0.27 12.1 0.4 1 23 589 611 589 611 0.97

7 17 0.00026 0.022 15.5 2.0 1 23 617 639 617 639 0.96

8 17 3.3e-05 0.0028 18.3 3.6 1 23 644 666 644 666 0.96

9 17 0.78 66 4.5 1.6 1 23 1254 1277 1254 1277 0.98

10 17 0.00012 0.0097 16.6 0.7 1 23 1283 1305 1283 1305 0.98

11 17 0.043 3.6 8.5 1.4 1 23 1311 1333 1311 1333 0.98

12 17 1.7e-05 0.0014 19.3 0.3 2 23 1340 1361 1339 1361 0.96

13 17 0.18 15 6.5 0.7 3 23 1369 1390 1367 1390 0.95

14 17 0.00013 0.011 16.5 2.8 1 23 1394 1416 1394 1416 0.98

15 17 0.029 2.4 9.1 0.7 1 23 1421 1443 1421 1443 0.98

16 17 3.1e-07 2.6e-05 24.7 0.5 1 23 1449 1471 1449 1471 0.98

17 17 0.0012 0.099 13.4 1.7 1 21 1476 1496 1476 1497 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00042	0.035	14.8	0.7	2	19	449	466	448	470	0.89
2	17	4.2e-05	0.0035	18.0	4.0	1	23	476	498	476	498	0.98
3	17	0.0034	0.28	12.0	0.1	3	23	506	527	504	527	0.93
4	17	1.2	1e+02	4.0	1.2	1	23	534	557	534	557	0.97
5	17	4e-05	0.0033	18.1	0.8	1	23	561	583	561	583	0.97
6	17	0.0032	0.27	12.1	0.4	1	23	589	611	589	611	0.97
7	17	0.00026	0.022	15.5	2.0	1	23	617	639	617	639	0.96
8	17	3.3e-05	0.0028	18.3	3.6	1	23	644	666	644	666	0.96
9	17	0.78	66	4.5	1.6	1	23	1254	1277	1254	1277	0.98
10	17	0.00012	0.0097	16.6	0.7	1	23	1283	1305	1283	1305	0.98
11	17	0.043	3.6	8.5	1.4	1	23	1311	1333	1311	1333	0.98
12	17	1.7e-05	0.0014	19.3	0.3	2	23	1340	1361	1339	1361	0.96
13	17	0.18	15	6.5	0.7	3	23	1369	1390	1367	1390	0.95
14	17	0.00013	0.011	16.5	2.8	1	23	1394	1416	1394	1416	0.98
15	17	0.029	2.4	9.1	0.7	1	23	1421	1443	1421	1443	0.98
16	17	3.1e-07	2.6e-05	24.7	0.5	1	23	1449	1471	1449	1471	0.98
17	17	0.0012	0.099	13.4	1.7	1	21	1476	1496	1476	1497	0.94

Sequence Information

Coding Sequence: ATGGAGCTAGGGGAGGGAGAGGCGCAGATTTGTCGACTTTGTGGCCAGTGCGAGAGCATATACATCGACGTGTTCGGCGAGGAAGGGACTAAAAGATTTCTGGGCCTCAAGATCCACGCGAAAATCAACATTTTGATAGATGAGAGGGATCCTCTGCCCAAGGCGATCTGTGTTCAGTGTCTGGGCAAGCTCGAATTCGTTTGCGACTTCCAAGAGGAGTGTCTTCGCACCCAACAAGTGTTACGCGATCGATACAATCTACCGCCCTTAACAGAGATTGCTGAGGTAAAGACTGAAGATACAGCACCAAGTACGTCAACAAACAATAACAACAATGATACCAACAAAAACCTTAATTCTCCGAGCGACGGGGGTGTTAAGCAAGTAGAGCAACGTGTTTCCAGAACAACCCCGAAGCCACAAAGAAATTTACGAAGCCAGCAGCAAGTGAAAAGCAACGAAGAGACCACGAACGATCAGAATAATCCCGAAACCTTGAGCGAAGACGATGCGGAGATTATAAACGCTGTCCAAAGTACCGAAACAACTCCCCCGCGATGGTTGAGAAGTAGACAGAACACAGAAACTTCCACCAATGAAACAGCAGCCTCCGATACACCAATTGCGAATAGACTTAGAAGCCACGATAATACTGCCAGCGAGATAAACATTAATTCGCCTTGCAATAATTCCAGCGAGAACGTTGAAAAGCCACAAGACCCACGCACCATTCAAATTCCAACATCAGCTTTAAACAAACTCCTCAGTATCGTATCGAACTCGCCGAACATAGAAGTGTCCGTGAAGGAATCCAGGAATCAAAGCAACGACTCCGAGGACATCAGCTTCATCGTAGAATTATGTAAGAAGGAGAGCGAGGACGTTGCCACTGTGCGGGCACGTGTGTTTCCAGATAAAGGCTCGTGCTTGGTGGACAAGGATATTATAGCTCTTCTACAGAACCAGAATTGCGTAGAAATAAATAGTATAATAAACACCATTATCACCAGCAGCGTGAAGAACGGGAACTCGCCGAAGGCGAAGGATTCCACGGAATTCGAGCAGAAGTGGCAGGCCTCCCAGAACCCGGAGGAGCTGTTCAAGATCGACGGGGAAGAGATCCGCGTGGACGACAACGTCGAGCATGTTGTGACTGATAGTCAGACTGGTTATGCCTGTAAACTGTGTTGTAAGTTCTACGAGCGCAAGGACAAGTGTATGGTGCACGTGAAGACGCATCTGGGAATCAAACAGTATACTTGTATCCTATGTAATGCCAAATTCGTATGTAAATCCGACGTGATGAAGCACATCCGATGCTCTCACACAAACCCCAGGCCGATACAGTGCCCGAAATGTCCAAAGAGGTTCAAGTCCAAGTTCTATCTGATGGAGCACGATAACGTGCACAAGGGCGTGAGGCCTTATTCTTGCTCGGACTGCGGCCAGAGTTACCATCATAAAGTATCGTTGCAGATTCACATGAAGTCGCATTTACCTCCTCAGAATTTGGCATGCGAGTACTGCGGCAAAATATTCCCATATCGCACGAGACTGCTCAGCCACGTGGCTAGCGTGCACCTGAAGAACCGTCGGAACTTTAGGTGCCGTTTCTGTTACAATCTCTATTCGAGCCTCGCGGTCCTGAACGAGCACATTAAAACCCGCCACACCACAACTTATACCTGCGAGGTCTGCAACAAAACGTTTAAGGTCGCGTCCAAGTATAAGGCTCACGTGCTGCAGCACTCGAATCCGAAGCCCTTCGCCTGCAACATCTGCAACAATAGATACGCGTCTAAAGCATTCCTGAACGAACATCTGCTGAAGCACGAAGGGCTGAGGAAACACATCTGCCAGAATTGTGGTGCGAGATTCGCGCAAGCTAGTCATCTGGCTGCACACCGACACGTGCACGGCGAGAAAACGCACGCCTGCTCGGAATGCGGGCGAAAGTTCAATAGGCGCGATAACATGAAGGTACATAGAAAAAGACATTTCGAGGACCAAAAGACTGGCACTGATAAACAAAAGAACGCCTCCGACACCGACATAAAAGAGAACGATGGACTGCCGCAGAATGTTTGTATGCGATGTTTGGGAACGTTGGAATTTCTGTGCGACTTCTACGAGCAGTGTCATCTCACCCAGAAGGAGTTTATGCAGGCTAATAAAAATGAGTCGAAGCCGTCCCAACCAGACAGCGACGCCGAATCCGACAAGGAGAACACCTTCCCATCGACGAACGACGTGAAACGGAAAGCGAAACCCTTATCGCCTGTTCATTCAAAGAGTACAAAAAATGGTTTGACCAATGCATCGTACTACAAAACCGAAAGTAAACATGAAATTAGTAATCCTCGTCGCCTAGATAACAATGATTGTAGTAAGGAAGTTCAGTCAGCTGCGGATAGGACAGTACAAGCGAACAGTAGTCTCGTTCCCAAGAAACAATCCACGTTGGATCATATCGTTGCCCATGGGAAAAATTCGAAGGCCGAGGAGCGCAGTAGTAGCAGTTTGAAATGCAGAAGAAGTCCGATACCAGAAAAAGTAGACGCTCCAAAGGCGACTGTAATTCGTACCGCGAAATCAGAATCTATGAGCGATTcgataaattcaatttttaagaGTATTAGCGACGGTGATATGAAATCGGATCTGCCTGTACGCCGTAAACGGGGCAGGAAGAGTAAGTTAGAGAAGATGAAAGAAGCTGGTTTGTCCTTAGGTATAAAAAGGAAGATGCAAAGTAATTTAGATGACAATAACACTAACGATAATCAATATAAGAGACATTGCCTGCGTGCAATCTTTACGAATAATAAGTCAAAGACACCTAACAGTGCTGTGATTTCATCCAAAGCCGAAGTCGAGAAAGTAGTAGTAGTAGATACGATGTTAAGCGATTCTCGCGGCAAAATTAACAAAGATAAGAAGAACAACATTGTGTTCAACAATGGCCCCGCATTCGACAATTCGGTAGAAGCTAAAGCCAAGGAAGAAGGTTTTCcgaagaagaaggaagagaaTTCCGTGACGTGCAAAGCGATATCGGTTATCGTGAAGCAGGAGAAAGTAGAGACTGAGGATGCACCCCTCCAACGAACTGGTAAATCGAATCAGCTCGTTTGGATCCCTAACGAGATGCTCATACAGGAGCCAGAATGTCGAAGTCGTAAGGTGCAACAGCACACGGAATCGTCGCCTGTGATTCCTTCATTGAGGAACGAAACGAAACGGACTGAAAGCAGCGAGAGCAATTCCACAGTACAATCTGACGTCTCGGAGGATTCGGACGTTTCCACTAGCACCGATCCCGAGGACCTGGAACCAAAAATGTTCGCGAAGCAGAACCGGGTGACTGTTATAAAATCTTCGCAGACCAAAGATATCAGTATCGAAGGAACGATAAGGAAGGATTCTGAAAAGTTGAACGTCACGGCTGAGATGGATGATTTGAAATACGACGCTGCCGAATTACCGTCGTCGCGACGTCGCAGGCGAAACAGCAGCTTCGTCGAAAGCAAGAGTAGGGACAGATCATTCGGTAAAGTCTCCGAATTGATGAGCGACGAGCAGAAGCAAGTTATTGAAACATACTACACGGTTGATATGTCGATGGTCAACTCGAAAGAGGTGCAGGAGAATTTAACGATAATCGATAAGAAGAATATACGCTGCAATATCTGCGGCACGCTTTACCTCAGGATGGATAAGTGTCAGGTGCATATTTGGGGGCACTTACAAATGAAACCATACCAGTGCAAGGCCTGTGACTTCGCGACAGTAACAGTTAGTAACGTGCGGTGTCATATTAGGAAGAGCCACCTGAAGATTAAACCTTTTGAGTGCCACCTTTGCGAAAAGCGATACGTGACCTCGGCTCTGCTAGACGAACATATTAATACTCATACGGGCGAACGCCCGTTTAAATGTAAACTCTGTGATTTCGCAAGCGCAAGTAGGCAAATGCTTAGTTACCACACCTCCACTCATAAGCCAATAAAAGACATCAGCTGTCAGATTTGTGGGAAAAAGTTCTACTCAAGAGGCAGATTACGCGCGCACATGATAATACACAATAAAGACAAAGTAGTCATATGCAAATTATGCTCCGCCTATTTGTCCAACGCGGAATCGCTGGAAACGCATCACAGGAACTTTCACATGCAGGATTACGTGTGTAACGTCTGTGGCAAGCATGTAAAATCGAGGAAGGCGTTGCATAATCATCAAAATGTTCATGCCGCTGCGAAATACAAGTGCACCCTCTGCCCGAATGTGTACAAAAGTAGTCAAATTCTGAAAGAACATCTCTTAAAGCACAAAGGTATCCGAAAATACAAATGCAACGTCTGCGAAAAATCGTTCGGCCAGCAGTCTCATTTAGCGGCTCACATGGCTGTGCATAGCGAGATTAGGTTTCATTGTCCGGCGTGCGACAAAGCTTTCAACCGACACGATAACATGAAGATACACACTAAACGGTGTAAACCGTTCCTCGCCAATCCAGATCTAAAGGATCTATGGAGCAAGAAGACGACGAGCGCGCCTTTCAATAAGACGGCGGAGTTGACCGAAGATTTTAAGAACGGGGACTCGTCGAATTCTGCGTCCCACATTGACGATCCGGACGAGGAATCGTCGACGAATAATGTAGACGATAAGGAAAAGGCTGGGATGAACCTCTGTAAATTAGGGCTGAATATTTCTTGCATTAAGTCGACGAACCAAGCGTGGAGTCACGACGACGTGTATGCAGATGCGGATGGGATAACGAGATCCGCCGAGATCAGTGTGATTCAGATCCTTCCGGAGAACGAAAATGTAACAGTCCTCGAGAATGTTTTGGGACCAGAGAGCTTTTGA
Protein Sequence: MELGEGEAQICRLCGQCESIYIDVFGEEGTKRFLGLKIHAKINILIDERDPLPKAICVQCLGKLEFVCDFQEECLRTQQVLRDRYNLPPLTEIAEVKTEDTAPSTSTNNNNNDTNKNLNSPSDGGVKQVEQRVSRTTPKPQRNLRSQQQVKSNEETTNDQNNPETLSEDDAEIINAVQSTETTPPRWLRSRQNTETSTNETAASDTPIANRLRSHDNTASEININSPCNNSSENVEKPQDPRTIQIPTSALNKLLSIVSNSPNIEVSVKESRNQSNDSEDISFIVELCKKESEDVATVRARVFPDKGSCLVDKDIIALLQNQNCVEINSIINTIITSSVKNGNSPKAKDSTEFEQKWQASQNPEELFKIDGEEIRVDDNVEHVVTDSQTGYACKLCCKFYERKDKCMVHVKTHLGIKQYTCILCNAKFVCKSDVMKHIRCSHTNPRPIQCPKCPKRFKSKFYLMEHDNVHKGVRPYSCSDCGQSYHHKVSLQIHMKSHLPPQNLACEYCGKIFPYRTRLLSHVASVHLKNRRNFRCRFCYNLYSSLAVLNEHIKTRHTTTYTCEVCNKTFKVASKYKAHVLQHSNPKPFACNICNNRYASKAFLNEHLLKHEGLRKHICQNCGARFAQASHLAAHRHVHGEKTHACSECGRKFNRRDNMKVHRKRHFEDQKTGTDKQKNASDTDIKENDGLPQNVCMRCLGTLEFLCDFYEQCHLTQKEFMQANKNESKPSQPDSDAESDKENTFPSTNDVKRKAKPLSPVHSKSTKNGLTNASYYKTESKHEISNPRRLDNNDCSKEVQSAADRTVQANSSLVPKKQSTLDHIVAHGKNSKAEERSSSSLKCRRSPIPEKVDAPKATVIRTAKSESMSDSINSIFKSISDGDMKSDLPVRRKRGRKSKLEKMKEAGLSLGIKRKMQSNLDDNNTNDNQYKRHCLRAIFTNNKSKTPNSAVISSKAEVEKVVVVDTMLSDSRGKINKDKKNNIVFNNGPAFDNSVEAKAKEEGFPKKKEENSVTCKAISVIVKQEKVETEDAPLQRTGKSNQLVWIPNEMLIQEPECRSRKVQQHTESSPVIPSLRNETKRTESSESNSTVQSDVSEDSDVSTSTDPEDLEPKMFAKQNRVTVIKSSQTKDISIEGTIRKDSEKLNVTAEMDDLKYDAAELPSSRRRRRNSSFVESKSRDRSFGKVSELMSDEQKQVIETYYTVDMSMVNSKEVQENLTIIDKKNIRCNICGTLYLRMDKCQVHIWGHLQMKPYQCKACDFATVTVSNVRCHIRKSHLKIKPFECHLCEKRYVTSALLDEHINTHTGERPFKCKLCDFASASRQMLSYHTSTHKPIKDISCQICGKKFYSRGRLRAHMIIHNKDKVVICKLCSAYLSNAESLETHHRNFHMQDYVCNVCGKHVKSRKALHNHQNVHAAAKYKCTLCPNVYKSSQILKEHLLKHKGIRKYKCNVCEKSFGQQSHLAAHMAVHSEIRFHCPACDKAFNRHDNMKIHTKRCKPFLANPDLKDLWSKKTTSAPFNKTAELTEDFKNGDSSNSASHIDDPDEESSTNNVDDKEKAGMNLCKLGLNISCIKSTNQAWSHDDVYADADGITRSAEISVIQILPENENVTVLENVLGPESF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00089032;
90% Identity: iTF_00089032;
80% Identity: -