Basic Information

Insect: Anaulacaspis nigra
Gene Symbol: -
Assembly: GCA_030264675.1
Location: JARJDV010011404.1:14615-17710[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.8e-05 0.0017 18.6 0.7 1 23 138 160 138 160 0.95

2 15 0.00026 0.024 15.0 0.3 3 23 168 188 167 188 0.99

3 15 9e-05 0.0085 16.4 0.1 1 23 294 316 294 316 0.98

4 15 0.033 3.1 8.3 0.2 1 23 322 345 322 345 0.95

5 15 5.8e-08 5.4e-06 26.4 1.4 1 23 369 391 369 391 0.97

6 15 0.0025 0.23 11.9 0.0 1 23 404 426 404 426 0.94

7 15 0.18 17 6.0 0.0 1 23 432 455 432 455 0.94

8 15 0.41 38 4.9 6.2 2 19 463 480 463 484 0.91

9 15 1.6e-05 0.0015 18.7 2.5 1 23 490 512 490 512 0.98

10 15 0.00093 0.087 13.2 0.2 2 23 518 539 517 539 0.97

11 15 5.8e-06 0.00054 20.2 0.4 1 23 547 569 547 569 0.98

12 15 0.0025 0.23 11.9 0.2 3 23 577 597 575 597 0.97

13 15 7.9e-05 0.0074 16.6 0.3 1 23 603 625 603 626 0.95

14 15 0.024 2.2 8.8 1.5 1 23 640 662 640 662 0.96

15 15 0.00077 0.072 13.5 0.1 1 20 1008 1027 1008 1030 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.8e-05	0.0017	18.6	0.7	1	23	138	160	138	160	0.95
2	15	0.00026	0.024	15.0	0.3	3	23	168	188	167	188	0.99
3	15	9e-05	0.0085	16.4	0.1	1	23	294	316	294	316	0.98
4	15	0.033	3.1	8.3	0.2	1	23	322	345	322	345	0.95
5	15	5.8e-08	5.4e-06	26.4	1.4	1	23	369	391	369	391	0.97
6	15	0.0025	0.23	11.9	0.0	1	23	404	426	404	426	0.94
7	15	0.18	17	6.0	0.0	1	23	432	455	432	455	0.94
8	15	0.41	38	4.9	6.2	2	19	463	480	463	484	0.91
9	15	1.6e-05	0.0015	18.7	2.5	1	23	490	512	490	512	0.98
10	15	0.00093	0.087	13.2	0.2	2	23	518	539	517	539	0.97
11	15	5.8e-06	0.00054	20.2	0.4	1	23	547	569	547	569	0.98
12	15	0.0025	0.23	11.9	0.2	3	23	577	597	575	597	0.97
13	15	7.9e-05	0.0074	16.6	0.3	1	23	603	625	603	626	0.95
14	15	0.024	2.2	8.8	1.5	1	23	640	662	640	662	0.96
15	15	0.00077	0.072	13.5	0.1	1	20	1008	1027	1008	1030	0.93

Sequence Information

Coding Sequence: ATGGAGGAGTCCTACACACTGACATGGGAGGAGGCTGAGGAGGTGGTGACCTCTCAGGAAGTCATGTGTGATATGAACAATGAGAATATCATAACTACAGAAGAAACATTTGAAGATGTATGTGAGGAAGTGGTGGTTCAATCAGAGGAAGTTGTgcctgatgatgatgttgtttaTCTCACTGATAATGTGATTGTAATGCAAGATGCACAGGAGCTCACTTCAGATATGGTGCAGGATTCCACCTACATGGACTGTGTCACTGAGGAAGTTGTTGCTGAGGGCTGGGAGGGTTGCAATGAGCTCATAGTGGGCTCAGAGGAAAATATTGGCATTGAAGAGGAACCTGCTGAAGAGGATGTCATGATTCCTTTACCAACAGATCAAGATCAGTACTCAGCAATGCGCCCGTACCCATGTGATTTTTGTAGTCGACGGTTTCGGAAAAAGGCCAATCTAATGAATCATATGGTGGCCCATCAGACTGACAAACCGCATGGGTGTAATTTATGCGGTGTCCGATACGTCCGAAAATTTGATCTGATGAACCACCTGAAAATCCACGCATACGTGCCTGAAACAGATAATCTTGAAGAGGAACTGCCTGATGATGACTACGACAAAACACGAAAGCGGATGAAACCTAACTTCAtgacaaacaaaaagaagaaaaagatgCGAGGCATGGAGGATGATGATGGTCGAACGACAGCATCCAGTTCGCGTTCCTACTTCGAGGAAATGGGTGTTGAAGGCGAATTTGACAGCAAAAATATCCTCGCAGGCGAAACAAGGTATAtaatcaaaacatttatttactgtcaattgttattgttgcaatttgtcATTAGGTACCCGATAACGGACCCACGCAAACCCTTCGTGTGTCAGTATTGTGGTGTTGGCTTCGCCCGAGAGAAAGCTCTCGCATCGCACTCGCGGATGCATCAAGGCGATAGCCCCTTCGAGTGCCGGCGATGCGGCGAAATGTTCTGGGATGCCGACTTGATGCGGGAGCATATCAAGGATAAGCACGATGGCGTCGAAGAAGACTTTATGGAGGAGGAAGAATTCTCCGAAGAGGAGGAGAGCAAGTACGGTGAGTTCTTTTGCCCTACTTGCGGAATGACTTTCACGAGACAGGATCAGCTGAAGCGCCACCAGCAGGTGCACATCAAAACCGAATTTGTTACCGACAACGAAATGGCGCATATTTGTAACGTATGCGGTGAATCGTTCGCTGAAGCGCTGGATCTGCTAGCGCACGCCGAGATACATGCACGAAGCAGTGAATTTCGTTGCATGCTGTGTGGCGATACAACCACTGACGAACAGGCGCTTGCGGCACACGTTCAAGCCAAGCACGGTGATAATTTGCCGGATAATACTTGCTTACACTGCGGGCGCACTTGTAAAGACCGCCGTGCATTATTAACGCATTGCTTAGAGCACTCGAAGGAGAAAACGTTCCCGTGCCCCAAGTGCGCAAAAACGTTCCACAACAAAGCGCGTCTAAAGCGTCATATGCTATCGCATCGCAACAAGGCAGTGACGTGTGATGTCTGCGGCGAGGCTTTCCCGGATGGGCGATCACTGATGAACCATAGGCATAGCCACAGCAGTGTATCAGGTCGACAGTTCCCGTGCCGAGAATGCGGTAAAACGTTTGGCTCACGCAGTTCTCAGCAGATCCATATTCGAATCCATACCGGCGAGCGTCCTTACGGCTGCCGATTTTGCTGGAAAGCATTTGCGGATGGCGGTACACTACGCAAACATGAGCGAATTCATACGGGCGAAAAGCCATACGCATGTGCCGTATGTCCGCGCGCCTTCAATCAACGTGTTGTCCTTAGGGAACATATACGGTCGCATCACTCTGGACCGGATCCGAATTATAGCCAGAGTATGACGCCGTATTGTTGCGCCGTGTGCTCCGATATGTTTTCGACGTCTCAGGATCTCATTGTTCACTTGATACATCACTGCGATTTGAATACGGCGATGCGTCGACAGCCGCAAATTGGGCCGCGCAAGTACAAGCGACGGCGTAAGTTGAAGCCACATGAAATGGAGCTTATGACCAATACGCAGTCAATGAATAACACTTATAATAACGAAGAGGAAGTCAATGAGAACATCAACAATGCAATGTTAGAATCGGACGAGGACACCAAAGCAAATATAACCACCATCAAGAAGAAACGGAAAAACTCATCATCGAAGTCACCAGATGAGTCGTATACGGATATGTACAGCAGTTTCTCGACCACTATCGAGAATATTAATACGATTGCCAGTGTCAAGCCCAAAGCGAAGAAAAAGGGAGGAAAGGAACCCGCGACACCGACGTCCTCCCGACCGAAGATGATTCATACCCAGAAGACGCGCGTTGCTGTCGAGAGCAACGAGGGCGGAAAACTTCGACATCGTACGAAGACGATGATTACGCGCACTGAACCTGCGACCGCCGATCGCATTCGGCCGCGAACAAAGAATGTAAGCTATCATGTAATCAATCCGGAGAAGTTACCCATTGCCACTTTCCAAGATGCGACGGAACAAGCTGTAAACAGCTTGTTGGAGTTGAATCCGAATACCGATcatgaagaaattataaatggtACCACCGAAGAGACGTTCCTGTCACCCGAAGAGGAAGCTGAACACGATTCACTGCGAAAGCATAGCTTGAGCATCGATGGAGATATTACGTCACATGCGCAGTCTAGCAATCATAGCTTGGCCCCAGGCAGACATATAATCGGTGACGGGCACGTCGTTAAGTATTTGAGCAGCGGAATTCTCATCAAGAAGGGCATCAAGATTGAGAAAACCGAGCCGCCGGACGAAGATCAACTGTCGCTCGGTGCGGAATTTGTGAATGTCAAGCAGGAGGTAATGGAAAACTTGGAAACTATCGAGACTATGGAGAATATAGACAATATGGTACATATGGATCACTTGGAGAATCCGTTGAATGAGCTGGCCGAATTGTCAATGCAGCACGCTAAGAACATTTTCCGCTGCGAAATGTGTAGTGCGACATTTAGCGATCGCGCAAATTTGCTGCTTCACGTCCCGGTTCATATATGA
Protein Sequence: MEESYTLTWEEAEEVVTSQEVMCDMNNENIITTEETFEDVCEEVVVQSEEVVPDDDVVYLTDNVIVMQDAQELTSDMVQDSTYMDCVTEEVVAEGWEGCNELIVGSEENIGIEEEPAEEDVMIPLPTDQDQYSAMRPYPCDFCSRRFRKKANLMNHMVAHQTDKPHGCNLCGVRYVRKFDLMNHLKIHAYVPETDNLEEELPDDDYDKTRKRMKPNFMTNKKKKKMRGMEDDDGRTTASSSRSYFEEMGVEGEFDSKNILAGETRYIIKTFIYCQLLLLQFVIRYPITDPRKPFVCQYCGVGFAREKALASHSRMHQGDSPFECRRCGEMFWDADLMREHIKDKHDGVEEDFMEEEEFSEEEESKYGEFFCPTCGMTFTRQDQLKRHQQVHIKTEFVTDNEMAHICNVCGESFAEALDLLAHAEIHARSSEFRCMLCGDTTTDEQALAAHVQAKHGDNLPDNTCLHCGRTCKDRRALLTHCLEHSKEKTFPCPKCAKTFHNKARLKRHMLSHRNKAVTCDVCGEAFPDGRSLMNHRHSHSSVSGRQFPCRECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHIRSHHSGPDPNYSQSMTPYCCAVCSDMFSTSQDLIVHLIHHCDLNTAMRRQPQIGPRKYKRRRKLKPHEMELMTNTQSMNNTYNNEEEVNENINNAMLESDEDTKANITTIKKKRKNSSSKSPDESYTDMYSSFSTTIENINTIASVKPKAKKKGGKEPATPTSSRPKMIHTQKTRVAVESNEGGKLRHRTKTMITRTEPATADRIRPRTKNVSYHVINPEKLPIATFQDATEQAVNSLLELNPNTDHEEIINGTTEETFLSPEEEAEHDSLRKHSLSIDGDITSHAQSSNHSLAPGRHIIGDGHVVKYLSSGILIKKGIKIEKTEPPDEDQLSLGAEFVNVKQEVMENLETIETMENIDNMVHMDHLENPLNELAELSMQHAKNIFRCEMCSATFSDRANLLLHVPVHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00049416;
90% Identity: iTF_00049416;
80% Identity: -