Basic Information

Gene Symbol
pnr_2
Assembly
GCA_030264675.1
Location
JARJDV010007423.1:3707-5346[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.1e-16 3.8e-13 48.7 4.3 1 35 264 297 264 298 0.93

Sequence Information

Coding Sequence
ATGGCGCAAAGAACAAGTAACGTTAAGGAGGACGTCGACAATTTCGAGAAAAGCATTAAGAGCGAGCCAGTGGAGTATTACGATGATGAACCGGATGCGCCAGCATGTGCAAACAGTATCATGGAAACGCCCGTCACAGATATGGACTCGGATGAGCCGGCGGATTTATCTAGTCGCCGGCCGGAAAATGTCACCTGCGTGCCAGAGCTGATGGACTTTATGAAGGAAGACGAGGATGCGGCATCTGACTACAGTAATAGCTCCGATCCTGACCGCCTAGAGGTGGATATGTCACAAGGCATGGAGGAGCACTCGAATTCAACGACTACGTCGGCGCCGTCGCCGAGTCCGACAGGCGACCACCACCTTCCGCCGCAATCAACAcatgatcatcatcacgaCACATTATGGCGCGCGCTGTCCCAGAATGGACGAGCGTCAGGACAGCTAACAGGCGAAGCAAGCCACTTACTGCGGAAACTCATTACGTGCAAGAAGCTGGGCATGACAATCACACCCACGCCGCCTTTTAAGAACAACGCGGATAACGCGGTTACCATTTCGCCCAGCAAAGAAGCAAAGCCGAAGGTCGGCGTTGGCCGCCGGAAACAAGTTTATCCAACGAAGATGGAGCCCGAAGATCTAAACAACAGCCAGCAGGCGAGTAGTGATATCGACATGGACGCTGACTACGTGAACGACTTTACGGGGAATACTTCCTGGTGCAACTTGTCACTGGTGAAGAATGTTAAAGGTGGTGCCGGAATGGCACGGCGTGTTGACCTATCCTGCACGAATTGCGGAACACAAACTACGACGATCTGGCGGCGCAACGTGAAGAACGAGATGGTCTGCAACGCATGTGGCCTGTACTACAAGTTACATGGGGTAGACCGGCCGCATACGATGCGCCGTGATACAATACATACTCGACGCCGAAGACCAAAGGATCAGGCGACTGAGAAACGTTCAAGTAATAAGAAGTCAGTAAATAATAACGCAAACAACAATACGTCCGAGATACCGGACTCGGAGGACGTGTTACGTGCCTTGCGGAAGCAATTGCAACCACATCTAGTGATGGCATTAACGGGTCAAAAGCTACCAGCAGTTTCCCCAATTCACCATCAGGCGGTAGTTGATTATCAAAAGTCTCTGTCCAACCATCAGTCGCCTTCTCGATCTGCTAAGGAGGGCGAgggcgatggcgatggcgatggcgaGTCCGACGAGGAGAACTACCACGACTTACCATTAAACTTAGTTGCAACGCAAATGGCGGAGACCGAACCACTGTAA
Protein Sequence
MAQRTSNVKEDVDNFEKSIKSEPVEYYDDEPDAPACANSIMETPVTDMDSDEPADLSSRRPENVTCVPELMDFMKEDEDAASDYSNSSDPDRLEVDMSQGMEEHSNSTTTSAPSPSPTGDHHLPPQSTHDHHHDTLWRALSQNGRASGQLTGEASHLLRKLITCKKLGMTITPTPPFKNNADNAVTISPSKEAKPKVGVGRRKQVYPTKMEPEDLNNSQQASSDIDMDADYVNDFTGNTSWCNLSLVKNVKGGAGMARRVDLSCTNCGTQTTTIWRRNVKNEMVCNACGLYYKLHGVDRPHTMRRDTIHTRRRRPKDQATEKRSSNKKSVNNNANNNTSEIPDSEDVLRALRKQLQPHLVMALTGQKLPAVSPIHHQAVVDYQKSLSNHQSPSRSAKEGEGDGDGDGESDEENYHDLPLNLVATQMAETEPL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00049569;
90% Identity
iTF_00049569;
80% Identity
-