Basic Information

Insect: Anaulacaspis nigra
Gene Symbol: RREB1
Assembly: GCA_030264675.1
Location: JARJDV010008456.1:816042-821075[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00042 0.039 14.3 0.5 2 23 81 102 80 102 0.97

2 16 9e-05 0.0084 16.4 0.3 1 23 116 138 116 138 0.98

3 16 3.5e-06 0.00033 20.8 4.3 1 23 144 166 144 166 0.99

4 16 0.17 16 6.1 0.2 1 23 264 288 264 288 0.83

5 16 0.0086 0.8 10.2 4.3 2 23 294 316 294 316 0.97

6 16 0.57 53 4.4 0.4 1 21 370 390 370 391 0.84

7 16 0.021 1.9 9.0 0.3 1 23 514 536 514 536 0.98

8 16 0.00048 0.045 14.1 0.4 1 23 545 567 545 567 0.99

9 16 0.00051 0.048 14.0 3.1 1 23 573 596 573 596 0.97

10 16 0.0012 0.11 12.9 2.1 1 23 940 963 940 963 0.96

11 16 0.001 0.093 13.1 0.4 2 23 1200 1221 1199 1221 0.97

12 16 0.078 7.3 7.2 6.3 1 23 1227 1250 1227 1250 0.97

13 16 0.0073 0.68 10.4 1.9 1 23 1277 1301 1277 1301 0.91

14 16 0.54 51 4.5 3.7 1 23 1361 1384 1361 1384 0.94

15 16 0.01 0.96 9.9 0.4 3 23 1432 1452 1430 1452 0.93

16 16 0.0046 0.43 11.0 5.9 1 23 1458 1480 1458 1480 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00042	0.039	14.3	0.5	2	23	81	102	80	102	0.97
2	16	9e-05	0.0084	16.4	0.3	1	23	116	138	116	138	0.98
3	16	3.5e-06	0.00033	20.8	4.3	1	23	144	166	144	166	0.99
4	16	0.17	16	6.1	0.2	1	23	264	288	264	288	0.83
5	16	0.0086	0.8	10.2	4.3	2	23	294	316	294	316	0.97
6	16	0.57	53	4.4	0.4	1	21	370	390	370	391	0.84
7	16	0.021	1.9	9.0	0.3	1	23	514	536	514	536	0.98
8	16	0.00048	0.045	14.1	0.4	1	23	545	567	545	567	0.99
9	16	0.00051	0.048	14.0	3.1	1	23	573	596	573	596	0.97
10	16	0.0012	0.11	12.9	2.1	1	23	940	963	940	963	0.96
11	16	0.001	0.093	13.1	0.4	2	23	1200	1221	1199	1221	0.97
12	16	0.078	7.3	7.2	6.3	1	23	1227	1250	1227	1250	0.97
13	16	0.0073	0.68	10.4	1.9	1	23	1277	1301	1277	1301	0.91
14	16	0.54	51	4.5	3.7	1	23	1361	1384	1361	1384	0.94
15	16	0.01	0.96	9.9	0.4	3	23	1432	1452	1430	1452	0.93
16	16	0.0046	0.43	11.0	5.9	1	23	1458	1480	1458	1480	0.98

Sequence Information

Coding Sequence: ATGCAAGGTGTACTCTGCCTGCCGCCAGGACAATTGGATCGCAGCATGCCAAACAAAATCGATGAGATGGAAATAACAACCGAAACACGCAATAACTTGCAAAATCAATCGGATTCTTCAGGCGTCTTCTCCGCAACGGGCAACTCCACCACATCGACGCTGGACGATAATCGGACGCAATTGTCGGAGGGCGAGCACTCGGACAATCGATCCGAATGCAGCACGCCAGACAGGAAATCCGTATGTCCCATCTGCAACCAAATATTGAGTTCGCGACACGAATTCACCGTGCATATACGGCTGCACAATAACGATGCGGAGGCGCCACAAGATCCGGAAAAGGGGTATACATGCCGCATTTGCTCCAAGGTGTTGTCCTCCAGCTCGAGCCTCGACCGCCACGTTCTAGTCCACACGGGCGAACGGCCCTTTACGTGCAAATATTGCGGGGATACGTTTACGACAAATGGCAATATGCATCGACACATGCGCACGCACAAAATAGATAACAACTACGAATCGGATGGTAGTGTCGACAGCAATGCCAGCAGTGGTGTAACAACATCCACAAcccgcggaggcggcagcgggcGCAGTATTgaattcaacaacaataaactcGATTACAACAGCAATAATAACAGTAAGCGCAAGTTTGCGGAGAATGAgaatgatgaggatgatgtCAGAGATGTCGATCACGAAGATGACGAAGATCCTGCAAACGACGAAGAGTTTGATAATGAACAATTGGATCATCGTCGAAAGCGACCACATCTCGAAGCGTGTTTTAAATGCCCCGTGTGCAACCGTAGCGATTTTGCAAGTCGCCGATCGCTTGAAGTGCACGTAGAAGATAATCATCCGGATTATCCGGCTAAATGCCATCAATGCAATCAAATCTTCAATAACCAGAAGCGACTCAACTATCATAAGATGACTGTTCATGCAGACGACTCCGTCAACGGAAAgccaaataataaacaagttgTAATTGGATTTAAAGATCTTGATTATGTTGACTTTAGCAGCGACAAATTCCCAACAATTGCGCGCAACGAATGCGAATTGGTTTTCCATAGGGCGCAGCCTGCGACCGGACCAAAATACGTATGCGATAAATGTTCGCGTGCTTTTCCATGCGACAAGAGTTTGGAAATTCATGCTCGCGAATGCGGAACTCCACTcgagcagcaacagcaacaacaacgcctGCTTGACATCCGTCGTGTGGCTGAGAGCATAAAACGAGATGAATTCTTCCATCGCTTAGATCTCGAAGATAACAATGCGGAGAAATTGGCGCGCAACGCCGCGCGATTGCCCGCTCTGCTCGAAGATTCGCTCAAGATGGATTGTACGAAAGACTTGGCcgatattcaatcaattatttcgcTCACCAATGGCAGTTTCTTGCAACAACTCCACGGCTCCAAATCATCCGATATGTCGACGTCGCTAGAGCAAGAAAAAACAGAGGAGGAAGAGTCGCAAGATCAATTTGCGCAAGAATTTCGTAAAATGAAGTTGCGCGGCGAATTTCCGTGCAGACTTTGCAGTAGTGTCTTTCCAAATTTACGTGCTCTTAAAGGACACAATCGTACACATTTGAATAGCGCAACAAATGGCACATACAGGTGTAATATGTGTCCGTATTTCTCTCTGGACAAAGCGGCTCTCATTAGACATATGCGTACGCATAATGGCGATAGACCGTACGAATGTTCGCTatgtaattatgcatttaCAACAAAAGCAAACTGCGAACGACATTTACGTAACAGGCATTCGAAAAATACGCGTGAAGAAGTCAAAAAGTCGATAATTTATCATCCTTCAGAAGATCCTACCAATGATGAGATGTCTCGCTCTCTCGACTCCAAGAAGCTCAATACTAGTACTGACTCAACTGCAGGATTATCTGATTCCGGGGGCGGTCGAAGTTCAACGCCAAAGAATGTTCCGCCAGCATTTCCAGATCTATTCCCACTTTCGACAAAAATGTCAAGTgtgaacgaattaattttaaacgagAATTTGAAAGCTCTTGCTACTGAAACGCCTGCACGCGAGAATGACTGGCGGGACACGCAGTTTGCCACTTCCACGCCGCATAAAGCTACTCCCAACATTAGAGTGAAGGATGTTAGCGCGTTGAAGGAGATTCCTGAAGCCTCATCGTTTTCTGATAATGAAGAAAGCGTTCCGATGGATTTGAGCAAGAAGCCATCTCGCGAAACACCCGAACAAGATGCTGCTCAAGGGTTTGCCAAAGGGCCGGAAGTCGGACAATTTCCAATGGATATTCTCAGTCAACAACTTTTGAAGACATCTCCGACAGCTGATCCTGCGTTGTCCGCGTTTTTCGCCGCTCAAATGGCCTTTTTCAGAAGCGGAATGCCAAATATTTTCCCAGGATTTGCCATCAATCCGCTCTTAATGCCTCCAATCATGCCGGATGCAGCGATGACACAAGAAATGAAAGAGAGAATTCAGCGACAATTAAGCAATAGCAGCGCGCTAAAAAGCATGATGTACGCACCAGCCACCGCGTATCCCACTGCACTCTTTAGTGATATCAAAGCGAATGCTACCGGTCCGGAATGTAAAGCCGAAGAGATGAAACCCTTATCATTAAATGTGGATGTCAATTATAATGATGGCAATAActataatatgcaaatgaaggGAAGTGCTAGTCCCGTATTGTCAACAAAGACAAACGAACTCCAATCGCCAAATTCGGTCAAAATGGTAATCAAGAACGGCGTTCTTATGccgaaacaaaaacaaaggcGTTATCGAACTGAGAGGCCTTTCTCATGTGAACATTGTGCGGCAAGATTTACTCTTCGCTCAAACATGGAACGACACATTAAACAACAGCATCCACAATTTTGGTCTCAGAGACAACGCTCGTCAGGAATGAGCACTCCTGGTCGCAAACCATTATTGCAAACTGCGCAACAACCTACGAAAAACAATGCACTGCCCATGTGTGAATTAAGCATTCCAATGTATGAAGCAAAGAGTCAAAATGGAGATGATAATAAGACTGTAGTTAGTGAAAAATTACGTTATGCCATTTTGGCGCAACATTTGCGTAGTGCTGCCTCGCAAGACGCGCAGCAGCCAGAATCAGATACAATTAAGATcaagaaagaagaaatagCTCAAGACGAGGATGGCGATTCACTAGTTATCGATGAGGAAGATCAAGAACCAGAGAAAGAAATAGAACGTGAACGAACCTTGGATCATCCAAAGACGCGGATACTCGAAGAGAAGTTGAAAGAGTTGCGAGAACGCCAACTTTCCAaggaaaattacaaaaagtcCGATGAAGTTCCCGATTTGGTACCTGTCTCGAGATTATTGAACAACGCCTCGCAACCTCTGAATGAATTCAGGGAGTATTTCCGTCCGGATCAAGACGATCACGAGGGTGCTAGTGAGGAAGATGAGGAAGGTTTGGTCGCGAGTGGTAGCACTAGCGATGGCAATTCGGGGACAGATGAAAACCGATCGGAAAATGATAATGCTGCAAATCCGCCAGAGAAAAAGAAATCAGCCTATTCTTTAGCACCTAATCGCGTGAGCTGTCCGTATTGCAGTCGCAAGTTTCCTTGGACTTCTTCATTGCGTCGTCACGTTTTAACTCATACAGGCCAAAAGCCTTTCAAATGCAGTCACTGCCCACTGCTATTTACAACGAAATCGAATTGTGATCGGCATTTACTTCGCAAACACGGCAATTCTGCAACGACCATCAGCAACGAAACCTCGAGTAACAACAACTTTATGTTGCGTAACGTACCCGAGCGGCCCTTCAAGTGCGCCAACTGTCCATCGAGCACATTCTCCACGTATTCGAATCTTAAAAAGCATATGTTTGCAAAGCACGGAGTTCAGGATGATCGCCAAGGATACGAAGCGGGCAGCTCGGAGGACGAGAAGAATAATAGCGATTCAGCTATTTCGAATAACAAATCCTCTGACTGGGAAGCGCccataatgaaaatgttgccTATTCCATCTGATAGTAACCAAAACGCTCTCGCATCCAATTCGGATTTACCATTCAAGTGTCACTTGTGTGATAGCTCTTTCGGCGATCGCCAAGAGTGCTTAGAGCACATTCGCGATAAGCACGTATCCGAATACGAGGTCTTGATGAATAAGAATGCTCTTGATCCAAACGCATCGACGCCCGATGAAGGCAATCAacacgatgacgatgatggcgAAACGATTCGCGGCAAGTTTCCTGACTACTCGAATCGCAAGGTGATTTGCGCTTTTTGCATGCGGCGCTTCTGGTCAGCGGAGGACCTTCGCCGCCACATGCGCACTCATACGGGCGAACGCCCTTTTAGCTGCGATATATGCCGGCGGCGGTTCACGCTCAAACATAGCATGCTGCGGCATCGCAAAAAGCACAATGTATCAATATTTCCTCGGCCATGCGACCCAGAGAGCAACCACAGTGACGAGGAGAATGAGCAGAAGCCCCTCGTTATTAGAGACGATGAAAACGAGCGTGTGCGATTAGTCgaaaaagagaaagaagatTCATCAGATGCGAATGAGAGCGGTGGTGATCTTATTAGCAATTTACTGGGTATTCGTGATCGCTCCCTTATCGATCAAGTGCTCACTTCTTCCGCCGACGATGCCGCCAAACTTTTAGGCGTCGGCGCTAATAACGAATAA
Protein Sequence: MQGVLCLPPGQLDRSMPNKIDEMEITTETRNNLQNQSDSSGVFSATGNSTTSTLDDNRTQLSEGEHSDNRSECSTPDRKSVCPICNQILSSRHEFTVHIRLHNNDAEAPQDPEKGYTCRICSKVLSSSSSLDRHVLVHTGERPFTCKYCGDTFTTNGNMHRHMRTHKIDNNYESDGSVDSNASSGVTTSTTRGGGSGRSIEFNNNKLDYNSNNNSKRKFAENENDEDDVRDVDHEDDEDPANDEEFDNEQLDHRRKRPHLEACFKCPVCNRSDFASRRSLEVHVEDNHPDYPAKCHQCNQIFNNQKRLNYHKMTVHADDSVNGKPNNKQVVIGFKDLDYVDFSSDKFPTIARNECELVFHRAQPATGPKYVCDKCSRAFPCDKSLEIHARECGTPLEQQQQQQRLLDIRRVAESIKRDEFFHRLDLEDNNAEKLARNAARLPALLEDSLKMDCTKDLADIQSIISLTNGSFLQQLHGSKSSDMSTSLEQEKTEEEESQDQFAQEFRKMKLRGEFPCRLCSSVFPNLRALKGHNRTHLNSATNGTYRCNMCPYFSLDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHSKNTREEVKKSIIYHPSEDPTNDEMSRSLDSKKLNTSTDSTAGLSDSGGGRSSTPKNVPPAFPDLFPLSTKMSSVNELILNENLKALATETPARENDWRDTQFATSTPHKATPNIRVKDVSALKEIPEASSFSDNEESVPMDLSKKPSRETPEQDAAQGFAKGPEVGQFPMDILSQQLLKTSPTADPALSAFFAAQMAFFRSGMPNIFPGFAINPLLMPPIMPDAAMTQEMKERIQRQLSNSSALKSMMYAPATAYPTALFSDIKANATGPECKAEEMKPLSLNVDVNYNDGNNYNMQMKGSASPVLSTKTNELQSPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCAARFTLRSNMERHIKQQHPQFWSQRQRSSGMSTPGRKPLLQTAQQPTKNNALPMCELSIPMYEAKSQNGDDNKTVVSEKLRYAILAQHLRSAASQDAQQPESDTIKIKKEEIAQDEDGDSLVIDEEDQEPEKEIERERTLDHPKTRILEEKLKELRERQLSKENYKKSDEVPDLVPVSRLLNNASQPLNEFREYFRPDQDDHEGASEEDEEGLVASGSTSDGNSGTDENRSENDNAANPPEKKKSAYSLAPNRVSCPYCSRKFPWTSSLRRHVLTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNSATTISNETSSNNNFMLRNVPERPFKCANCPSSTFSTYSNLKKHMFAKHGVQDDRQGYEAGSSEDEKNNSDSAISNNKSSDWEAPIMKMLPIPSDSNQNALASNSDLPFKCHLCDSSFGDRQECLEHIRDKHVSEYEVLMNKNALDPNASTPDEGNQHDDDDGETIRGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHNVSIFPRPCDPESNHSDEENEQKPLVIRDDENERVRLVEKEKEDSSDANESGGDLISNLLGIRDRSLIDQVLTSSADDAAKLLGVGANNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00049450;
90% Identity: iTF_00049450;
80% Identity: -