Basic Information

Insect: Anaulacaspis nigra
Gene Symbol: prg
Assembly: GCA_030264675.1
Location: JARJDV010003164.1:7587-9448[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0041 0.38 11.2 2.9 1 19 158 176 158 181 0.83

2 9 0.00017 0.016 15.6 2.7 1 23 187 210 187 210 0.98

3 9 2.3e-07 2.2e-05 24.5 0.7 1 23 216 238 216 238 0.97

4 9 1.2e-08 1.1e-06 28.6 1.6 1 23 244 266 244 266 0.98

5 9 0.001 0.097 13.1 0.5 1 23 272 294 272 294 0.92

6 9 4.5e-06 0.00042 20.5 6.5 1 23 300 322 300 322 0.99

7 9 5.4e-06 0.00051 20.2 0.4 2 23 460 481 459 481 0.94

8 9 0.00042 0.039 14.3 0.3 3 23 489 509 487 509 0.97

9 9 1.4e-06 0.00014 22.0 2.7 1 23 515 537 515 537 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0041	0.38	11.2	2.9	1	19	158	176	158	181	0.83
2	9	0.00017	0.016	15.6	2.7	1	23	187	210	187	210	0.98
3	9	2.3e-07	2.2e-05	24.5	0.7	1	23	216	238	216	238	0.97
4	9	1.2e-08	1.1e-06	28.6	1.6	1	23	244	266	244	266	0.98
5	9	0.001	0.097	13.1	0.5	1	23	272	294	272	294	0.92
6	9	4.5e-06	0.00042	20.5	6.5	1	23	300	322	300	322	0.99
7	9	5.4e-06	0.00051	20.2	0.4	2	23	460	481	459	481	0.94
8	9	0.00042	0.039	14.3	0.3	3	23	489	509	487	509	0.97
9	9	1.4e-06	0.00014	22.0	2.7	1	23	515	537	515	537	0.98

Sequence Information

Coding Sequence: ATGAATATGACTGAAGATTGGCGATGTTATACAACGATTTGCCGATTATGTATGCAGAGAGATGGATACATGCTCGGAATATTCAATCATATACAAGGCAAGGAGCGTAGCATATACAAGAAAATCATGGACTGCACGGCTCTTGAGatcTCCAATGGAGATGGTTTGCCCAATTCGATATGTCATCGTTGCCtgtataaaattgaattctgcTTGGAATTTCGTCAGCAATGTTTTGTCTCAGATGCGACTTTGCGTCAAATAAATAGCTTGCCAAAGGATGCACAAGCCAATATAGGGCATCTTCTGCCGCCTCCATCCGACAACACGGTCGTCATGGTAGTCGATCCGAATATAATGGATTACGACTCTGAATACGAATCTGAGGCAAACGGAGAGAATTTAAATGGCGATCATAATAGCGATGCTGAAGCGAATGATGCGAATGATAGCTGCGAGTATAAGAACGTCTTCATGTGCAAGTACTGTGATAAAGCGTTCACCAATAAGACTGATTGCGGGAGGCATGAGACTGACGACCACGACGGCGACGAACCGTACAAATGTTCTGTTTGCGAGCGTCATTTTCCCGATCGAATGCAGTACTCTTCGCATTTAAAGACCTTGCATCAGAATGATAAACCGTATATGTGTCCCGACTGTTTTCGAAGTTTTGCGCGTCGCTCAGATCTCCGCAAACACACAATTGTTCATACGGGTGTCAAGCCATTCACATGCCCCATTTGTTTCAAATCATTTTCGCGCAATACGAATCTCTCGAAGCACATTCGCATCCACAAGGGGCAGAAGCCGTTTGTGTGTCGCAGTTGTCCGCGAAAGTTTATGTCCAAAGTGGAATTAACACGGCATGCCGTCCAGCATTCGGATGTTAAGCCATTTAAGTGCGATTACTGTCACATGAGCTTCATGCGAAAGGATAAATTGCAACGCCATCAGAAGCGCCACTTGCCGCAGGAGAACGCCAAGGATGCAGCGCTGGAGCTGCAGGCGATGCGCGAGAATCTTATGCAAGAGTATGGCATGAATGATTTTGCAAGCACGCAGGACAGTAATGATAATCATATCGATACCAACGGCATCAAAGAGGAGGACTCGAAGGACGATTGGCCCAGCACAGagaatatgattattaatatcgATCCTTTCAATCAGGATGCAGAAGGCGAACAAGGCGTTGAGCCTGATATGCAACTTAACAATGGCACTGATTCAGACGCCATGTCATCGACGCCAAGTCCGGAAAAACGACCAGATAGTCTGCCCAGTGTGCCAGAACATATTCTGAGCTATGCATTTCCTTCGAACACGAGCATCACAGAAGGCAACGAAAGCGAATCGTCTCCAACGCATCGCATACCCTGCACAGAATGCAATCAAAAGTTTCGCACTCAAGAAAGCCTAAACAACCATATGGGATTGCATAATGGCGATCGGCCGTTTGGTTGTTTTATTTGCGGAAAGGCTTTTCTGCGCAAACGAGAATTGGAAAGACATGGTGCAACGCACACtggaattaaacaatttcaatgcacATTGTGCGAGAAACGCTTTAGCCGCAAAGATAAACTTCTCAGACATTCGCGAATTCATATCGTACAGAAAGACGAACAGCAGACTGAGGGTGATAATGAAGtagatgattattaa
Protein Sequence: MNMTEDWRCYTTICRLCMQRDGYMLGIFNHIQGKERSIYKKIMDCTALEISNGDGLPNSICHRCLYKIEFCLEFRQQCFVSDATLRQINSLPKDAQANIGHLLPPPSDNTVVMVVDPNIMDYDSEYESEANGENLNGDHNSDAEANDANDSCEYKNVFMCKYCDKAFTNKTDCGRHETDDHDGDEPYKCSVCERHFPDRMQYSSHLKTLHQNDKPYMCPDCFRSFARRSDLRKHTIVHTGVKPFTCPICFKSFSRNTNLSKHIRIHKGQKPFVCRSCPRKFMSKVELTRHAVQHSDVKPFKCDYCHMSFMRKDKLQRHQKRHLPQENAKDAALELQAMRENLMQEYGMNDFASTQDSNDNHIDTNGIKEEDSKDDWPSTENMIINIDPFNQDAEGEQGVEPDMQLNNGTDSDAMSSTPSPEKRPDSLPSVPEHILSYAFPSNTSITEGNESESSPTHRIPCTECNQKFRTQESLNNHMGLHNGDRPFGCFICGKAFLRKRELERHGATHTGIKQFQCTLCEKRFSRKDKLLRHSRIHIVQKDEQQTEGDNEVDDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00049433;
90% Identity: iTF_00049433;
80% Identity: -