Basic Information

Gene Symbol
ncor1
Assembly
GCA_030264675.1
Location
JARJDV010000087.1:663-8906[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.4e-08 1.6e-05 24.8 0.0 4 43 459 498 457 500 0.97

Sequence Information

Coding Sequence
ATGGAAACTGTCCATTCCCTACGGATAGACCATGGAAGCGTGCAAAATGCCAATATGTCGTTTTCGCAACGTCAGCCGCCGACTCACAGGCCAAATCATGCACAACCAGGTGACATGTACAAACCGTCTCGATCGCCGATCGGAGGCGCGACCACGGCAAGCAGGTATCCGCCGTATCCAGCTGCTTCCCCGCAACTGCAGCCGCCGTCGAACCAAAGATACACGCCAGGCGCCGCGCCGGCTGCAGCCGGAGGCGCAGCAGCACCTCCAAGCGGTGCCGCTGGCCCACCGCCAAACTTCACCTACCGCGACAATGTACCACAGAGGATCTCGCTGCTGCCGGCGAGCGAGTACTGTCCGTCACGCAACTCACGCGAGTTCGCGCTGGCgccgcaacagcaacaaatgtTGCACGGGGGCGGCGTGCCACCACTCCCTTCGCATGCCGTTGATCACAATCAGCATGCATTCAAAAAGATAAGACTTCAGGAAAATAAGGACATCCAACCCTTGAGGATTGATACACGGgAACAGCAAGGAGTTTATAATCCTCAAGTAGAAGCAATTTCCCCAACCCTGCCCGACCATATCCAGCAGGAAGATCAGGCGTTCCGTACGACGAAGGATGACCTGCTGCAACAGATTGGCAAGGTGGATCGAGAAATTGCCAAGGCCGAATCGCAAATTAGTATATTGAAGAAAAAGCAACAGGAGCTGGAGGATGTTGCTTCGAAGCCGTCCGTCAGCAAAGAAGTAGAGGAAGATGCGCAACCTAAACATCAGAGCTTGGCGCAAAAGATCTACGCTGAGAACCGCAAACGAGCTCAAAACGCACACGCCAAATTGGATGCGTTTGGACCGAAAGTGGATTGGGCGATTTACAATCAGCCGAGCGATACGGCTATCTATCAGGACAATAAGCGGCGATATGTGGTGTTTAAGAAACGGCTTTTAGACTACTTTAAGCGTCGTCATGCCGAGAAGGACGCTCGCAACACGTACCTCACCGAAACGTACAGTAAACTAATGCAAGAATGGCTAAGGAAAGTTGATAAAATCGAATCGAGTACGAAACGTAAAGCGAAGGAGGCGAAAAATCGAGATTTCTTCGAAAGAGTATTTGTCGAACTTCGGAAACAGCGTGATAAAGAAcgGTTTAGCCGGGTTGGTGCGCGTATCAAATCTGAGGCAGACATGGAAGAGCTGATGGATAATCTACAGGAGCAGGCTATGGAGGATAAGAAGATGCGTAGCTATGCGGTAATTCCGCCCATTCTGCTCGATGCCAAAGAGCGCAAACTTACCTACCAGAACAACAACGGTCATATAGAGGATATGGAGGCTGTGTATAAATCAAGACAGTTCCTTAACGGGTGGACGGCTAGCGAAAAGGAAATTTTTAAGGAAAAGTACCTCCAGCACCCGAAAAACTTTGGAGTTATTGCTTCGTACTTGGATCGCAAGTCGGTATCCGACTGCGTACAGTACTATTATTTGAGCAAAAAGACGGAACATTATAAACAACTTTTACGAAAGACGCGGCTGTGTGCGAGAAGTTTGCGTATACGGAGTTTACGGAACAATCAGCAGCGTGTGAACAGTACCGCGACATCGTTGGCGCAAGTTGATATACTTACAACGGGCGTCACGACGCGCCTGCAGCGGGAGCAGCAACAGAAAACAGGCATTTCGCGCTCTGCACAACAGGCGGCGGCGCCAACCACTGCCACATCGACGCCCTCTGTTGCAGCCACCTCCGGATCGGGTTCTTGTGATAGCGATAAGATTACTGCGTCGACCGCCAATTCAACGGCGGCGACAACTGTAACGAACGCAGTGCGCTCATTGAGTGCAAGTGACGAGCGTAAAACGCCGGAAATCACGAATCATGTCTCAGGCACTGGCACCGCCAATAATACCTCCGCCAGCAAATCAAATAGTAATGATGTTGATGCTGGCGGTAATGGTACATCCGGAGGAACGAATGGTAAAGAATCGGGGAGTTCTGGGAATTTTTGCTTCCCGGAGAACACCATCAATTCAAGCGCGGCGGCGACAGAGAAAAAAGTAGAGTCTGAAGGAGGCACGAAGGATCCTGTGCAAAGCAATGGGACCGATGCTAATGAAGTCCCTACCATTAATGCTCCTTGCGAAACAATCAAGTCTGAACCTATTGATGGAGTTGATGCGATAAGCAGGTAA
Protein Sequence
METVHSLRIDHGSVQNANMSFSQRQPPTHRPNHAQPGDMYKPSRSPIGGATTASRYPPYPAASPQLQPPSNQRYTPGAAPAAAGGAAAPPSGAAGPPPNFTYRDNVPQRISLLPASEYCPSRNSREFALAPQQQQMLHGGGVPPLPSHAVDHNQHAFKKIRLQENKDIQPLRIDTREQQGVYNPQVEAISPTLPDHIQQEDQAFRTTKDDLLQQIGKVDREIAKAESQISILKKKQQELEDVASKPSVSKEVEEDAQPKHQSLAQKIYAENRKRAQNAHAKLDAFGPKVDWAIYNQPSDTAIYQDNKRRYVVFKKRLLDYFKRRHAEKDARNTYLTETYSKLMQEWLRKVDKIESSTKRKAKEAKNRDFFERVFVELRKQRDKERFSRVGARIKSEADMEELMDNLQEQAMEDKKMRSYAVIPPILLDAKERKLTYQNNNGHIEDMEAVYKSRQFLNGWTASEKEIFKEKYLQHPKNFGVIASYLDRKSVSDCVQYYYLSKKTEHYKQLLRKTRLCARSLRIRSLRNNQQRVNSTATSLAQVDILTTGVTTRLQREQQQKTGISRSAQQAAAPTTATSTPSVAATSGSGSCDSDKITASTANSTAATTVTNAVRSLSASDERKTPEITNHVSGTGTANNTSASKSNSNDVDAGGNGTSGGTNGKESGSSGNFCFPENTINSSAAATEKKVESEGGTKDPVQSNGTDANEVPTINAPCETIKSEPIDGVDAISR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00049211;
90% Identity
iTF_00049211;
80% Identity
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