Basic Information

Insect: Andrena bicolor
Gene Symbol: -
Assembly: GCA_960531205.1
Location: OY482666.1:12874853-12876881[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00055 0.046 14.5 0.9 2 23 126 147 126 147 0.97

2 11 0.0065 0.54 11.1 3.6 2 23 218 239 217 239 0.90

3 11 9.9e-07 8.3e-05 23.1 0.7 1 23 363 385 363 385 0.98

4 11 4.7e-07 3.9e-05 24.1 1.6 1 23 391 413 391 413 0.98

5 11 7.3e-07 6.1e-05 23.5 2.0 1 23 419 441 419 441 0.98

6 11 0.0028 0.23 12.3 1.6 1 23 454 476 454 476 0.94

7 11 8.4e-08 7e-06 26.5 1.1 2 23 483 504 482 504 0.97

8 11 1.3e-07 1.1e-05 25.9 3.0 1 23 510 532 510 532 0.98

9 11 1.5e-07 1.3e-05 25.7 2.4 1 23 538 560 538 560 0.96

10 11 0.00017 0.014 16.1 5.2 1 23 566 588 566 588 0.96

11 11 1.3e-05 0.0011 19.6 2.8 1 23 594 616 594 616 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00055	0.046	14.5	0.9	2	23	126	147	126	147	0.97
2	11	0.0065	0.54	11.1	3.6	2	23	218	239	217	239	0.90
3	11	9.9e-07	8.3e-05	23.1	0.7	1	23	363	385	363	385	0.98
4	11	4.7e-07	3.9e-05	24.1	1.6	1	23	391	413	391	413	0.98
5	11	7.3e-07	6.1e-05	23.5	2.0	1	23	419	441	419	441	0.98
6	11	0.0028	0.23	12.3	1.6	1	23	454	476	454	476	0.94
7	11	8.4e-08	7e-06	26.5	1.1	2	23	483	504	482	504	0.97
8	11	1.3e-07	1.1e-05	25.9	3.0	1	23	510	532	510	532	0.98
9	11	1.5e-07	1.3e-05	25.7	2.4	1	23	538	560	538	560	0.96
10	11	0.00017	0.014	16.1	5.2	1	23	566	588	566	588	0.96
11	11	1.3e-05	0.0011	19.6	2.8	1	23	594	616	594	616	0.99

Sequence Information

Coding Sequence: ATGTTTATCGTCACTAAGGAAATCGACAGCGAGAATATTGGCAAATTATGTCGTACATGCTTGAGGGAAGACGGGGACAAAATGGTTTGTCTATTCGTGGGACCTGCGGGCTCCTCCCTTGCTGCCAAATTGCGGTCTTTGTCCTGTCTAGAAGTTTGGCAAGGCGATGGTCTCCCGGAAAAAATGTGCGATCGCTGCGTAACCAGAGCAGAGTCTGCTCTATTGTATAGGGAGCAATGTCGCGCAGCAGATAGAGCATTGAGGCAAGCCGCTTTGAAGGTTTCTGGTTTAACGTCGTACGCCACAGTTTCTGGATGCAAGCTGTATCAGCAGAACCAAGCTTTCGTGCCAGTTCAGAGTTCCCATAAAACTGCAAAGTGCATGGAATGCGGGGCTGTGTTTACCAGCTACCAGGAGCTATGTGCTCACAGCAGGCTGCATCTGCCCTTCGTTCAGGACAACATACCCATGCAGCACATGCACATAGTTGAATCTCAGAATCCCTATCTAAACTTCAATTTCAGCCACCTGAGCTCCAATGTATCCAGCGACGGCGTTCAAAACGCGCAGATGTCCCCCCTGATCAGGTCGAACATGATGCAAATGATTCCTGCGAACGGGGAGAACTCTAGCCGCGCCGCTTGCGCTTTGCATTGCTCCCTGTGCAATCATACCTTCACTAACAGGACCCAGCTGATGAGCCACAATATCGCCCATAGCACGGAAAACGTGGAGATATCTTGCGACAATGAGAACATAGATATCTGCGACAATTCCAATCAAGTGCCCCAAAATTTAAGCTACGAACGGTCGATCAATTCTGTCGAGAACACCATTCAGAATTTGTCTTATCAAAGACCCACGACAGCCGACAACAACGAGATACAGAATCTGAGTTTCCCCGAGAACATAGATTTAGAGGAGGTCCAAAGCAGCAGTCCTCAGCGCGTGCAGAATACATTCGCGAAGGATATTGCGCGCACGGAGGACAGGGAGGAGGATATCGATAGGTACCCCTTGTGTCCTCCCGTTCTAAATTACAAGCCCGAGATCGAAGAAAGCCCAGCGGACGTGCAATCGAAAAAGTACAAATGCGAGGTGTGCCCCAAGCTGTTCTCCCAGAAATCCAAATTAATGGCTCACCAGCTGTCCCACTCTGGCCAACAACCGTTCAAGTGCCAGACCTGCGAGAAAGCTTACTCCTCGAAGAGCAAACTGAACGCCCACATGCGACTGCATACGAAAACCAACGTGCACCAGTGCAAGATGTGCGACAAGGTGTTCGCCTATCCGTCCTACCTGCGGGATCACTTGAAGAGCCACAAGCAGAGCTCCGACAATGCCAGCAACGAGAAGAGCTTCGAATGCATCACCTGCAAGAAGAGGTTCCGCCTTCTGAAGAACCTGAGGGCTCACGAGAGGCTGCACACGGGGAAGGGTCTGCTGCACTGCGAGATATGCGACAAGAGGTTCAGCCAGGCCTACAACTTGGAGGTCCACCTGCGGACGCACAAGGCCGCCAGGTCGCACAAGTGCGAGTACTGCGGCAAGTGCTTCGTCCAGAAGGGCAACCTCGTCGAGCACCTGAGGATCCACACGAAGGTGAAGCCGTTCGAGTGCAAGATATGCGGGAAGCGGTTCTCGCAGTCGAGCCACCTGAAGAGCCACGAGGCTTCGCACGCGTCTCTCAGGCAGCACCAGTGTCGACTGTGCGGGAAGAGGTTCAAGCTGGCGAATCATTTGAAGAGACACCTGACCCTGCACACCGGCGCCAAAGCGTACAAGTGCAACCAGTGCAACCAGCTGTTCTCGCAGGCGTTCAGCTTGACCAGGCATTTGAAGAGGCACGAGTCGTAG
Protein Sequence: MFIVTKEIDSENIGKLCRTCLREDGDKMVCLFVGPAGSSLAAKLRSLSCLEVWQGDGLPEKMCDRCVTRAESALLYREQCRAADRALRQAALKVSGLTSYATVSGCKLYQQNQAFVPVQSSHKTAKCMECGAVFTSYQELCAHSRLHLPFVQDNIPMQHMHIVESQNPYLNFNFSHLSSNVSSDGVQNAQMSPLIRSNMMQMIPANGENSSRAACALHCSLCNHTFTNRTQLMSHNIAHSTENVEISCDNENIDICDNSNQVPQNLSYERSINSVENTIQNLSYQRPTTADNNEIQNLSFPENIDLEEVQSSSPQRVQNTFAKDIARTEDREEDIDRYPLCPPVLNYKPEIEESPADVQSKKYKCEVCPKLFSQKSKLMAHQLSHSGQQPFKCQTCEKAYSSKSKLNAHMRLHTKTNVHQCKMCDKVFAYPSYLRDHLKSHKQSSDNASNEKSFECITCKKRFRLLKNLRAHERLHTGKGLLHCEICDKRFSQAYNLEVHLRTHKAARSHKCEYCGKCFVQKGNLVEHLRIHTKVKPFECKICGKRFSQSSHLKSHEASHASLRQHQCRLCGKRFKLANHLKRHLTLHTGAKAYKCNQCNQLFSQAFSLTRHLKRHES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00086561;
90% Identity: iTF_00087368;
80% Identity: -